Experiment: Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_573 and Pf1N1B4_574 are separated by 383 nucleotides Pf1N1B4_574 and Pf1N1B4_575 overlap by 4 nucleotides
Pf1N1B4_573 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 666,949 to 667,629
_573
Pf1N1B4_574 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 668,013 to 668,186
_574
Pf1N1B4_575 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 668,183 to 669,700
_575
Position (kb) 668
669 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 667.094 kb on + strand, within Pf1N1B4_573 at 667.094 kb on + strand, within Pf1N1B4_573 at 667.094 kb on + strand, within Pf1N1B4_573 at 667.094 kb on + strand, within Pf1N1B4_573 at 667.118 kb on + strand, within Pf1N1B4_573 at 667.118 kb on + strand at 667.118 kb on + strand, within Pf1N1B4_573 at 667.118 kb on + strand, within Pf1N1B4_573 at 667.118 kb on + strand, within Pf1N1B4_573 at 667.118 kb on + strand, within Pf1N1B4_573 at 667.118 kb on + strand, within Pf1N1B4_573 at 667.118 kb on + strand at 667.118 kb on + strand, within Pf1N1B4_573 at 667.118 kb on + strand, within Pf1N1B4_573 at 667.118 kb on + strand, within Pf1N1B4_573 at 667.118 kb on + strand, within Pf1N1B4_573 at 667.118 kb on + strand, within Pf1N1B4_573 at 667.119 kb on - strand, within Pf1N1B4_573 at 667.119 kb on - strand, within Pf1N1B4_573 at 667.119 kb on - strand, within Pf1N1B4_573 at 667.119 kb on - strand at 667.119 kb on - strand, within Pf1N1B4_573 at 667.119 kb on - strand, within Pf1N1B4_573 at 667.119 kb on - strand, within Pf1N1B4_573 at 667.119 kb on - strand, within Pf1N1B4_573 at 667.119 kb on - strand, within Pf1N1B4_573 at 667.119 kb on - strand, within Pf1N1B4_573 at 667.119 kb on - strand, within Pf1N1B4_573 at 667.119 kb on - strand, within Pf1N1B4_573 at 667.304 kb on + strand, within Pf1N1B4_573 at 667.304 kb on + strand, within Pf1N1B4_573 at 667.304 kb on + strand, within Pf1N1B4_573 at 667.304 kb on + strand, within Pf1N1B4_573 at 667.304 kb on + strand, within Pf1N1B4_573 at 667.305 kb on - strand, within Pf1N1B4_573 at 667.305 kb on - strand, within Pf1N1B4_573 at 667.305 kb on - strand at 667.317 kb on + strand, within Pf1N1B4_573 at 667.318 kb on - strand, within Pf1N1B4_573 at 667.422 kb on + strand, within Pf1N1B4_573 at 667.422 kb on + strand, within Pf1N1B4_573 at 667.422 kb on + strand, within Pf1N1B4_573 at 667.423 kb on - strand, within Pf1N1B4_573 at 667.436 kb on + strand, within Pf1N1B4_573 at 667.436 kb on + strand, within Pf1N1B4_573 at 667.436 kb on + strand, within Pf1N1B4_573 at 667.436 kb on + strand, within Pf1N1B4_573 at 667.436 kb on + strand, within Pf1N1B4_573 at 667.436 kb on + strand, within Pf1N1B4_573 at 667.436 kb on + strand, within Pf1N1B4_573 at 667.437 kb on - strand, within Pf1N1B4_573 at 667.437 kb on - strand, within Pf1N1B4_573 at 667.463 kb on + strand, within Pf1N1B4_573 at 667.463 kb on + strand, within Pf1N1B4_573 at 667.463 kb on + strand, within Pf1N1B4_573 at 667.464 kb on - strand, within Pf1N1B4_573 at 667.475 kb on + strand, within Pf1N1B4_573 at 667.475 kb on + strand, within Pf1N1B4_573 at 667.475 kb on + strand at 667.475 kb on + strand, within Pf1N1B4_573 at 667.475 kb on + strand, within Pf1N1B4_573 at 667.475 kb on + strand, within Pf1N1B4_573 at 667.475 kb on + strand, within Pf1N1B4_573 at 667.475 kb on + strand, within Pf1N1B4_573 at 667.476 kb on - strand, within Pf1N1B4_573 at 667.476 kb on - strand at 667.476 kb on - strand, within Pf1N1B4_573 at 667.476 kb on - strand, within Pf1N1B4_573 at 667.476 kb on - strand, within Pf1N1B4_573 at 667.476 kb on - strand, within Pf1N1B4_573 at 667.476 kb on - strand, within Pf1N1B4_573 at 667.476 kb on - strand, within Pf1N1B4_573 at 667.476 kb on - strand, within Pf1N1B4_573 at 667.476 kb on - strand, within Pf1N1B4_573 at 667.554 kb on + strand at 667.554 kb on + strand, within Pf1N1B4_573 at 667.555 kb on - strand, within Pf1N1B4_573 at 667.562 kb on + strand at 667.601 kb on + strand at 667.601 kb on + strand at 667.602 kb on - strand at 667.605 kb on + strand at 667.605 kb on + strand at 667.605 kb on + strand at 667.605 kb on + strand at 667.605 kb on + strand at 667.605 kb on + strand at 667.605 kb on + strand at 667.605 kb on + strand at 667.605 kb on + strand at 667.605 kb on + strand at 667.605 kb on + strand at 667.605 kb on + strand at 667.605 kb on + strand at 667.605 kb on + strand at 667.605 kb on + strand at 667.606 kb on - strand at 667.606 kb on - strand at 667.606 kb on - strand at 667.606 kb on - strand at 667.606 kb on - strand at 667.606 kb on - strand at 667.606 kb on - strand at 667.606 kb on - strand at 667.606 kb on - strand at 667.608 kb on - strand at 667.662 kb on + strand at 667.662 kb on + strand at 667.662 kb on + strand at 667.680 kb on + strand at 667.680 kb on + strand at 667.680 kb on + strand at 667.680 kb on + strand at 667.680 kb on + strand at 667.680 kb on + strand at 667.680 kb on + strand at 667.680 kb on + strand at 667.680 kb on + strand at 667.680 kb on + strand at 667.680 kb on + strand at 667.681 kb on - strand at 667.681 kb on - strand at 667.683 kb on + strand at 667.683 kb on + strand at 667.683 kb on + strand at 667.715 kb on + strand at 667.715 kb on + strand at 667.715 kb on + strand at 667.715 kb on + strand at 667.715 kb on + strand at 667.715 kb on + strand at 667.715 kb on + strand at 667.715 kb on + strand at 667.715 kb on + strand at 667.715 kb on + strand at 667.715 kb on + strand at 667.715 kb on + strand at 667.715 kb on + strand at 667.715 kb on + strand at 667.715 kb on + strand at 667.715 kb on + strand at 667.716 kb on - strand at 667.720 kb on + strand at 667.720 kb on + strand at 667.720 kb on + strand at 667.720 kb on + strand at 667.720 kb on + strand at 667.720 kb on + strand at 667.720 kb on + strand at 667.720 kb on + strand at 667.751 kb on + strand at 667.751 kb on + strand at 667.751 kb on + strand at 667.751 kb on + strand at 667.751 kb on + strand at 667.751 kb on + strand at 667.751 kb on + strand at 667.751 kb on + strand at 667.751 kb on + strand at 667.774 kb on + strand at 667.793 kb on + strand at 667.793 kb on + strand at 667.795 kb on + strand at 667.795 kb on + strand at 667.795 kb on + strand at 667.795 kb on + strand at 667.796 kb on - strand at 667.796 kb on - strand at 667.825 kb on + strand at 667.826 kb on - strand at 667.849 kb on + strand at 667.849 kb on + strand at 667.849 kb on + strand at 667.891 kb on + strand at 667.891 kb on + strand at 667.891 kb on + strand at 667.957 kb on + strand at 667.957 kb on + strand at 667.957 kb on + strand at 667.958 kb on - strand at 668.105 kb on - strand, within Pf1N1B4_574 at 668.128 kb on + strand, within Pf1N1B4_574 at 668.128 kb on + strand, within Pf1N1B4_574 at 668.809 kb on + strand, within Pf1N1B4_575 at 668.809 kb on + strand, within Pf1N1B4_575 at 668.889 kb on + strand at 668.889 kb on + strand, within Pf1N1B4_575 at 668.889 kb on + strand, within Pf1N1B4_575 at 668.889 kb on + strand, within Pf1N1B4_575 at 668.889 kb on + strand, within Pf1N1B4_575 at 668.889 kb on + strand, within Pf1N1B4_575 at 668.889 kb on + strand, within Pf1N1B4_575 at 668.889 kb on + strand, within Pf1N1B4_575 at 668.889 kb on + strand, within Pf1N1B4_575 at 668.889 kb on + strand, within Pf1N1B4_575 at 668.889 kb on + strand, within Pf1N1B4_575 at 668.889 kb on + strand, within Pf1N1B4_575 at 668.889 kb on + strand, within Pf1N1B4_575 at 668.889 kb on + strand, within Pf1N1B4_575 at 668.889 kb on + strand, within Pf1N1B4_575 at 668.890 kb on - strand, within Pf1N1B4_575 at 668.890 kb on - strand, within Pf1N1B4_575 at 668.890 kb on - strand, within Pf1N1B4_575 at 668.890 kb on - strand, within Pf1N1B4_575 at 668.890 kb on - strand, within Pf1N1B4_575 at 668.890 kb on - strand at 668.890 kb on - strand, within Pf1N1B4_575 at 668.893 kb on + strand, within Pf1N1B4_575 at 668.893 kb on + strand, within Pf1N1B4_575 at 668.893 kb on + strand, within Pf1N1B4_575 at 668.893 kb on + strand, within Pf1N1B4_575 at 668.893 kb on + strand, within Pf1N1B4_575 at 668.894 kb on - strand, within Pf1N1B4_575 at 668.894 kb on - strand, within Pf1N1B4_575 at 668.894 kb on - strand, within Pf1N1B4_575 at 668.894 kb on - strand at 668.894 kb on - strand, within Pf1N1B4_575 at 668.894 kb on - strand, within Pf1N1B4_575 at 668.894 kb on - strand, within Pf1N1B4_575 at 668.894 kb on - strand, within Pf1N1B4_575 at 668.894 kb on - strand, within Pf1N1B4_575 at 668.894 kb on - strand, within Pf1N1B4_575 at 668.894 kb on - strand, within Pf1N1B4_575 at 668.894 kb on - strand, within Pf1N1B4_575 at 668.894 kb on - strand, within Pf1N1B4_575 at 668.899 kb on - strand, within Pf1N1B4_575 at 668.899 kb on - strand, within Pf1N1B4_575 at 668.899 kb on - strand, within Pf1N1B4_575 at 669.060 kb on + strand, within Pf1N1B4_575 at 669.149 kb on - strand, within Pf1N1B4_575 at 669.149 kb on - strand, within Pf1N1B4_575 at 669.149 kb on - strand, within Pf1N1B4_575 at 669.166 kb on - strand, within Pf1N1B4_575 at 669.166 kb on - strand, within Pf1N1B4_575
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 200 mM remove 667,094 + Pf1N1B4_573 0.21 +0.3 667,094 + Pf1N1B4_573 0.21 -0.6 667,094 + Pf1N1B4_573 0.21 +0.9 667,094 + Pf1N1B4_573 0.21 +0.3 667,118 + Pf1N1B4_573 0.25 +0.1 667,118 + -0.1 667,118 + Pf1N1B4_573 0.25 +0.1 667,118 + Pf1N1B4_573 0.25 -0.7 667,118 + Pf1N1B4_573 0.25 -2.0 667,118 + Pf1N1B4_573 0.25 -1.0 667,118 + Pf1N1B4_573 0.25 -0.7 667,118 + -1.1 667,118 + Pf1N1B4_573 0.25 -1.0 667,118 + Pf1N1B4_573 0.25 -0.9 667,118 + Pf1N1B4_573 0.25 -1.4 667,118 + Pf1N1B4_573 0.25 -1.9 667,118 + Pf1N1B4_573 0.25 +0.3 667,119 - Pf1N1B4_573 0.25 +1.3 667,119 - Pf1N1B4_573 0.25 +0.0 667,119 - Pf1N1B4_573 0.25 -0.7 667,119 - -0.1 667,119 - Pf1N1B4_573 0.25 -0.2 667,119 - Pf1N1B4_573 0.25 +1.5 667,119 - Pf1N1B4_573 0.25 -0.7 667,119 - Pf1N1B4_573 0.25 -0.5 667,119 - Pf1N1B4_573 0.25 +0.3 667,119 - Pf1N1B4_573 0.25 +1.1 667,119 - Pf1N1B4_573 0.25 +1.5 667,119 - Pf1N1B4_573 0.25 -0.1 667,304 + Pf1N1B4_573 0.52 -0.7 667,304 + Pf1N1B4_573 0.52 +1.2 667,304 + Pf1N1B4_573 0.52 +0.1 667,304 + Pf1N1B4_573 0.52 +0.5 667,304 + Pf1N1B4_573 0.52 -0.3 667,305 - Pf1N1B4_573 0.52 -1.4 667,305 - Pf1N1B4_573 0.52 +0.2 667,305 - -0.7 667,317 + Pf1N1B4_573 0.54 +0.1 667,318 - Pf1N1B4_573 0.54 +0.4 667,422 + Pf1N1B4_573 0.69 -1.1 667,422 + Pf1N1B4_573 0.69 +1.9 667,422 + Pf1N1B4_573 0.69 +0.3 667,423 - Pf1N1B4_573 0.70 -0.7 667,436 + Pf1N1B4_573 0.72 -0.4 667,436 + Pf1N1B4_573 0.72 +0.9 667,436 + Pf1N1B4_573 0.72 +0.3 667,436 + Pf1N1B4_573 0.72 -1.1 667,436 + Pf1N1B4_573 0.72 +0.9 667,436 + Pf1N1B4_573 0.72 +0.9 667,436 + Pf1N1B4_573 0.72 +0.6 667,437 - Pf1N1B4_573 0.72 -0.5 667,437 - Pf1N1B4_573 0.72 -2.1 667,463 + Pf1N1B4_573 0.75 -0.0 667,463 + Pf1N1B4_573 0.75 -2.1 667,463 + Pf1N1B4_573 0.75 -0.6 667,464 - Pf1N1B4_573 0.76 -1.2 667,475 + Pf1N1B4_573 0.77 -1.1 667,475 + Pf1N1B4_573 0.77 -0.9 667,475 + +1.7 667,475 + Pf1N1B4_573 0.77 +0.9 667,475 + Pf1N1B4_573 0.77 -0.8 667,475 + Pf1N1B4_573 0.77 +1.0 667,475 + Pf1N1B4_573 0.77 -0.3 667,475 + Pf1N1B4_573 0.77 -1.4 667,476 - Pf1N1B4_573 0.77 +0.9 667,476 - +0.5 667,476 - Pf1N1B4_573 0.77 +0.1 667,476 - Pf1N1B4_573 0.77 -1.9 667,476 - Pf1N1B4_573 0.77 -1.1 667,476 - Pf1N1B4_573 0.77 +1.1 667,476 - Pf1N1B4_573 0.77 -0.9 667,476 - Pf1N1B4_573 0.77 +0.5 667,476 - Pf1N1B4_573 0.77 +0.2 667,476 - Pf1N1B4_573 0.77 +0.9 667,554 + +0.9 667,554 + Pf1N1B4_573 0.89 +0.9 667,555 - Pf1N1B4_573 0.89 +1.3 667,562 + +0.9 667,601 + -0.8 667,601 + -0.1 667,602 - -0.4 667,605 + -0.1 667,605 + -1.0 667,605 + +1.3 667,605 + -0.7 667,605 + +0.0 667,605 + +0.2 667,605 + -0.3 667,605 + -2.3 667,605 + +0.5 667,605 + +0.4 667,605 + -0.9 667,605 + +0.5 667,605 + +0.3 667,605 + -0.8 667,605 + +0.1 667,606 - -1.4 667,606 - -0.3 667,606 - +0.2 667,606 - +1.9 667,606 - +0.6 667,606 - -0.7 667,606 - +0.0 667,606 - +0.4 667,606 - -0.1 667,608 - -0.4 667,662 + +0.7 667,662 + -0.5 667,662 + -0.7 667,680 + -2.3 667,680 + -1.4 667,680 + -0.5 667,680 + -0.7 667,680 + +0.6 667,680 + -0.3 667,680 + +0.1 667,680 + -1.8 667,680 + +0.6 667,680 + -2.3 667,680 + +1.9 667,681 - +1.3 667,681 - -0.5 667,683 + -0.9 667,683 + -1.1 667,683 + +0.2 667,715 + -0.6 667,715 + +1.5 667,715 + +0.9 667,715 + -0.4 667,715 + +0.4 667,715 + +0.2 667,715 + +0.3 667,715 + -0.1 667,715 + -1.0 667,715 + +0.1 667,715 + -1.9 667,715 + +0.6 667,715 + +0.2 667,715 + -0.3 667,715 + +0.2 667,715 + -2.8 667,716 - -0.4 667,720 + -1.1 667,720 + -0.1 667,720 + +1.5 667,720 + -0.9 667,720 + +2.5 667,720 + -1.2 667,720 + +0.9 667,720 + +0.2 667,751 + -0.1 667,751 + -2.4 667,751 + +0.3 667,751 + -0.6 667,751 + -1.4 667,751 + -0.1 667,751 + +0.5 667,751 + -0.7 667,751 + +0.2 667,774 + +0.4 667,793 + +0.1 667,793 + -0.1 667,795 + -0.7 667,795 + +0.7 667,795 + +0.5 667,795 + -1.4 667,796 - -1.1 667,796 - +1.5 667,825 + -1.4 667,826 - +1.1 667,849 + -0.7 667,849 + +0.2 667,849 + +1.2 667,891 + +0.3 667,891 + -0.9 667,891 + -0.1 667,957 + -1.7 667,957 + -1.0 667,957 + -0.2 667,958 - -1.1 668,105 - Pf1N1B4_574 0.53 -0.7 668,128 + Pf1N1B4_574 0.66 +0.3 668,128 + Pf1N1B4_574 0.66 -1.8 668,809 + Pf1N1B4_575 0.41 +0.8 668,809 + Pf1N1B4_575 0.41 +0.5 668,889 + +0.3 668,889 + Pf1N1B4_575 0.47 -1.1 668,889 + Pf1N1B4_575 0.47 +0.7 668,889 + Pf1N1B4_575 0.47 +0.3 668,889 + Pf1N1B4_575 0.47 +2.5 668,889 + Pf1N1B4_575 0.47 -0.7 668,889 + Pf1N1B4_575 0.47 +0.9 668,889 + Pf1N1B4_575 0.47 -0.1 668,889 + Pf1N1B4_575 0.47 +0.2 668,889 + Pf1N1B4_575 0.47 -1.9 668,889 + Pf1N1B4_575 0.47 +0.9 668,889 + Pf1N1B4_575 0.47 +1.5 668,889 + Pf1N1B4_575 0.47 -0.1 668,889 + Pf1N1B4_575 0.47 -1.4 668,889 + Pf1N1B4_575 0.47 +3.2 668,890 - Pf1N1B4_575 0.47 +0.4 668,890 - Pf1N1B4_575 0.47 -0.1 668,890 - Pf1N1B4_575 0.47 +0.9 668,890 - Pf1N1B4_575 0.47 -1.9 668,890 - Pf1N1B4_575 0.47 -0.4 668,890 - -0.7 668,890 - Pf1N1B4_575 0.47 -0.1 668,893 + Pf1N1B4_575 0.47 -2.1 668,893 + Pf1N1B4_575 0.47 -0.1 668,893 + Pf1N1B4_575 0.47 -0.7 668,893 + Pf1N1B4_575 0.47 -0.4 668,893 + Pf1N1B4_575 0.47 -0.3 668,894 - Pf1N1B4_575 0.47 +0.9 668,894 - Pf1N1B4_575 0.47 -0.7 668,894 - Pf1N1B4_575 0.47 -0.9 668,894 - +0.9 668,894 - Pf1N1B4_575 0.47 -1.9 668,894 - Pf1N1B4_575 0.47 +0.1 668,894 - Pf1N1B4_575 0.47 -0.7 668,894 - Pf1N1B4_575 0.47 -1.1 668,894 - Pf1N1B4_575 0.47 +0.4 668,894 - Pf1N1B4_575 0.47 -0.3 668,894 - Pf1N1B4_575 0.47 +1.4 668,894 - Pf1N1B4_575 0.47 -0.9 668,894 - Pf1N1B4_575 0.47 +1.2 668,899 - Pf1N1B4_575 0.47 -0.3 668,899 - Pf1N1B4_575 0.47 +0.9 668,899 - Pf1N1B4_575 0.47 +0.5 669,060 + Pf1N1B4_575 0.58 -0.6 669,149 - Pf1N1B4_575 0.64 +0.7 669,149 - Pf1N1B4_575 0.64 -1.1 669,149 - Pf1N1B4_575 0.64 -0.2 669,166 - Pf1N1B4_575 0.65 -0.7 669,166 - Pf1N1B4_575 0.65 -1.0
Or see this region's nucleotide sequence