Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1692

Experiment: Chloride 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloride 200 mM
1,937,676	+		Pf1N1B4_1690	0.15	-1.3
1,937,676	+		Pf1N1B4_1690	0.15	-1.7
1,937,677	-		Pf1N1B4_1690	0.15	-1.4
1,937,677	-		Pf1N1B4_1690	0.15	-2.0
1,937,782	-		Pf1N1B4_1690	0.27	-1.2
1,937,782	-		Pf1N1B4_1690	0.27	-0.1
1,937,782	-		Pf1N1B4_1690	0.27	-0.4
1,938,056	+		Pf1N1B4_1690	0.56	+0.9
1,938,057	-		Pf1N1B4_1690	0.56	+1.0
1,938,237	+		Pf1N1B4_1690	0.76	-0.5
1,938,238	-		Pf1N1B4_1690	0.76	+1.4
1,938,238	-		Pf1N1B4_1690	0.76	-1.1
1,938,238	-		Pf1N1B4_1690	0.76	-0.4
1,938,512	+		Pf1N1B4_1691	0.63	+0.1
1,938,512	+		Pf1N1B4_1691	0.63	-1.2
1,938,512	+		Pf1N1B4_1691	0.63	-1.1
1,938,541	+		Pf1N1B4_1691	0.89	-0.1
1,938,572	+				-0.1
1,938,576	+				+0.1
1,938,601	+				+0.6
1,938,601	+				+0.9
1,938,602	-				-0.6
1,938,615	+				-0.3
1,938,615	+				-0.1
1,938,615	+				+0.9
1,938,615	+				+0.6
1,938,615	+				-1.1
1,938,615	+				+0.4
1,938,615	+				+0.4
1,938,616	-				+0.0
1,938,616	-				-0.3
1,938,616	-				+0.7
1,938,616	-				-1.2
1,938,617	+				+0.3
1,938,617	+				+0.0
1,938,756	+		Pf1N1B4_1692	0.11	+1.9
1,938,756	+		Pf1N1B4_1692	0.11	+1.4
1,938,756	+		Pf1N1B4_1692	0.11	+1.4
1,938,757	-		Pf1N1B4_1692	0.11	+0.8
1,938,757	-				-0.9
1,938,757	-		Pf1N1B4_1692	0.11	-0.4
1,938,757	-		Pf1N1B4_1692	0.11	+1.4
1,938,757	-		Pf1N1B4_1692	0.11	+0.7
1,938,757	-				+0.9
1,938,757	-		Pf1N1B4_1692	0.11	+1.0
1,938,757	-		Pf1N1B4_1692	0.11	-0.1
1,938,819	+		Pf1N1B4_1692	0.17	+1.0
1,938,854	+		Pf1N1B4_1692	0.20	+1.4
1,938,854	+		Pf1N1B4_1692	0.20	+0.7
1,938,854	+		Pf1N1B4_1692	0.20	-2.0
1,938,854	+		Pf1N1B4_1692	0.20	+0.9
1,938,854	+		Pf1N1B4_1692	0.20	-0.3
1,938,854	+		Pf1N1B4_1692	0.20	+1.4
1,938,855	-		Pf1N1B4_1692	0.21	-0.0
1,938,855	-		Pf1N1B4_1692	0.21	+0.3
1,938,978	+		Pf1N1B4_1692	0.33	+0.4
1,938,978	+		Pf1N1B4_1692	0.33	+1.0
1,938,978	+		Pf1N1B4_1692	0.33	-1.9
1,938,978	+		Pf1N1B4_1692	0.33	+0.4
1,938,978	+		Pf1N1B4_1692	0.33	-0.2
1,938,978	+		Pf1N1B4_1692	0.33	-0.6
1,938,978	+		Pf1N1B4_1692	0.33	+0.2
1,938,978	+		Pf1N1B4_1692	0.33	+1.0
1,938,978	+		Pf1N1B4_1692	0.33	+1.2
1,938,978	+		Pf1N1B4_1692	0.33	+0.3
1,938,978	+		Pf1N1B4_1692	0.33	+2.2
1,938,978	+		Pf1N1B4_1692	0.33	+2.0
1,938,979	-		Pf1N1B4_1692	0.33	-1.4
1,938,979	-		Pf1N1B4_1692	0.33	+0.1
1,938,979	-		Pf1N1B4_1692	0.33	-0.1
1,938,979	-		Pf1N1B4_1692	0.33	-0.1
1,938,979	-		Pf1N1B4_1692	0.33	-0.1
1,938,979	-		Pf1N1B4_1692	0.33	+1.0
1,938,979	-		Pf1N1B4_1692	0.33	+0.7
1,938,979	-		Pf1N1B4_1692	0.33	+0.9
1,938,979	-		Pf1N1B4_1692	0.33	+1.4
1,938,979	-		Pf1N1B4_1692	0.33	+0.1
1,938,979	-		Pf1N1B4_1692	0.33	+0.4
1,938,981	-		Pf1N1B4_1692	0.33	+3.0
1,939,110	+		Pf1N1B4_1692	0.46	-0.5
1,939,111	-		Pf1N1B4_1692	0.46	+2.0
1,939,111	-		Pf1N1B4_1692	0.46	+0.4
1,939,111	-				+1.4
1,939,155	+		Pf1N1B4_1692	0.51	-0.1
1,939,156	-		Pf1N1B4_1692	0.51	-0.4
1,939,156	-		Pf1N1B4_1692	0.51	-0.8
1,939,425	+		Pf1N1B4_1692	0.78	+0.2
1,939,425	+		Pf1N1B4_1692	0.78	-0.7
1,939,425	+		Pf1N1B4_1692	0.78	+1.2
1,939,425	+		Pf1N1B4_1692	0.78	+0.7
1,939,425	+		Pf1N1B4_1692	0.78	+0.4
1,939,425	+		Pf1N1B4_1692	0.78	-1.4
1,939,426	-		Pf1N1B4_1692	0.78	+0.6
1,939,426	-		Pf1N1B4_1692	0.78	-0.1
1,939,518	+		Pf1N1B4_1692	0.87	-0.3
1,939,518	+		Pf1N1B4_1692	0.87	+0.9
1,939,518	+		Pf1N1B4_1692	0.87	-0.3
1,939,518	+		Pf1N1B4_1692	0.87	+1.0
1,939,519	-		Pf1N1B4_1692	0.87	-2.1
1,939,519	-		Pf1N1B4_1692	0.87	+0.1
1,939,519	-				-1.1
1,939,519	-		Pf1N1B4_1692	0.87	+0.9
1,939,626	+				+1.2
1,939,627	-				-1.4
1,939,627	-				-1.0
1,939,642	-				-0.0
1,939,642	-				+0.2
1,939,784	-				+1.4
1,939,812	+				+0.2
1,939,812	+				+1.0
1,939,812	+				-1.6
1,939,812	+				-0.4
1,939,812	+				+0.1
1,939,812	+				-1.1
1,939,812	+				+0.4
1,939,812	+				-0.4
1,939,812	+				-0.6
1,939,812	+				-1.3
1,939,812	+				+0.2
1,939,812	+				-1.3
1,939,812	+				-0.4
1,939,812	+				-0.2
1,939,812	+				-0.1
1,939,812	+				-0.1
1,939,812	+				-0.6
1,939,812	+				-0.1
1,939,812	+				-1.9
1,939,812	+				+0.9
1,939,812	+				-1.6
1,939,812	+				-2.3
1,939,812	+				-0.1
1,939,812	+				+0.3
1,939,812	+				-1.0
1,939,812	+				-0.8
1,939,812	+				-0.1
1,939,812	+				+0.6
1,939,812	+				-0.6
1,939,812	+				-0.6
1,939,812	+				-0.8
1,939,812	+				-0.3
1,939,812	+				-0.5
1,939,812	+				+0.3
1,939,812	+				+1.1
1,939,813	-				+0.9
1,939,813	-				-1.4
1,939,813	-				-0.5
1,939,813	-				-1.4
1,939,813	-				-0.3
1,939,813	-				+0.1
1,939,813	-				-0.6
1,939,813	-				+0.1
1,939,813	-				+0.2
1,939,813	-				-1.0
1,939,813	-				+1.0
1,939,813	-				+0.4
1,939,813	-				-0.1
1,939,813	-				-0.6
1,939,813	-				+0.2
1,939,813	-				-0.1
1,939,813	-				-1.1
1,939,813	-				+0.2
1,939,814	+				-2.4
1,939,814	+				+0.0
1,939,814	+				+0.4
1,939,814	+				-1.2
1,939,814	+				+0.3
1,939,814	+				-0.3
1,939,814	+				+0.8
1,939,814	+				-0.2
1,939,814	+				-0.9
1,939,814	+				+1.9
1,939,814	+				-0.9
1,939,814	+				-0.7
1,939,815	-				+0.8
1,939,815	-				+1.4
1,939,815	-				-0.1
1,939,815	-				+0.0
1,939,849	+				-0.0
1,939,849	+				-1.9
1,939,860	-				-0.5
1,939,959	+				-0.6
1,939,959	+				-0.6
1,939,960	-				-1.6
1,939,960	-				-0.5
1,939,960	-				+1.4
1,939,960	-				+0.4
1,939,960	-				+1.0
1,940,090	+		Pf1N1B4_1693	0.18	-0.1
1,940,090	+		Pf1N1B4_1693	0.18	+1.2
1,940,091	-		Pf1N1B4_1693	0.19	-2.0
1,940,091	-		Pf1N1B4_1693	0.19	+0.1
1,940,091	-		Pf1N1B4_1693	0.19	+0.0
1,940,291	+		Pf1N1B4_1693	0.44	-1.4
1,940,291	+		Pf1N1B4_1693	0.44	-0.6
1,940,291	+		Pf1N1B4_1693	0.44	+0.4
1,940,292	-		Pf1N1B4_1693	0.44	+0.1
1,940,292	-		Pf1N1B4_1693	0.44	-0.9
1,940,309	+		Pf1N1B4_1693	0.46	+0.7
1,940,400	+		Pf1N1B4_1693	0.57	-1.2
1,940,417	+		Pf1N1B4_1693	0.60	-0.7
1,940,417	+		Pf1N1B4_1693	0.60	+0.1
1,940,417	+		Pf1N1B4_1693	0.60	-0.1
1,940,417	+		Pf1N1B4_1693	0.60	-0.4
1,940,417	+		Pf1N1B4_1693	0.60	-0.9
1,940,418	-		Pf1N1B4_1693	0.60	-0.7
1,940,418	-		Pf1N1B4_1693	0.60	+0.2
1,940,418	-		Pf1N1B4_1693	0.60	-0.1
1,940,418	-		Pf1N1B4_1693	0.60	-0.6
1,940,418	-		Pf1N1B4_1693	0.60	+1.1
1,940,446	+				-0.9
1,940,446	+		Pf1N1B4_1693	0.63	-1.0
1,940,446	+		Pf1N1B4_1693	0.63	-0.1
1,940,447	-		Pf1N1B4_1693	0.63	-0.9
1,940,465	+		Pf1N1B4_1693	0.66	-1.7
1,940,465	+		Pf1N1B4_1693	0.66	+0.2
1,940,465	+		Pf1N1B4_1693	0.66	+0.0
1,940,465	+		Pf1N1B4_1693	0.66	+0.1
1,940,465	+				+1.4
1,940,465	+		Pf1N1B4_1693	0.66	-0.1
1,940,466	-		Pf1N1B4_1693	0.66	-0.3
1,940,466	-		Pf1N1B4_1693	0.66	-0.5