Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS22050

Experiment: Paraquat dichloride 0.2 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS22045 and ABZR86_RS22050 are separated by 106 nucleotidesABZR86_RS22050 and ABZR86_RS22055 are separated by 69 nucleotides ABZR86_RS22045: ABZR86_RS22045 - tetratricopeptide repeat protein, at 370,728 to 372,464 _RS22045 ABZR86_RS22050: ABZR86_RS22050 - glutamyl-tRNA reductase, at 372,571 to 373,845 _RS22050 ABZR86_RS22055: ABZR86_RS22055 - peptide chain release factor 1, at 373,915 to 374,988 _RS22055 Position (kb) 372 373 374Strain fitness (log2 ratio) -1 0 1 2at 371.587 kb on + strand, within ABZR86_RS22045at 371.587 kb on + strand, within ABZR86_RS22045at 371.587 kb on + strand, within ABZR86_RS22045at 371.588 kb on - strand, within ABZR86_RS22045at 371.588 kb on - strand, within ABZR86_RS22045at 371.638 kb on + strand, within ABZR86_RS22045at 371.638 kb on + strand, within ABZR86_RS22045at 371.639 kb on - strand, within ABZR86_RS22045at 371.639 kb on - strand, within ABZR86_RS22045at 371.639 kb on - strand, within ABZR86_RS22045at 371.639 kb on - strand, within ABZR86_RS22045at 371.668 kb on + strand, within ABZR86_RS22045at 371.669 kb on - strand, within ABZR86_RS22045at 371.755 kb on + strand, within ABZR86_RS22045at 371.779 kb on + strand, within ABZR86_RS22045at 371.779 kb on + strand, within ABZR86_RS22045at 371.779 kb on + strand, within ABZR86_RS22045at 371.779 kb on + strand, within ABZR86_RS22045at 371.779 kb on + strand, within ABZR86_RS22045at 371.779 kb on + strand, within ABZR86_RS22045at 371.779 kb on + strand, within ABZR86_RS22045at 371.779 kb on + strand, within ABZR86_RS22045at 371.779 kb on + strand, within ABZR86_RS22045at 371.779 kb on + strand, within ABZR86_RS22045at 371.779 kb on + strand, within ABZR86_RS22045at 371.780 kb on - strand, within ABZR86_RS22045at 371.780 kb on - strand, within ABZR86_RS22045at 371.780 kb on - strand, within ABZR86_RS22045at 371.780 kb on - strand, within ABZR86_RS22045at 371.780 kb on - strand, within ABZR86_RS22045at 371.780 kb on - strand, within ABZR86_RS22045at 371.780 kb on - strand, within ABZR86_RS22045at 371.780 kb on - strand, within ABZR86_RS22045at 371.780 kb on - strand, within ABZR86_RS22045at 371.780 kb on - strand, within ABZR86_RS22045at 371.780 kb on - strand, within ABZR86_RS22045at 371.780 kb on - strand, within ABZR86_RS22045at 371.780 kb on - strand, within ABZR86_RS22045at 371.834 kb on - strand, within ABZR86_RS22045at 372.223 kb on + strand, within ABZR86_RS22045at 372.223 kb on + strand, within ABZR86_RS22045at 372.224 kb on - strand, within ABZR86_RS22045at 372.467 kb on + strandat 372.467 kb on + strandat 372.468 kb on - strandat 372.468 kb on - strandat 372.468 kb on - strandat 372.468 kb on - strandat 372.487 kb on + strandat 372.487 kb on + strandat 372.487 kb on + strandat 372.487 kb on + strandat 372.527 kb on + strandat 372.527 kb on + strandat 372.527 kb on + strandat 372.527 kb on + strandat 372.528 kb on - strandat 372.532 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Paraquat dichloride 0.2 mg/ml
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371,587 + ABZR86_RS22045 0.49 +0.2
371,587 + ABZR86_RS22045 0.49 +0.5
371,587 + ABZR86_RS22045 0.49 +0.3
371,588 - ABZR86_RS22045 0.50 +0.6
371,588 - ABZR86_RS22045 0.50 -0.0
371,638 + ABZR86_RS22045 0.52 +0.1
371,638 + ABZR86_RS22045 0.52 -0.2
371,639 - ABZR86_RS22045 0.52 +0.6
371,639 - ABZR86_RS22045 0.52 +1.1
371,639 - ABZR86_RS22045 0.52 +1.0
371,639 - ABZR86_RS22045 0.52 +0.5
371,668 + ABZR86_RS22045 0.54 +0.7
371,669 - ABZR86_RS22045 0.54 +0.4
371,755 + ABZR86_RS22045 0.59 +1.0
371,779 + ABZR86_RS22045 0.61 -0.2
371,779 + ABZR86_RS22045 0.61 -0.0
371,779 + ABZR86_RS22045 0.61 +0.3
371,779 + ABZR86_RS22045 0.61 +0.4
371,779 + ABZR86_RS22045 0.61 -0.3
371,779 + ABZR86_RS22045 0.61 +0.4
371,779 + ABZR86_RS22045 0.61 +0.8
371,779 + ABZR86_RS22045 0.61 -0.6
371,779 + ABZR86_RS22045 0.61 -0.4
371,779 + ABZR86_RS22045 0.61 +0.1
371,779 + ABZR86_RS22045 0.61 +0.2
371,780 - ABZR86_RS22045 0.61 +0.9
371,780 - ABZR86_RS22045 0.61 +0.8
371,780 - ABZR86_RS22045 0.61 +2.0
371,780 - ABZR86_RS22045 0.61 +0.2
371,780 - ABZR86_RS22045 0.61 +0.8
371,780 - ABZR86_RS22045 0.61 +0.7
371,780 - ABZR86_RS22045 0.61 +0.9
371,780 - ABZR86_RS22045 0.61 +0.3
371,780 - ABZR86_RS22045 0.61 -0.0
371,780 - ABZR86_RS22045 0.61 +0.1
371,780 - ABZR86_RS22045 0.61 +0.2
371,780 - ABZR86_RS22045 0.61 +0.7
371,780 - ABZR86_RS22045 0.61 +0.4
371,834 - ABZR86_RS22045 0.64 +1.2
372,223 + ABZR86_RS22045 0.86 +0.6
372,223 + ABZR86_RS22045 0.86 -0.2
372,224 - ABZR86_RS22045 0.86 +0.6
372,467 + -1.5
372,467 + -1.1
372,468 - -0.5
372,468 - +0.4
372,468 - +0.4
372,468 - +0.1
372,487 + +0.3
372,487 + +0.2
372,487 + +1.0
372,487 + -0.7
372,527 + -0.3
372,527 + +0.4
372,527 + +0.1
372,527 + +0.3
372,528 - +0.3
372,532 + +1.1

Or see this region's nucleotide sequence