Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS16600 and ABZR86_RS16605 are separated by 36 nucleotides ABZR86_RS16605 and ABZR86_RS16610 are separated by 10 nucleotides ABZR86_RS16610 and ABZR86_RS16615 are separated by 153 nucleotides
ABZR86_RS16600: ABZR86_RS16600 - hypothetical protein, at 3,746,002 to 3,751,902
_RS16600
ABZR86_RS16605: ABZR86_RS16605 - RHS repeat-associated core domain-containing protein, at 3,751,939 to 3,752,868
_RS16605
ABZR86_RS16610: ABZR86_RS16610 - hypothetical protein, at 3,752,879 to 3,753,394
_RS16610
ABZR86_RS16615: ABZR86_RS16615 - ankyrin repeat domain-containing protein, at 3,753,548 to 3,754,192
_RS16615
Position (kb)
3751
3752
3753 Strain fitness (log2 ratio)
-1
0
1
2 at 3750.945 kb on + strand, within ABZR86_RS16600 at 3750.945 kb on + strand, within ABZR86_RS16600 at 3750.946 kb on - strand, within ABZR86_RS16600 at 3751.012 kb on + strand, within ABZR86_RS16600 at 3751.012 kb on + strand, within ABZR86_RS16600 at 3751.012 kb on + strand, within ABZR86_RS16600 at 3751.013 kb on - strand, within ABZR86_RS16600 at 3751.297 kb on + strand, within ABZR86_RS16600 at 3751.329 kb on + strand at 3751.412 kb on - strand at 3751.450 kb on + strand at 3751.553 kb on - strand at 3751.602 kb on - strand at 3751.634 kb on + strand at 3751.681 kb on + strand at 3751.721 kb on - strand at 3751.766 kb on - strand at 3751.971 kb on - strand at 3751.978 kb on - strand at 3751.978 kb on - strand at 3751.989 kb on - strand at 3751.989 kb on - strand at 3752.054 kb on + strand, within ABZR86_RS16605 at 3752.078 kb on - strand, within ABZR86_RS16605 at 3752.083 kb on + strand, within ABZR86_RS16605 at 3752.083 kb on + strand, within ABZR86_RS16605 at 3752.084 kb on - strand, within ABZR86_RS16605 at 3752.134 kb on - strand, within ABZR86_RS16605 at 3752.134 kb on - strand, within ABZR86_RS16605 at 3752.177 kb on + strand, within ABZR86_RS16605 at 3752.242 kb on + strand, within ABZR86_RS16605 at 3752.243 kb on - strand, within ABZR86_RS16605 at 3752.260 kb on + strand, within ABZR86_RS16605 at 3752.261 kb on - strand, within ABZR86_RS16605 at 3752.261 kb on - strand, within ABZR86_RS16605 at 3752.308 kb on - strand, within ABZR86_RS16605 at 3752.335 kb on - strand, within ABZR86_RS16605 at 3752.516 kb on + strand, within ABZR86_RS16605 at 3752.516 kb on + strand, within ABZR86_RS16605 at 3752.517 kb on - strand, within ABZR86_RS16605 at 3752.517 kb on - strand, within ABZR86_RS16605 at 3752.525 kb on - strand, within ABZR86_RS16605 at 3752.606 kb on + strand, within ABZR86_RS16605 at 3752.652 kb on + strand, within ABZR86_RS16605 at 3752.686 kb on - strand, within ABZR86_RS16605 at 3752.731 kb on - strand, within ABZR86_RS16605 at 3753.006 kb on + strand, within ABZR86_RS16610 at 3753.007 kb on - strand, within ABZR86_RS16610 at 3753.007 kb on - strand, within ABZR86_RS16610 at 3753.007 kb on - strand, within ABZR86_RS16610 at 3753.111 kb on - strand, within ABZR86_RS16610 at 3753.127 kb on + strand, within ABZR86_RS16610 at 3753.293 kb on - strand, within ABZR86_RS16610 at 3753.304 kb on - strand, within ABZR86_RS16610 at 3753.378 kb on + strand at 3753.378 kb on + strand at 3753.379 kb on - strand at 3753.427 kb on - strand at 3753.438 kb on - strand at 3753.530 kb on + strand at 3753.707 kb on + strand, within ABZR86_RS16615 at 3753.767 kb on + strand, within ABZR86_RS16615 at 3753.807 kb on + strand, within ABZR86_RS16615
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.2 mg/ml remove 3,750,945 + ABZR86_RS16600 0.84 +0.4 3,750,945 + ABZR86_RS16600 0.84 +0.4 3,750,946 - ABZR86_RS16600 0.84 -0.6 3,751,012 + ABZR86_RS16600 0.85 -0.1 3,751,012 + ABZR86_RS16600 0.85 +0.3 3,751,012 + ABZR86_RS16600 0.85 -1.0 3,751,013 - ABZR86_RS16600 0.85 +0.6 3,751,297 + ABZR86_RS16600 0.90 -0.2 3,751,329 + -1.3 3,751,412 - -0.2 3,751,450 + -0.2 3,751,553 - -0.5 3,751,602 - -0.3 3,751,634 + -0.2 3,751,681 + -0.5 3,751,721 - -0.2 3,751,766 - -0.3 3,751,971 - +0.9 3,751,978 - -0.8 3,751,978 - -1.7 3,751,989 - +0.0 3,751,989 - +0.1 3,752,054 + ABZR86_RS16605 0.12 +0.2 3,752,078 - ABZR86_RS16605 0.15 -0.4 3,752,083 + ABZR86_RS16605 0.15 +0.6 3,752,083 + ABZR86_RS16605 0.15 +0.9 3,752,084 - ABZR86_RS16605 0.16 -0.2 3,752,134 - ABZR86_RS16605 0.21 +0.0 3,752,134 - ABZR86_RS16605 0.21 -0.4 3,752,177 + ABZR86_RS16605 0.26 +1.2 3,752,242 + ABZR86_RS16605 0.33 -0.3 3,752,243 - ABZR86_RS16605 0.33 -0.4 3,752,260 + ABZR86_RS16605 0.35 +0.0 3,752,261 - ABZR86_RS16605 0.35 -0.0 3,752,261 - ABZR86_RS16605 0.35 +0.6 3,752,308 - ABZR86_RS16605 0.40 -0.7 3,752,335 - ABZR86_RS16605 0.43 -0.0 3,752,516 + ABZR86_RS16605 0.62 -0.5 3,752,516 + ABZR86_RS16605 0.62 -0.4 3,752,517 - ABZR86_RS16605 0.62 +0.5 3,752,517 - ABZR86_RS16605 0.62 +0.5 3,752,525 - ABZR86_RS16605 0.63 -0.8 3,752,606 + ABZR86_RS16605 0.72 -0.8 3,752,652 + ABZR86_RS16605 0.77 +0.2 3,752,686 - ABZR86_RS16605 0.80 -0.2 3,752,731 - ABZR86_RS16605 0.85 -0.6 3,753,006 + ABZR86_RS16610 0.25 +1.1 3,753,007 - ABZR86_RS16610 0.25 +0.4 3,753,007 - ABZR86_RS16610 0.25 +0.6 3,753,007 - ABZR86_RS16610 0.25 +1.1 3,753,111 - ABZR86_RS16610 0.45 +0.7 3,753,127 + ABZR86_RS16610 0.48 +1.1 3,753,293 - ABZR86_RS16610 0.80 -0.2 3,753,304 - ABZR86_RS16610 0.82 +1.2 3,753,378 + +0.5 3,753,378 + +0.4 3,753,379 - +0.3 3,753,427 - +1.2 3,753,438 - +1.8 3,753,530 + -0.4 3,753,707 + ABZR86_RS16615 0.25 -0.3 3,753,767 + ABZR86_RS16615 0.34 +1.8 3,753,807 + ABZR86_RS16615 0.40 -0.2
Or see this region's nucleotide sequence