Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS09355 and ABZR86_RS09360 overlap by 4 nucleotides ABZR86_RS09360 and ABZR86_RS09365 are separated by 4 nucleotides ABZR86_RS09365 and ABZR86_RS09370 are separated by 35 nucleotides
ABZR86_RS09355: ABZR86_RS09355 - sulfite reductase flavoprotein subunit alpha, at 2,083,758 to 2,085,362
_RS09355
ABZR86_RS09360: ABZR86_RS09360 - FAD:protein FMN transferase, at 2,085,359 to 2,086,315
_RS09360
ABZR86_RS09365: ABZR86_RS09365 - DUF4198 domain-containing protein, at 2,086,320 to 2,087,132
_RS09365
ABZR86_RS09370: ABZR86_RS09370 - DUF2271 domain-containing protein, at 2,087,168 to 2,087,683
_RS09370
Position (kb)
2085
2086
2087 Strain fitness (log2 ratio)
-1
0
1
2 at 2084.873 kb on - strand, within ABZR86_RS09355 at 2085.109 kb on + strand, within ABZR86_RS09355 at 2085.110 kb on - strand, within ABZR86_RS09355 at 2085.110 kb on - strand, within ABZR86_RS09355 at 2085.110 kb on - strand, within ABZR86_RS09355 at 2085.543 kb on - strand, within ABZR86_RS09360 at 2085.684 kb on + strand, within ABZR86_RS09360 at 2085.685 kb on - strand, within ABZR86_RS09360 at 2085.862 kb on + strand, within ABZR86_RS09360 at 2085.863 kb on - strand, within ABZR86_RS09360 at 2085.863 kb on - strand, within ABZR86_RS09360 at 2085.864 kb on + strand, within ABZR86_RS09360 at 2085.864 kb on + strand, within ABZR86_RS09360 at 2085.864 kb on + strand, within ABZR86_RS09360 at 2085.865 kb on - strand, within ABZR86_RS09360 at 2085.865 kb on - strand, within ABZR86_RS09360 at 2086.032 kb on + strand, within ABZR86_RS09360 at 2086.158 kb on + strand, within ABZR86_RS09360 at 2086.159 kb on - strand, within ABZR86_RS09360 at 2086.159 kb on - strand, within ABZR86_RS09360 at 2086.420 kb on + strand, within ABZR86_RS09365 at 2086.421 kb on - strand, within ABZR86_RS09365 at 2086.421 kb on - strand, within ABZR86_RS09365 at 2086.798 kb on + strand, within ABZR86_RS09365 at 2086.798 kb on + strand, within ABZR86_RS09365 at 2086.799 kb on - strand, within ABZR86_RS09365 at 2086.837 kb on + strand, within ABZR86_RS09365 at 2086.838 kb on - strand, within ABZR86_RS09365 at 2086.838 kb on - strand, within ABZR86_RS09365 at 2086.879 kb on + strand, within ABZR86_RS09365 at 2086.879 kb on + strand, within ABZR86_RS09365 at 2086.880 kb on - strand, within ABZR86_RS09365 at 2086.880 kb on - strand, within ABZR86_RS09365 at 2086.880 kb on - strand, within ABZR86_RS09365 at 2087.313 kb on + strand, within ABZR86_RS09370 at 2087.313 kb on + strand, within ABZR86_RS09370 at 2087.313 kb on + strand, within ABZR86_RS09370 at 2087.314 kb on - strand, within ABZR86_RS09370
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.2 mg/ml remove 2,084,873 - ABZR86_RS09355 0.69 +0.5 2,085,109 + ABZR86_RS09355 0.84 +0.8 2,085,110 - ABZR86_RS09355 0.84 +0.2 2,085,110 - ABZR86_RS09355 0.84 -0.1 2,085,110 - ABZR86_RS09355 0.84 +0.5 2,085,543 - ABZR86_RS09360 0.19 +1.1 2,085,684 + ABZR86_RS09360 0.34 -0.1 2,085,685 - ABZR86_RS09360 0.34 +0.0 2,085,862 + ABZR86_RS09360 0.53 -0.3 2,085,863 - ABZR86_RS09360 0.53 +0.1 2,085,863 - ABZR86_RS09360 0.53 +1.9 2,085,864 + ABZR86_RS09360 0.53 +0.8 2,085,864 + ABZR86_RS09360 0.53 -1.0 2,085,864 + ABZR86_RS09360 0.53 -0.4 2,085,865 - ABZR86_RS09360 0.53 +0.3 2,085,865 - ABZR86_RS09360 0.53 -0.1 2,086,032 + ABZR86_RS09360 0.70 +0.1 2,086,158 + ABZR86_RS09360 0.83 +0.1 2,086,159 - ABZR86_RS09360 0.84 +0.5 2,086,159 - ABZR86_RS09360 0.84 +0.9 2,086,420 + ABZR86_RS09365 0.12 +1.4 2,086,421 - ABZR86_RS09365 0.12 +0.3 2,086,421 - ABZR86_RS09365 0.12 -0.4 2,086,798 + ABZR86_RS09365 0.59 +0.1 2,086,798 + ABZR86_RS09365 0.59 +0.0 2,086,799 - ABZR86_RS09365 0.59 +0.2 2,086,837 + ABZR86_RS09365 0.64 -0.5 2,086,838 - ABZR86_RS09365 0.64 +0.1 2,086,838 - ABZR86_RS09365 0.64 -0.3 2,086,879 + ABZR86_RS09365 0.69 +0.1 2,086,879 + ABZR86_RS09365 0.69 -0.1 2,086,880 - ABZR86_RS09365 0.69 +0.8 2,086,880 - ABZR86_RS09365 0.69 +0.4 2,086,880 - ABZR86_RS09365 0.69 +0.5 2,087,313 + ABZR86_RS09370 0.28 -0.5 2,087,313 + ABZR86_RS09370 0.28 -0.4 2,087,313 + ABZR86_RS09370 0.28 +0.2 2,087,314 - ABZR86_RS09370 0.28 +0.9
Or see this region's nucleotide sequence