Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS04710 and ABZR86_RS04715 are separated by 40 nucleotides ABZR86_RS04715 and ABZR86_RS04720 are separated by 570 nucleotides
ABZR86_RS04710: ABZR86_RS04710 - amidohydrolase family protein, at 1,055,954 to 1,057,111
_RS04710
ABZR86_RS04715: ABZR86_RS04715 - class I SAM-dependent methyltransferase, at 1,057,152 to 1,058,012
_RS04715
ABZR86_RS04720: ABZR86_RS04720 - Wzz/FepE/Etk N-terminal domain-containing protein, at 1,058,583 to 1,059,404
_RS04720
Position (kb)
1057
1058
1059 Strain fitness (log2 ratio)
-2
-1
0
1 at 1056.301 kb on - strand, within ABZR86_RS04710 at 1056.301 kb on - strand, within ABZR86_RS04710 at 1056.717 kb on + strand, within ABZR86_RS04710 at 1056.718 kb on - strand, within ABZR86_RS04710 at 1056.924 kb on + strand, within ABZR86_RS04710 at 1056.924 kb on + strand, within ABZR86_RS04710 at 1056.924 kb on + strand, within ABZR86_RS04710 at 1056.924 kb on + strand, within ABZR86_RS04710 at 1056.924 kb on + strand, within ABZR86_RS04710 at 1056.924 kb on + strand, within ABZR86_RS04710 at 1056.924 kb on + strand, within ABZR86_RS04710 at 1056.924 kb on + strand, within ABZR86_RS04710 at 1056.924 kb on + strand, within ABZR86_RS04710 at 1056.924 kb on + strand, within ABZR86_RS04710 at 1056.925 kb on - strand, within ABZR86_RS04710 at 1056.925 kb on - strand, within ABZR86_RS04710 at 1056.925 kb on - strand, within ABZR86_RS04710 at 1056.925 kb on - strand, within ABZR86_RS04710 at 1056.925 kb on - strand, within ABZR86_RS04710 at 1057.010 kb on + strand at 1057.010 kb on + strand at 1057.011 kb on - strand at 1057.282 kb on + strand, within ABZR86_RS04715 at 1057.283 kb on - strand, within ABZR86_RS04715 at 1057.352 kb on - strand, within ABZR86_RS04715 at 1057.370 kb on - strand, within ABZR86_RS04715 at 1057.370 kb on - strand, within ABZR86_RS04715 at 1057.372 kb on + strand, within ABZR86_RS04715 at 1057.372 kb on + strand, within ABZR86_RS04715 at 1057.372 kb on + strand, within ABZR86_RS04715 at 1057.373 kb on - strand, within ABZR86_RS04715 at 1057.386 kb on - strand, within ABZR86_RS04715 at 1057.465 kb on + strand, within ABZR86_RS04715 at 1057.600 kb on + strand, within ABZR86_RS04715 at 1057.600 kb on + strand, within ABZR86_RS04715 at 1057.600 kb on + strand, within ABZR86_RS04715 at 1057.601 kb on - strand, within ABZR86_RS04715 at 1057.601 kb on - strand, within ABZR86_RS04715 at 1057.601 kb on - strand, within ABZR86_RS04715 at 1057.601 kb on - strand, within ABZR86_RS04715 at 1057.601 kb on - strand, within ABZR86_RS04715 at 1057.601 kb on - strand, within ABZR86_RS04715 at 1057.674 kb on - strand, within ABZR86_RS04715 at 1057.674 kb on - strand, within ABZR86_RS04715 at 1057.921 kb on + strand, within ABZR86_RS04715 at 1057.921 kb on + strand, within ABZR86_RS04715 at 1057.922 kb on - strand, within ABZR86_RS04715 at 1058.361 kb on + strand at 1058.539 kb on + strand at 1058.539 kb on + strand at 1058.539 kb on + strand at 1058.568 kb on + strand at 1058.568 kb on + strand at 1058.573 kb on + strand at 1058.573 kb on + strand at 1058.573 kb on + strand at 1058.574 kb on - strand at 1058.574 kb on - strand at 1058.574 kb on - strand at 1058.720 kb on - strand, within ABZR86_RS04720 at 1058.753 kb on - strand, within ABZR86_RS04720 at 1058.753 kb on - strand, within ABZR86_RS04720 at 1058.753 kb on - strand, within ABZR86_RS04720
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.2 mg/ml remove 1,056,301 - ABZR86_RS04710 0.30 -0.5 1,056,301 - ABZR86_RS04710 0.30 +0.7 1,056,717 + ABZR86_RS04710 0.66 +0.2 1,056,718 - ABZR86_RS04710 0.66 -0.0 1,056,924 + ABZR86_RS04710 0.84 +0.4 1,056,924 + ABZR86_RS04710 0.84 -0.4 1,056,924 + ABZR86_RS04710 0.84 +0.4 1,056,924 + ABZR86_RS04710 0.84 -0.2 1,056,924 + ABZR86_RS04710 0.84 -0.3 1,056,924 + ABZR86_RS04710 0.84 -1.3 1,056,924 + ABZR86_RS04710 0.84 -0.4 1,056,924 + ABZR86_RS04710 0.84 +0.9 1,056,924 + ABZR86_RS04710 0.84 +0.0 1,056,924 + ABZR86_RS04710 0.84 -0.8 1,056,925 - ABZR86_RS04710 0.84 -0.3 1,056,925 - ABZR86_RS04710 0.84 +0.5 1,056,925 - ABZR86_RS04710 0.84 +0.7 1,056,925 - ABZR86_RS04710 0.84 +0.4 1,056,925 - ABZR86_RS04710 0.84 -0.1 1,057,010 + -0.1 1,057,010 + -0.6 1,057,011 - +0.7 1,057,282 + ABZR86_RS04715 0.15 +1.2 1,057,283 - ABZR86_RS04715 0.15 +0.4 1,057,352 - ABZR86_RS04715 0.23 -0.4 1,057,370 - ABZR86_RS04715 0.25 -0.7 1,057,370 - ABZR86_RS04715 0.25 +0.6 1,057,372 + ABZR86_RS04715 0.26 -0.3 1,057,372 + ABZR86_RS04715 0.26 +0.2 1,057,372 + ABZR86_RS04715 0.26 +0.0 1,057,373 - ABZR86_RS04715 0.26 -0.8 1,057,386 - ABZR86_RS04715 0.27 +0.2 1,057,465 + ABZR86_RS04715 0.36 -1.2 1,057,600 + ABZR86_RS04715 0.52 +1.2 1,057,600 + ABZR86_RS04715 0.52 -0.2 1,057,600 + ABZR86_RS04715 0.52 -1.2 1,057,601 - ABZR86_RS04715 0.52 +0.5 1,057,601 - ABZR86_RS04715 0.52 -0.4 1,057,601 - ABZR86_RS04715 0.52 +0.2 1,057,601 - ABZR86_RS04715 0.52 -0.3 1,057,601 - ABZR86_RS04715 0.52 +0.8 1,057,601 - ABZR86_RS04715 0.52 +0.6 1,057,674 - ABZR86_RS04715 0.61 -0.3 1,057,674 - ABZR86_RS04715 0.61 +0.7 1,057,921 + ABZR86_RS04715 0.89 -0.2 1,057,921 + ABZR86_RS04715 0.89 +1.4 1,057,922 - ABZR86_RS04715 0.89 +0.8 1,058,361 + +0.5 1,058,539 + -0.7 1,058,539 + +0.1 1,058,539 + -0.2 1,058,568 + +1.1 1,058,568 + -0.7 1,058,573 + +0.6 1,058,573 + -0.5 1,058,573 + +1.0 1,058,574 - -1.8 1,058,574 - +0.2 1,058,574 - +0.7 1,058,720 - ABZR86_RS04720 0.17 -0.3 1,058,753 - ABZR86_RS04720 0.21 -0.3 1,058,753 - ABZR86_RS04720 0.21 +1.3 1,058,753 - ABZR86_RS04720 0.21 -0.5
Or see this region's nucleotide sequence