Experiment: nitrate 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0364 and SMa0367 are separated by 45 nucleotides SMa0367 and SMa0369 are separated by 97 nucleotides
SMa0364: SMa0364 - hypothetical protein, at 195,082 to 196,866
SMa0364
SMa0367: SMa0367 - hypothetical protein, at 196,912 to 197,808
SMa0367
SMa0369: SMa0369 - hypothetical protein, at 197,906 to 198,172
SMa0369
Position (kb) 196
197
198 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 195.948 kb on + strand, within SMa0364 at 195.949 kb on - strand, within SMa0364 at 196.020 kb on + strand, within SMa0364 at 196.021 kb on - strand, within SMa0364 at 196.047 kb on + strand, within SMa0364 at 196.048 kb on - strand, within SMa0364 at 196.048 kb on - strand, within SMa0364 at 196.194 kb on + strand, within SMa0364 at 196.194 kb on + strand, within SMa0364 at 196.194 kb on + strand, within SMa0364 at 196.195 kb on - strand, within SMa0364 at 196.195 kb on - strand, within SMa0364 at 196.731 kb on + strand at 196.744 kb on - strand at 196.865 kb on - strand at 196.927 kb on + strand at 197.065 kb on - strand, within SMa0367 at 197.199 kb on + strand, within SMa0367 at 197.199 kb on + strand, within SMa0367 at 197.199 kb on + strand, within SMa0367 at 197.200 kb on - strand, within SMa0367 at 197.315 kb on + strand, within SMa0367 at 197.492 kb on + strand, within SMa0367 at 197.537 kb on + strand, within SMa0367 at 197.718 kb on - strand, within SMa0367 at 197.723 kb on - strand at 197.909 kb on + strand at 198.090 kb on + strand, within SMa0369 at 198.102 kb on + strand, within SMa0369 at 198.103 kb on - strand, within SMa0369 at 198.115 kb on + strand, within SMa0369 at 198.118 kb on - strand, within SMa0369 at 198.170 kb on + strand at 198.171 kb on - strand at 198.220 kb on + strand at 198.256 kb on - strand at 198.256 kb on - strand at 198.289 kb on + strand at 198.325 kb on + strand at 198.326 kb on - strand at 198.326 kb on - strand at 198.423 kb on + strand at 198.423 kb on + strand at 198.764 kb on + strand at 198.764 kb on + strand at 198.764 kb on + strand at 198.764 kb on + strand at 198.765 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate 40 mM remove 195,948 + SMa0364 0.49 -3.4 195,949 - SMa0364 0.49 -0.5 196,020 + SMa0364 0.53 +0.7 196,021 - SMa0364 0.53 -1.0 196,047 + SMa0364 0.54 -0.6 196,048 - SMa0364 0.54 +1.2 196,048 - SMa0364 0.54 +0.9 196,194 + SMa0364 0.62 -0.6 196,194 + SMa0364 0.62 -0.4 196,194 + SMa0364 0.62 -0.6 196,195 - SMa0364 0.62 +0.8 196,195 - SMa0364 0.62 +1.9 196,731 + -0.0 196,744 - +0.3 196,865 - +0.8 196,927 + -0.7 197,065 - SMa0367 0.17 +0.2 197,199 + SMa0367 0.32 -0.4 197,199 + SMa0367 0.32 -0.3 197,199 + SMa0367 0.32 -0.3 197,200 - SMa0367 0.32 -1.8 197,315 + SMa0367 0.45 -3.0 197,492 + SMa0367 0.65 -0.7 197,537 + SMa0367 0.70 -0.2 197,718 - SMa0367 0.90 +0.3 197,723 - -0.6 197,909 + -0.3 198,090 + SMa0369 0.69 -1.4 198,102 + SMa0369 0.73 -0.1 198,103 - SMa0369 0.74 +0.7 198,115 + SMa0369 0.78 +0.3 198,118 - SMa0369 0.79 -0.3 198,170 + -1.0 198,171 - -0.4 198,220 + -2.1 198,256 - +2.9 198,256 - +1.5 198,289 + +0.4 198,325 + +0.5 198,326 - -2.5 198,326 - +0.2 198,423 + +0.4 198,423 + -0.6 198,764 + -0.0 198,764 + +0.3 198,764 + -0.2 198,764 + -0.6 198,765 - -0.7
Or see this region's nucleotide sequence