Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS08275

Experiment: formate McAA thiamine dropout

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	formate McAA thiamine dropout
1,522,791	-		MMJJ_RS08270	0.24	-0.6
1,522,791	-		MMJJ_RS08270	0.24	+0.3
1,522,791	-		MMJJ_RS08270	0.24	+0.5
1,522,791	-		MMJJ_RS08270	0.24	+0.9
1,522,794	-		MMJJ_RS08270	0.24	+0.9
1,522,794	-		MMJJ_RS08270	0.24	+0.3
1,522,821	-		MMJJ_RS08270	0.27	-0.8
1,522,821	-		MMJJ_RS08270	0.27	-0.4
1,522,821	-		MMJJ_RS08270	0.27	+0.2
1,522,822	+		MMJJ_RS08270	0.27	+0.4
1,522,822	+		MMJJ_RS08270	0.27	-0.2
1,522,822	+		MMJJ_RS08270	0.27	-0.5
1,522,823	-		MMJJ_RS08270	0.27	-0.0
1,522,823	-		MMJJ_RS08270	0.27	-0.3
1,522,823	-		MMJJ_RS08270	0.27	-0.2
1,522,823	-		MMJJ_RS08270	0.27	+0.1
1,522,823	-		MMJJ_RS08270	0.27	+1.0
1,522,823	-		MMJJ_RS08270	0.27	+1.1
1,522,824	+		MMJJ_RS08270	0.27	-0.4
1,522,824	+		MMJJ_RS08270	0.27	+1.0
1,522,824	+		MMJJ_RS08270	0.27	+0.3
1,522,824	+		MMJJ_RS08270	0.27	-0.8
1,522,824	+		MMJJ_RS08270	0.27	-0.3
1,522,825	-		MMJJ_RS08270	0.27	-1.0
1,522,856	-		MMJJ_RS08270	0.30	+0.4
1,522,856	-		MMJJ_RS08270	0.30	+0.8
1,522,860	-		MMJJ_RS08270	0.30	+0.4
1,522,861	+		MMJJ_RS08270	0.30	+1.0
1,522,899	-		MMJJ_RS08270	0.34	-0.1
1,522,899	-		MMJJ_RS08270	0.34	-0.7
1,522,900	+		MMJJ_RS08270	0.34	-0.5
1,522,991	+		MMJJ_RS08270	0.42	-2.2
1,523,057	-		MMJJ_RS08270	0.48	-0.1
1,523,058	+		MMJJ_RS08270	0.48	+1.5
1,523,070	-		MMJJ_RS08270	0.49	-0.1
1,523,119	+		MMJJ_RS08270	0.53	+0.1
1,523,176	+		MMJJ_RS08270	0.58	-0.2
1,523,245	+		MMJJ_RS08270	0.64	-0.6
1,523,245	+		MMJJ_RS08270	0.64	-0.5
1,523,248	+		MMJJ_RS08270	0.65	+0.6
1,523,248	+		MMJJ_RS08270	0.65	+0.6
1,523,259	-		MMJJ_RS08270	0.66	+0.6
1,523,260	+		MMJJ_RS08270	0.66	-0.7
1,523,282	-		MMJJ_RS08270	0.68	+0.2
1,523,291	-		MMJJ_RS08270	0.69	+0.6
1,523,301	+		MMJJ_RS08270	0.69	+1.2
1,523,342	+		MMJJ_RS08270	0.73	+0.8
1,523,396	-		MMJJ_RS08270	0.78	-0.2
1,523,396	-		MMJJ_RS08270	0.78	+0.7
1,523,399	+		MMJJ_RS08270	0.78	-0.7
1,523,409	-		MMJJ_RS08270	0.79	+0.3
1,523,409	-		MMJJ_RS08270	0.79	+0.5
1,523,409	-		MMJJ_RS08270	0.79	+1.3
1,523,410	+		MMJJ_RS08270	0.79	-0.9
1,523,410	+		MMJJ_RS08270	0.79	+1.1
1,523,460	-		MMJJ_RS08270	0.84	+0.6
1,523,525	-		MMJJ_RS08270	0.89	-0.3
1,523,525	-		MMJJ_RS08270	0.89	-0.5
1,523,525	-		MMJJ_RS08270	0.89	+0.2
1,523,525	-		MMJJ_RS08270	0.89	+0.6
1,523,525	-		MMJJ_RS08270	0.89	+0.7
1,523,526	+		MMJJ_RS08270	0.89	-0.9
1,523,526	+		MMJJ_RS08270	0.89	-0.9
1,523,526	+		MMJJ_RS08270	0.89	-0.1
1,523,526	+		MMJJ_RS08270	0.89	-2.2
1,523,526	+		MMJJ_RS08270	0.89	+0.7
1,523,536	+				-0.1
1,523,547	+				-0.1
1,523,547	+				-1.3
1,523,576	-				-1.0
1,523,576	-				-0.7
1,523,577	+				+0.5
1,523,577	+				-0.0
1,523,618	-				+0.4
1,523,628	+				+0.3
1,523,628	+				+0.3
1,523,628	+				+0.1
1,523,628	+				+0.3
1,523,641	-				+0.1
1,523,642	+				-0.6
1,523,646	-				-0.1
1,523,646	-				-1.1
1,523,648	-				-0.2
1,523,649	+				-0.8
1,523,649	+				+0.0
1,523,691	+				+0.1
1,523,745	-				-0.5
1,523,761	-				+0.3
1,523,762	+				+0.5
1,523,762	+				+0.2
1,523,794	-				+0.2
1,523,795	+				-1.0
1,523,840	-				+0.3
1,523,841	+				+0.5
1,523,869	-				+1.4
1,523,869	-				-0.8
1,523,869	-				-2.2
1,523,870	+				+1.1
1,523,899	+		MMJJ_RS08275	0.10	+2.1
1,523,921	+		MMJJ_RS08275	0.12	+0.9
1,523,923	-		MMJJ_RS08275	0.12	+0.6
1,523,924	+		MMJJ_RS08275	0.12	+0.1
1,523,924	+		MMJJ_RS08275	0.12	-0.1
1,523,924	+		MMJJ_RS08275	0.12	-2.2
1,523,935	+				-0.5
1,523,935	+		MMJJ_RS08275	0.13	+0.1
1,523,935	+		MMJJ_RS08275	0.13	+1.1
1,523,935	+		MMJJ_RS08275	0.13	+1.1
1,523,936	-		MMJJ_RS08275	0.13	+0.5
1,523,936	-		MMJJ_RS08275	0.13	+1.1
1,523,936	-		MMJJ_RS08275	0.13	-0.3
1,523,936	-		MMJJ_RS08275	0.13	-1.4
1,523,936	-		MMJJ_RS08275	0.13	+0.4
1,523,937	+		MMJJ_RS08275	0.14	+0.2
1,523,937	+		MMJJ_RS08275	0.14	-0.1
1,523,937	+		MMJJ_RS08275	0.14	-0.9
1,523,937	+		MMJJ_RS08275	0.14	+0.6
1,523,937	+		MMJJ_RS08275	0.14	+0.9
1,523,937	+		MMJJ_RS08275	0.14	+0.9
1,523,937	+		MMJJ_RS08275	0.14	+1.8
1,523,937	+		MMJJ_RS08275	0.14	-0.4
1,523,937	+		MMJJ_RS08275	0.14	-0.6
1,523,940	+		MMJJ_RS08275	0.14	+0.2
1,523,940	+		MMJJ_RS08275	0.14	-0.9
1,523,944	+		MMJJ_RS08275	0.14	+1.2
1,523,944	+		MMJJ_RS08275	0.14	-1.1
1,523,953	-		MMJJ_RS08275	0.15	+0.5
1,523,963	-		MMJJ_RS08275	0.16	-0.5
1,523,975	-		MMJJ_RS08275	0.17	+1.1
1,523,975	-		MMJJ_RS08275	0.17	+1.4
1,523,975	-		MMJJ_RS08275	0.17	+0.1
1,523,976	+		MMJJ_RS08275	0.17	+0.8
1,523,976	+		MMJJ_RS08275	0.17	-0.4
1,523,985	+		MMJJ_RS08275	0.18	+0.2
1,523,988	-		MMJJ_RS08275	0.18	-0.2
1,523,988	-		MMJJ_RS08275	0.18	+0.8
1,523,988	-		MMJJ_RS08275	0.18	+0.2
1,523,989	+		MMJJ_RS08275	0.18	+0.7
1,523,989	+		MMJJ_RS08275	0.18	+0.5
1,523,989	+		MMJJ_RS08275	0.18	+0.2
1,523,989	+		MMJJ_RS08275	0.18	-0.1
1,523,989	+		MMJJ_RS08275	0.18	+0.1
1,523,989	+		MMJJ_RS08275	0.18	-0.8
1,523,990	-		MMJJ_RS08275	0.18	+0.6
1,523,990	-		MMJJ_RS08275	0.18	-0.0
1,523,990	-		MMJJ_RS08275	0.18	+1.2
1,523,990	-		MMJJ_RS08275	0.18	-0.3
1,523,990	-		MMJJ_RS08275	0.18	+1.7
1,523,991	+		MMJJ_RS08275	0.18	+1.4
1,523,991	+		MMJJ_RS08275	0.18	+1.1
1,523,991	+		MMJJ_RS08275	0.18	-0.8
1,523,991	+		MMJJ_RS08275	0.18	-0.2
1,523,991	+		MMJJ_RS08275	0.18	+0.9
1,523,991	+		MMJJ_RS08275	0.18	-0.5
1,523,992	-		MMJJ_RS08275	0.18	-0.2
1,523,992	-		MMJJ_RS08275	0.18	+1.3
1,523,992	-		MMJJ_RS08275	0.18	-0.0
1,523,992	-		MMJJ_RS08275	0.18	-0.8
1,523,992	-		MMJJ_RS08275	0.18	+0.7
1,523,992	-		MMJJ_RS08275	0.18	+0.1
1,523,993	+		MMJJ_RS08275	0.18	+1.1
1,523,993	+		MMJJ_RS08275	0.18	-0.4
1,523,993	+		MMJJ_RS08275	0.18	+0.3
1,523,993	+		MMJJ_RS08275	0.18	+0.4
1,523,995	-		MMJJ_RS08275	0.19	+0.8
1,523,996	+		MMJJ_RS08275	0.19	+0.7
1,523,996	+		MMJJ_RS08275	0.19	+0.3
1,523,999	-		MMJJ_RS08275	0.19	+0.2
1,523,999	-		MMJJ_RS08275	0.19	-0.6
1,523,999	-		MMJJ_RS08275	0.19	+0.4
1,523,999	-		MMJJ_RS08275	0.19	-0.1
1,524,035	-		MMJJ_RS08275	0.22	-1.0
1,524,035	-		MMJJ_RS08275	0.22	+0.1
1,524,038	-		MMJJ_RS08275	0.22	+0.2
1,524,039	+		MMJJ_RS08275	0.22	+0.9
1,524,067	-		MMJJ_RS08275	0.25	-0.5
1,524,078	-		MMJJ_RS08275	0.26	+0.5
1,524,078	-		MMJJ_RS08275	0.26	-0.4
1,524,078	-		MMJJ_RS08275	0.26	+0.8
1,524,079	+		MMJJ_RS08275	0.26	-0.1
1,524,079	+		MMJJ_RS08275	0.26	-1.1
1,524,079	+				+0.8
1,524,079	+		MMJJ_RS08275	0.26	+0.2
1,524,091	+		MMJJ_RS08275	0.27	+0.4
1,524,103	-		MMJJ_RS08275	0.28	+0.2
1,524,103	-		MMJJ_RS08275	0.28	+0.8
1,524,103	-		MMJJ_RS08275	0.28	+1.0
1,524,103	-		MMJJ_RS08275	0.28	+0.6
1,524,104	+		MMJJ_RS08275	0.28	+0.7
1,524,104	+		MMJJ_RS08275	0.28	+2.1
1,524,122	+		MMJJ_RS08275	0.30	+0.6
1,524,123	-		MMJJ_RS08275	0.30	-0.7
1,524,141	-		MMJJ_RS08275	0.31	+1.2
1,524,141	-		MMJJ_RS08275	0.31	-1.5
1,524,141	-		MMJJ_RS08275	0.31	-0.6
1,524,141	-		MMJJ_RS08275	0.31	-0.6
1,524,141	-		MMJJ_RS08275	0.31	+1.5
1,524,142	+		MMJJ_RS08275	0.31	+0.4
1,524,142	+		MMJJ_RS08275	0.31	+0.5
1,524,142	+		MMJJ_RS08275	0.31	+0.2
1,524,142	+		MMJJ_RS08275	0.31	+0.6
1,524,142	+		MMJJ_RS08275	0.31	-2.1
1,524,143	-		MMJJ_RS08275	0.32	-1.5
1,524,143	-		MMJJ_RS08275	0.32	+0.3
1,524,143	-		MMJJ_RS08275	0.32	+0.6
1,524,143	-		MMJJ_RS08275	0.32	-0.5
1,524,144	+		MMJJ_RS08275	0.32	+0.0
1,524,144	+		MMJJ_RS08275	0.32	+1.2
1,524,144	+		MMJJ_RS08275	0.32	-0.1
1,524,144	+		MMJJ_RS08275	0.32	+0.1
1,524,144	+		MMJJ_RS08275	0.32	-0.5
1,524,145	-		MMJJ_RS08275	0.32	+1.1
1,524,145	-		MMJJ_RS08275	0.32	-0.3
1,524,145	-		MMJJ_RS08275	0.32	-0.1
1,524,146	+		MMJJ_RS08275	0.32	-0.2
1,524,146	+		MMJJ_RS08275	0.32	-0.0
1,524,146	+		MMJJ_RS08275	0.32	-2.0
1,524,212	+		MMJJ_RS08275	0.38	-0.3
1,524,212	+		MMJJ_RS08275	0.38	-0.3
1,524,222	-		MMJJ_RS08275	0.38	-0.0
1,524,222	-		MMJJ_RS08275	0.38	-0.2
1,524,223	+		MMJJ_RS08275	0.39	+0.3
1,524,229	-		MMJJ_RS08275	0.39	-0.5
1,524,230	+		MMJJ_RS08275	0.39	-0.2
1,524,230	+		MMJJ_RS08275	0.39	+0.8
1,524,269	-		MMJJ_RS08275	0.43	+1.1
1,524,269	-		MMJJ_RS08275	0.43	-0.1
1,524,269	-		MMJJ_RS08275	0.43	+0.8
1,524,269	-		MMJJ_RS08275	0.43	+1.0
1,524,269	-		MMJJ_RS08275	0.43	+0.2
1,524,269	-		MMJJ_RS08275	0.43	+0.9
1,524,270	+		MMJJ_RS08275	0.43	-0.5
1,524,270	+		MMJJ_RS08275	0.43	+0.7
1,524,270	+		MMJJ_RS08275	0.43	+0.4
1,524,270	+		MMJJ_RS08275	0.43	+1.0
1,524,271	-		MMJJ_RS08275	0.43	-1.1
1,524,271	-		MMJJ_RS08275	0.43	+0.2
1,524,271	-		MMJJ_RS08275	0.43	+1.0
1,524,271	-		MMJJ_RS08275	0.43	+0.2
1,524,271	-		MMJJ_RS08275	0.43	+0.5
1,524,271	-		MMJJ_RS08275	0.43	-0.3
1,524,271	-		MMJJ_RS08275	0.43	-1.3
1,524,271	-		MMJJ_RS08275	0.43	+0.8
1,524,272	+		MMJJ_RS08275	0.43	-0.2
1,524,272	+		MMJJ_RS08275	0.43	-0.4
1,524,272	+		MMJJ_RS08275	0.43	-0.7
1,524,272	+		MMJJ_RS08275	0.43	+1.7
1,524,272	+		MMJJ_RS08275	0.43	+1.6
1,524,272	+		MMJJ_RS08275	0.43	+1.4
1,524,272	+		MMJJ_RS08275	0.43	+1.0
1,524,272	+		MMJJ_RS08275	0.43	-0.5
1,524,310	+		MMJJ_RS08275	0.46	+0.5
1,524,318	-		MMJJ_RS08275	0.47	+0.0
1,524,319	+		MMJJ_RS08275	0.47	+1.7
1,524,350	+		MMJJ_RS08275	0.50	+0.7
1,524,373	+		MMJJ_RS08275	0.52	-0.2
1,524,391	-		MMJJ_RS08275	0.53	-0.8
1,524,391	-		MMJJ_RS08275	0.53	+0.7
1,524,391	-		MMJJ_RS08275	0.53	+0.6
1,524,392	+				-0.9
1,524,396	-		MMJJ_RS08275	0.54	-0.9
1,524,443	-		MMJJ_RS08275	0.58	-0.9
1,524,444	+		MMJJ_RS08275	0.58	-1.0
1,524,484	+		MMJJ_RS08275	0.61	+0.6
1,524,521	+		MMJJ_RS08275	0.65	+1.3
1,524,544	-		MMJJ_RS08275	0.67	-0.1
1,524,547	+		MMJJ_RS08275	0.67	+0.4
1,524,559	-		MMJJ_RS08275	0.68	-0.3
1,524,559	-		MMJJ_RS08275	0.68	+0.2
1,524,580	+		MMJJ_RS08275	0.70	+1.4
1,524,588	-		MMJJ_RS08275	0.71	+0.5
1,524,588	-		MMJJ_RS08275	0.71	+1.1
1,524,588	-		MMJJ_RS08275	0.71	+0.1
1,524,588	-		MMJJ_RS08275	0.71	-1.8
1,524,592	-		MMJJ_RS08275	0.71	+1.1
1,524,592	-		MMJJ_RS08275	0.71	+0.2
1,524,593	+		MMJJ_RS08275	0.71	+1.1
1,524,626	-		MMJJ_RS08275	0.74	+1.0
1,524,627	+		MMJJ_RS08275	0.74	+1.7
1,524,644	-		MMJJ_RS08275	0.75	+0.2
1,524,663	-		MMJJ_RS08275	0.77	-0.2
1,524,698	+		MMJJ_RS08275	0.80	+0.9
1,524,702	-		MMJJ_RS08275	0.80	+1.4
1,524,702	-		MMJJ_RS08275	0.80	+0.1
1,524,703	+		MMJJ_RS08275	0.81	-1.2
1,524,703	+		MMJJ_RS08275	0.81	-3.3
1,524,703	+		MMJJ_RS08275	0.81	+1.4
1,524,703	+		MMJJ_RS08275	0.81	+0.1
1,524,719	-		MMJJ_RS08275	0.82	-0.3
1,524,719	-		MMJJ_RS08275	0.82	+1.5
1,524,719	-		MMJJ_RS08275	0.82	+0.6
1,524,719	-		MMJJ_RS08275	0.82	+0.2
1,524,720	+		MMJJ_RS08275	0.82	+1.1
1,524,733	-		MMJJ_RS08275	0.83	-1.7
1,524,733	-		MMJJ_RS08275	0.83	-1.0
1,524,824	+				+2.3
1,524,937	+				+0.3
1,524,940	-				+1.7
1,524,968	-				-0.8
1,524,968	-				+0.8
1,524,982	-				+0.0
1,524,982	-				+0.4
1,524,982	-				+0.6
1,524,983	+				+0.7
1,524,983	+				-0.9
1,525,000	+				+0.4
1,525,065	-				+1.6
1,525,065	-				-0.0
1,525,065	-				-0.2
1,525,066	+				-0.3
1,525,067	-				+1.0
1,525,068	+				+0.1
1,525,110	-				+1.1
1,525,111	+				+1.0
1,525,111	+				-1.0
1,525,111	+				-0.5
1,525,111	+				+0.1
1,525,111	+				+0.5
1,525,112	-				-0.3
1,525,113	+				-0.6
1,525,113	+				-0.4
1,525,113	+				-0.3
1,525,117	+				-2.1
1,525,120	-				+0.4
1,525,120	-				-0.6
1,525,121	+				-1.7
1,525,126	-				+0.3
1,525,130	-				-0.2
1,525,131	+				+1.3
1,525,197	-				-1.0
1,525,220	-				-0.8
1,525,234	+				-0.5
1,525,318	-		MMJJ_RS08280	0.12	+0.0
1,525,318	-		MMJJ_RS08280	0.12	-0.4
1,525,322	-		MMJJ_RS08280	0.12	+0.5
1,525,322	-		MMJJ_RS08280	0.12	-0.2
1,525,322	-		MMJJ_RS08280	0.12	-0.5
1,525,322	-		MMJJ_RS08280	0.12	+0.6
1,525,322	-		MMJJ_RS08280	0.12	-0.5
1,525,322	-		MMJJ_RS08280	0.12	-0.6
1,525,322	-		MMJJ_RS08280	0.12	-0.1
1,525,322	-		MMJJ_RS08280	0.12	-1.8
1,525,322	-		MMJJ_RS08280	0.12	+0.4
1,525,322	-		MMJJ_RS08280	0.12	+0.2
1,525,323	+		MMJJ_RS08280	0.12	+1.7
1,525,323	+		MMJJ_RS08280	0.12	-0.3
1,525,323	+		MMJJ_RS08280	0.12	+0.1
1,525,323	+		MMJJ_RS08280	0.12	-0.4
1,525,323	+		MMJJ_RS08280	0.12	-1.0
1,525,372	+		MMJJ_RS08280	0.15	-0.5
1,525,380	-				+0.1
1,525,414	-		MMJJ_RS08280	0.17	+0.8
1,525,414	-		MMJJ_RS08280	0.17	+1.0
1,525,415	+		MMJJ_RS08280	0.17	-0.5
1,525,438	-		MMJJ_RS08280	0.18	-1.8
1,525,438	-		MMJJ_RS08280	0.18	-0.3
1,525,443	+		MMJJ_RS08280	0.19	+0.1
1,525,457	-		MMJJ_RS08280	0.19	+1.2
1,525,458	+		MMJJ_RS08280	0.20	+0.7
1,525,459	-		MMJJ_RS08280	0.20	+0.4
1,525,459	-		MMJJ_RS08280	0.20	+0.9
1,525,460	+		MMJJ_RS08280	0.20	+0.2
1,525,460	+		MMJJ_RS08280	0.20	+0.7
1,525,460	+		MMJJ_RS08280	0.20	+1.1
1,525,462	-		MMJJ_RS08280	0.20	-1.9
1,525,463	+		MMJJ_RS08280	0.20	+0.5
1,525,475	+		MMJJ_RS08280	0.20	+0.1
1,525,524	+		MMJJ_RS08280	0.23	+1.4
1,525,582	+		MMJJ_RS08280	0.27	-1.0
1,525,591	-		MMJJ_RS08280	0.27	+0.9
1,525,596	-		MMJJ_RS08280	0.27	+1.1
1,525,597	+		MMJJ_RS08280	0.27	+0.3
1,525,621	-		MMJJ_RS08280	0.29	+0.7
1,525,622	+		MMJJ_RS08280	0.29	+0.4
1,525,625	-		MMJJ_RS08280	0.29	+0.3
1,525,630	-		MMJJ_RS08280	0.29	+0.5
1,525,748	-		MMJJ_RS08280	0.36	-0.4
1,525,748	-		MMJJ_RS08280	0.36	+1.5
1,525,777	-		MMJJ_RS08280	0.38	+0.5
1,525,789	-		MMJJ_RS08280	0.38	-0.5
1,525,790	+		MMJJ_RS08280	0.38	+0.7