Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS22095 and ABZR86_RS22100 are separated by 116 nucleotides ABZR86_RS22100 and ABZR86_RS22105 are separated by 140 nucleotides ABZR86_RS22105 and ABZR86_RS22110 are separated by 640 nucleotides
ABZR86_RS22095: ABZR86_RS22095 - acyl-CoA dehydrogenase family protein, at 381,192 to 382,832
_RS22095
ABZR86_RS22100: ABZR86_RS22100 - asparaginase domain-containing protein, at 382,949 to 383,434
_RS22100
ABZR86_RS22105: ABZR86_RS22105 - protease pro-enzyme activation domain-containing protein, at 383,575 to 386,202
_RS22105
ABZR86_RS22110: ABZR86_RS22110 - putative Fe-S cluster assembly protein SufT, at 386,843 to 387,397
_RS22110
Position (kb) 383
384
385
386
387 Strain fitness (log2 ratio) -2
-1
0
1 at 382.830 kb on + strand at 382.830 kb on + strand at 382.831 kb on - strand at 382.913 kb on + strand at 382.913 kb on + strand at 382.913 kb on + strand at 382.913 kb on + strand at 382.913 kb on + strand at 382.913 kb on + strand at 382.914 kb on - strand at 382.918 kb on + strand at 382.918 kb on + strand at 382.918 kb on + strand at 382.918 kb on + strand at 382.918 kb on + strand at 382.919 kb on - strand at 382.919 kb on - strand at 382.919 kb on - strand at 382.919 kb on - strand at 382.919 kb on - strand at 382.919 kb on - strand at 382.997 kb on + strand at 382.997 kb on + strand at 382.998 kb on - strand, within ABZR86_RS22100 at 382.998 kb on - strand, within ABZR86_RS22100 at 382.998 kb on - strand, within ABZR86_RS22100 at 382.998 kb on - strand, within ABZR86_RS22100 at 383.018 kb on + strand, within ABZR86_RS22100 at 383.019 kb on - strand, within ABZR86_RS22100 at 383.019 kb on - strand, within ABZR86_RS22100 at 383.354 kb on + strand, within ABZR86_RS22100 at 383.354 kb on + strand, within ABZR86_RS22100 at 383.355 kb on - strand, within ABZR86_RS22100 at 383.355 kb on - strand, within ABZR86_RS22100 at 383.355 kb on - strand, within ABZR86_RS22100 at 383.432 kb on + strand at 383.432 kb on + strand at 383.433 kb on - strand at 383.444 kb on + strand at 383.445 kb on - strand at 383.445 kb on - strand at 383.445 kb on - strand at 383.445 kb on - strand at 383.527 kb on + strand at 383.527 kb on + strand at 383.527 kb on + strand at 383.528 kb on - strand at 383.671 kb on - strand at 383.672 kb on + strand at 383.672 kb on + strand at 383.672 kb on + strand at 383.672 kb on + strand at 383.672 kb on + strand at 383.673 kb on - strand at 383.673 kb on - strand at 383.673 kb on - strand at 383.673 kb on - strand at 383.673 kb on - strand at 383.729 kb on + strand at 383.730 kb on - strand at 383.834 kb on + strand at 383.835 kb on - strand at 383.912 kb on + strand, within ABZR86_RS22105 at 384.143 kb on + strand, within ABZR86_RS22105 at 384.143 kb on + strand, within ABZR86_RS22105 at 384.143 kb on + strand, within ABZR86_RS22105 at 384.144 kb on - strand, within ABZR86_RS22105 at 384.144 kb on - strand, within ABZR86_RS22105 at 384.144 kb on - strand, within ABZR86_RS22105 at 384.144 kb on - strand, within ABZR86_RS22105 at 384.161 kb on + strand, within ABZR86_RS22105 at 384.161 kb on + strand, within ABZR86_RS22105 at 384.161 kb on + strand, within ABZR86_RS22105 at 384.162 kb on - strand, within ABZR86_RS22105 at 384.395 kb on + strand, within ABZR86_RS22105 at 384.395 kb on + strand, within ABZR86_RS22105 at 384.395 kb on + strand, within ABZR86_RS22105 at 384.395 kb on + strand, within ABZR86_RS22105 at 384.396 kb on - strand, within ABZR86_RS22105 at 384.396 kb on - strand, within ABZR86_RS22105 at 384.396 kb on - strand, within ABZR86_RS22105 at 384.396 kb on - strand, within ABZR86_RS22105 at 384.396 kb on - strand, within ABZR86_RS22105 at 384.396 kb on - strand, within ABZR86_RS22105 at 384.419 kb on + strand, within ABZR86_RS22105 at 384.420 kb on - strand, within ABZR86_RS22105 at 384.434 kb on + strand, within ABZR86_RS22105 at 384.434 kb on + strand, within ABZR86_RS22105 at 384.434 kb on + strand, within ABZR86_RS22105 at 384.434 kb on + strand, within ABZR86_RS22105 at 384.434 kb on + strand, within ABZR86_RS22105 at 384.435 kb on - strand, within ABZR86_RS22105 at 384.435 kb on - strand, within ABZR86_RS22105 at 384.435 kb on - strand, within ABZR86_RS22105 at 384.599 kb on + strand, within ABZR86_RS22105 at 384.599 kb on + strand, within ABZR86_RS22105 at 384.600 kb on - strand, within ABZR86_RS22105 at 384.600 kb on - strand, within ABZR86_RS22105 at 384.600 kb on - strand, within ABZR86_RS22105 at 384.614 kb on + strand, within ABZR86_RS22105 at 384.614 kb on + strand, within ABZR86_RS22105 at 384.869 kb on + strand, within ABZR86_RS22105 at 384.869 kb on + strand, within ABZR86_RS22105 at 384.870 kb on - strand, within ABZR86_RS22105 at 384.899 kb on + strand, within ABZR86_RS22105 at 384.962 kb on + strand, within ABZR86_RS22105 at 384.962 kb on + strand, within ABZR86_RS22105 at 384.963 kb on - strand, within ABZR86_RS22105 at 384.963 kb on - strand, within ABZR86_RS22105 at 385.087 kb on + strand, within ABZR86_RS22105 at 385.088 kb on - strand, within ABZR86_RS22105 at 385.131 kb on - strand, within ABZR86_RS22105 at 385.190 kb on + strand, within ABZR86_RS22105 at 385.191 kb on - strand, within ABZR86_RS22105 at 385.436 kb on + strand, within ABZR86_RS22105 at 385.437 kb on - strand, within ABZR86_RS22105 at 385.437 kb on - strand, within ABZR86_RS22105 at 385.437 kb on - strand, within ABZR86_RS22105 at 385.437 kb on - strand, within ABZR86_RS22105 at 385.805 kb on + strand, within ABZR86_RS22105 at 385.835 kb on + strand, within ABZR86_RS22105 at 385.835 kb on + strand, within ABZR86_RS22105 at 385.835 kb on + strand, within ABZR86_RS22105 at 385.835 kb on + strand, within ABZR86_RS22105 at 385.836 kb on - strand, within ABZR86_RS22105 at 385.836 kb on - strand, within ABZR86_RS22105 at 385.844 kb on + strand, within ABZR86_RS22105 at 386.160 kb on - strand at 386.186 kb on + strand at 386.186 kb on + strand at 386.187 kb on - strand at 386.414 kb on - strand at 386.465 kb on - strand at 386.716 kb on - strand at 386.833 kb on + strand at 386.833 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 382,830 + -0.5 382,830 + +0.8 382,831 - +0.8 382,913 + +1.3 382,913 + -0.0 382,913 + -0.4 382,913 + +0.3 382,913 + +0.1 382,913 + +0.4 382,914 - -0.3 382,918 + +0.0 382,918 + -0.6 382,918 + -0.6 382,918 + +0.3 382,918 + -0.4 382,919 - -0.0 382,919 - +0.5 382,919 - +0.5 382,919 - -0.0 382,919 - -0.3 382,919 - +0.4 382,997 + +0.3 382,997 + -0.2 382,998 - ABZR86_RS22100 0.10 +0.6 382,998 - ABZR86_RS22100 0.10 +0.1 382,998 - ABZR86_RS22100 0.10 +0.2 382,998 - ABZR86_RS22100 0.10 +0.4 383,018 + ABZR86_RS22100 0.14 +1.0 383,019 - ABZR86_RS22100 0.14 -0.4 383,019 - ABZR86_RS22100 0.14 -0.3 383,354 + ABZR86_RS22100 0.83 -0.2 383,354 + ABZR86_RS22100 0.83 +0.2 383,355 - ABZR86_RS22100 0.84 -0.1 383,355 - ABZR86_RS22100 0.84 -0.5 383,355 - ABZR86_RS22100 0.84 -0.1 383,432 + -0.6 383,432 + +0.8 383,433 - +0.1 383,444 + +0.4 383,445 - +0.1 383,445 - -0.0 383,445 - +1.6 383,445 - -0.5 383,527 + -0.3 383,527 + +0.0 383,527 + -0.1 383,528 - +0.2 383,671 - +0.7 383,672 + +0.1 383,672 + +0.4 383,672 + -0.2 383,672 + -0.3 383,672 + -0.3 383,673 - -0.4 383,673 - -0.4 383,673 - +0.2 383,673 - +0.0 383,673 - -0.9 383,729 + -0.6 383,730 - -0.6 383,834 + +0.2 383,835 - -0.9 383,912 + ABZR86_RS22105 0.13 -0.6 384,143 + ABZR86_RS22105 0.22 -0.2 384,143 + ABZR86_RS22105 0.22 -0.3 384,143 + ABZR86_RS22105 0.22 +0.3 384,144 - ABZR86_RS22105 0.22 -0.2 384,144 - ABZR86_RS22105 0.22 -0.2 384,144 - ABZR86_RS22105 0.22 +0.1 384,144 - ABZR86_RS22105 0.22 -0.6 384,161 + ABZR86_RS22105 0.22 -0.3 384,161 + ABZR86_RS22105 0.22 +0.5 384,161 + ABZR86_RS22105 0.22 -0.1 384,162 - ABZR86_RS22105 0.22 +0.1 384,395 + ABZR86_RS22105 0.31 -0.2 384,395 + ABZR86_RS22105 0.31 +0.4 384,395 + ABZR86_RS22105 0.31 -0.5 384,395 + ABZR86_RS22105 0.31 -1.1 384,396 - ABZR86_RS22105 0.31 +0.0 384,396 - ABZR86_RS22105 0.31 +0.3 384,396 - ABZR86_RS22105 0.31 -0.1 384,396 - ABZR86_RS22105 0.31 +0.3 384,396 - ABZR86_RS22105 0.31 -0.2 384,396 - ABZR86_RS22105 0.31 +0.2 384,419 + ABZR86_RS22105 0.32 -0.6 384,420 - ABZR86_RS22105 0.32 -0.7 384,434 + ABZR86_RS22105 0.33 -0.1 384,434 + ABZR86_RS22105 0.33 -0.4 384,434 + ABZR86_RS22105 0.33 -1.0 384,434 + ABZR86_RS22105 0.33 -0.2 384,434 + ABZR86_RS22105 0.33 +0.2 384,435 - ABZR86_RS22105 0.33 +0.1 384,435 - ABZR86_RS22105 0.33 +0.5 384,435 - ABZR86_RS22105 0.33 -1.1 384,599 + ABZR86_RS22105 0.39 -0.5 384,599 + ABZR86_RS22105 0.39 -1.2 384,600 - ABZR86_RS22105 0.39 +0.2 384,600 - ABZR86_RS22105 0.39 -1.4 384,600 - ABZR86_RS22105 0.39 +0.2 384,614 + ABZR86_RS22105 0.40 +0.2 384,614 + ABZR86_RS22105 0.40 +0.6 384,869 + ABZR86_RS22105 0.49 +0.5 384,869 + ABZR86_RS22105 0.49 -1.2 384,870 - ABZR86_RS22105 0.49 +0.0 384,899 + ABZR86_RS22105 0.50 +0.1 384,962 + ABZR86_RS22105 0.53 -1.0 384,962 + ABZR86_RS22105 0.53 -0.4 384,963 - ABZR86_RS22105 0.53 -0.4 384,963 - ABZR86_RS22105 0.53 -0.3 385,087 + ABZR86_RS22105 0.58 -0.4 385,088 - ABZR86_RS22105 0.58 +0.4 385,131 - ABZR86_RS22105 0.59 -0.2 385,190 + ABZR86_RS22105 0.61 -0.9 385,191 - ABZR86_RS22105 0.61 +0.6 385,436 + ABZR86_RS22105 0.71 -0.0 385,437 - ABZR86_RS22105 0.71 -0.2 385,437 - ABZR86_RS22105 0.71 -0.2 385,437 - ABZR86_RS22105 0.71 +0.1 385,437 - ABZR86_RS22105 0.71 -1.6 385,805 + ABZR86_RS22105 0.85 -0.9 385,835 + ABZR86_RS22105 0.86 -0.0 385,835 + ABZR86_RS22105 0.86 +1.5 385,835 + ABZR86_RS22105 0.86 +0.3 385,835 + ABZR86_RS22105 0.86 -0.9 385,836 - ABZR86_RS22105 0.86 +0.2 385,836 - ABZR86_RS22105 0.86 +0.3 385,844 + ABZR86_RS22105 0.86 +0.7 386,160 - -0.3 386,186 + +0.8 386,186 + -0.4 386,187 - +0.5 386,414 - -0.0 386,465 - +0.1 386,716 - +0.3 386,833 + -2.0 386,833 + -0.0
Or see this region's nucleotide sequence