Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS19995 and ABZR86_RS20000 are separated by 153 nucleotides ABZR86_RS20000 and ABZR86_RS20005 are separated by 131 nucleotides ABZR86_RS20005 and ABZR86_RS20010 overlap by 4 nucleotides
ABZR86_RS19995: ABZR86_RS19995 - pantetheine-phosphate adenylyltransferase, at 492,195 to 492,698
_RS19995
ABZR86_RS20000: ABZR86_RS20000 - hypothetical protein, at 492,852 to 493,355
_RS20000
ABZR86_RS20005: ABZR86_RS20005 - YfhL family 4Fe-4S dicluster ferredoxin, at 493,487 to 493,744
_RS20005
ABZR86_RS20010: ABZR86_RS20010 - gamma-glutamyltransferase, at 493,741 to 495,477
_RS20010
Position (kb) 493
494 Strain fitness (log2 ratio) -1
0
1
2 at 492.707 kb on + strand at 492.707 kb on + strand at 492.707 kb on + strand at 492.707 kb on + strand at 492.707 kb on + strand at 492.707 kb on + strand at 492.707 kb on + strand at 492.708 kb on - strand at 492.708 kb on - strand at 492.729 kb on + strand at 492.729 kb on + strand at 492.729 kb on + strand at 492.729 kb on + strand at 492.729 kb on + strand at 492.730 kb on - strand at 492.730 kb on - strand at 492.855 kb on + strand at 492.855 kb on + strand at 492.855 kb on + strand at 492.855 kb on + strand at 492.855 kb on + strand at 492.855 kb on + strand at 492.855 kb on + strand at 492.855 kb on + strand at 492.855 kb on + strand at 492.855 kb on + strand at 492.856 kb on - strand at 492.856 kb on - strand at 492.856 kb on - strand at 492.856 kb on - strand at 492.856 kb on - strand at 492.856 kb on - strand at 492.856 kb on - strand at 492.856 kb on - strand at 492.861 kb on + strand at 492.861 kb on + strand at 492.861 kb on + strand at 492.861 kb on + strand at 492.861 kb on + strand at 492.861 kb on + strand at 492.862 kb on - strand at 492.862 kb on - strand at 492.862 kb on - strand at 492.862 kb on - strand at 492.862 kb on - strand at 492.862 kb on - strand at 492.862 kb on - strand at 492.862 kb on - strand at 492.862 kb on - strand at 492.862 kb on - strand at 492.862 kb on - strand at 492.862 kb on - strand at 493.008 kb on + strand, within ABZR86_RS20000 at 493.009 kb on - strand, within ABZR86_RS20000 at 493.009 kb on - strand, within ABZR86_RS20000 at 493.069 kb on - strand, within ABZR86_RS20000 at 493.069 kb on - strand, within ABZR86_RS20000 at 493.069 kb on - strand, within ABZR86_RS20000 at 493.353 kb on + strand at 493.353 kb on + strand at 493.354 kb on - strand at 493.354 kb on - strand at 493.354 kb on - strand at 493.414 kb on + strand at 493.476 kb on - strand at 493.476 kb on - strand at 493.712 kb on + strand, within ABZR86_RS20005 at 493.713 kb on - strand, within ABZR86_RS20005 at 493.713 kb on - strand, within ABZR86_RS20005 at 493.836 kb on + strand at 493.837 kb on - strand at 494.122 kb on + strand, within ABZR86_RS20010 at 494.122 kb on + strand, within ABZR86_RS20010 at 494.123 kb on - strand, within ABZR86_RS20010 at 494.123 kb on - strand, within ABZR86_RS20010 at 494.227 kb on + strand, within ABZR86_RS20010 at 494.470 kb on + strand, within ABZR86_RS20010 at 494.551 kb on + strand, within ABZR86_RS20010 at 494.551 kb on + strand, within ABZR86_RS20010 at 494.551 kb on + strand, within ABZR86_RS20010 at 494.551 kb on + strand, within ABZR86_RS20010 at 494.552 kb on - strand, within ABZR86_RS20010 at 494.552 kb on - strand, within ABZR86_RS20010 at 494.658 kb on + strand, within ABZR86_RS20010 at 494.658 kb on + strand, within ABZR86_RS20010
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 492,707 + -0.1 492,707 + +0.3 492,707 + +2.0 492,707 + +0.7 492,707 + +0.5 492,707 + +0.7 492,707 + -0.0 492,708 - +1.0 492,708 - +0.4 492,729 + +0.1 492,729 + +0.2 492,729 + +0.3 492,729 + -0.4 492,729 + -0.5 492,730 - -0.4 492,730 - -0.7 492,855 + +0.2 492,855 + +0.6 492,855 + -0.5 492,855 + -0.1 492,855 + -0.1 492,855 + +0.1 492,855 + +0.4 492,855 + +0.2 492,855 + +0.2 492,855 + -0.3 492,856 - -0.1 492,856 - -0.6 492,856 - +0.8 492,856 - +0.4 492,856 - +0.4 492,856 - +1.7 492,856 - +0.3 492,856 - -0.2 492,861 + +0.1 492,861 + +0.1 492,861 + -0.6 492,861 + -0.7 492,861 + +0.0 492,861 + +0.1 492,862 - +0.3 492,862 - +0.0 492,862 - +0.5 492,862 - +0.4 492,862 - +1.4 492,862 - -0.6 492,862 - -0.2 492,862 - +0.6 492,862 - -0.1 492,862 - +0.2 492,862 - -0.1 492,862 - -0.5 493,008 + ABZR86_RS20000 0.31 +0.2 493,009 - ABZR86_RS20000 0.31 +0.7 493,009 - ABZR86_RS20000 0.31 -0.2 493,069 - ABZR86_RS20000 0.43 +0.8 493,069 - ABZR86_RS20000 0.43 -0.6 493,069 - ABZR86_RS20000 0.43 +0.2 493,353 + -0.1 493,353 + -0.3 493,354 - -1.0 493,354 - +0.5 493,354 - -0.2 493,414 + -0.2 493,476 - -0.0 493,476 - -0.3 493,712 + ABZR86_RS20005 0.87 -1.2 493,713 - ABZR86_RS20005 0.88 -1.2 493,713 - ABZR86_RS20005 0.88 -1.6 493,836 + -0.9 493,837 - +0.1 494,122 + ABZR86_RS20010 0.22 +0.0 494,122 + ABZR86_RS20010 0.22 -0.2 494,123 - ABZR86_RS20010 0.22 -0.5 494,123 - ABZR86_RS20010 0.22 -0.5 494,227 + ABZR86_RS20010 0.28 -1.5 494,470 + ABZR86_RS20010 0.42 -0.3 494,551 + ABZR86_RS20010 0.47 +0.6 494,551 + ABZR86_RS20010 0.47 -0.9 494,551 + ABZR86_RS20010 0.47 -0.5 494,551 + ABZR86_RS20010 0.47 -0.5 494,552 - ABZR86_RS20010 0.47 -0.7 494,552 - ABZR86_RS20010 0.47 -0.7 494,658 + ABZR86_RS20010 0.53 +1.7 494,658 + ABZR86_RS20010 0.53 -0.3
Or see this region's nucleotide sequence