Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS13130

Experiment: Paraquat dichloride 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS13125 and ABZR86_RS13130 overlap by 4 nucleotidesABZR86_RS13130 and ABZR86_RS13135 are separated by 330 nucleotides ABZR86_RS13125: ABZR86_RS13125 - PPC domain-containing protein, at 2,946,901 to 2,948,874 _RS13125 ABZR86_RS13130: ABZR86_RS13130 - hypothetical protein, at 2,948,871 to 2,949,332 _RS13130 ABZR86_RS13135: ABZR86_RS13135 - S8 family serine peptidase, at 2,949,663 to 2,951,297 _RS13135 Position (kb) 2948 2949 2950Strain fitness (log2 ratio) -1 0 1at 2947.917 kb on + strand, within ABZR86_RS13125at 2948.013 kb on + strand, within ABZR86_RS13125at 2948.014 kb on - strand, within ABZR86_RS13125at 2948.016 kb on + strand, within ABZR86_RS13125at 2948.016 kb on + strand, within ABZR86_RS13125at 2948.017 kb on - strand, within ABZR86_RS13125at 2948.017 kb on - strand, within ABZR86_RS13125at 2948.017 kb on - strand, within ABZR86_RS13125at 2948.020 kb on + strand, within ABZR86_RS13125at 2948.020 kb on + strand, within ABZR86_RS13125at 2948.020 kb on + strand, within ABZR86_RS13125at 2948.027 kb on + strand, within ABZR86_RS13125at 2948.027 kb on + strand, within ABZR86_RS13125at 2948.027 kb on + strand, within ABZR86_RS13125at 2948.027 kb on + strand, within ABZR86_RS13125at 2948.027 kb on + strand, within ABZR86_RS13125at 2948.028 kb on - strand, within ABZR86_RS13125at 2948.028 kb on - strand, within ABZR86_RS13125at 2948.028 kb on - strand, within ABZR86_RS13125at 2948.028 kb on - strand, within ABZR86_RS13125at 2948.028 kb on - strand, within ABZR86_RS13125at 2948.031 kb on - strand, within ABZR86_RS13125at 2948.031 kb on - strand, within ABZR86_RS13125at 2948.036 kb on + strand, within ABZR86_RS13125at 2948.037 kb on - strand, within ABZR86_RS13125at 2948.069 kb on + strand, within ABZR86_RS13125at 2948.069 kb on + strand, within ABZR86_RS13125at 2948.069 kb on + strand, within ABZR86_RS13125at 2948.069 kb on + strand, within ABZR86_RS13125at 2948.069 kb on + strand, within ABZR86_RS13125at 2948.070 kb on - strand, within ABZR86_RS13125at 2948.070 kb on - strand, within ABZR86_RS13125at 2948.070 kb on - strand, within ABZR86_RS13125at 2948.070 kb on - strand, within ABZR86_RS13125at 2948.071 kb on + strand, within ABZR86_RS13125at 2948.071 kb on + strand, within ABZR86_RS13125at 2948.071 kb on + strand, within ABZR86_RS13125at 2948.071 kb on + strand, within ABZR86_RS13125at 2948.072 kb on - strand, within ABZR86_RS13125at 2948.072 kb on - strand, within ABZR86_RS13125at 2948.072 kb on - strand, within ABZR86_RS13125at 2948.072 kb on - strand, within ABZR86_RS13125at 2948.081 kb on + strand, within ABZR86_RS13125at 2948.082 kb on - strand, within ABZR86_RS13125at 2948.186 kb on + strand, within ABZR86_RS13125at 2948.186 kb on + strand, within ABZR86_RS13125at 2948.228 kb on + strand, within ABZR86_RS13125at 2948.228 kb on + strand, within ABZR86_RS13125at 2948.228 kb on + strand, within ABZR86_RS13125at 2948.228 kb on + strand, within ABZR86_RS13125at 2948.228 kb on + strand, within ABZR86_RS13125at 2948.229 kb on - strand, within ABZR86_RS13125at 2948.229 kb on - strand, within ABZR86_RS13125at 2948.229 kb on - strand, within ABZR86_RS13125at 2948.229 kb on - strand, within ABZR86_RS13125at 2948.229 kb on - strand, within ABZR86_RS13125at 2948.229 kb on - strand, within ABZR86_RS13125at 2948.229 kb on - strand, within ABZR86_RS13125at 2948.229 kb on - strand, within ABZR86_RS13125at 2948.229 kb on - strand, within ABZR86_RS13125at 2948.229 kb on - strand, within ABZR86_RS13125at 2948.266 kb on + strand, within ABZR86_RS13125at 2948.267 kb on - strand, within ABZR86_RS13125at 2948.267 kb on - strand, within ABZR86_RS13125at 2948.381 kb on + strand, within ABZR86_RS13125at 2948.382 kb on - strand, within ABZR86_RS13125at 2948.382 kb on - strand, within ABZR86_RS13125at 2948.382 kb on - strand, within ABZR86_RS13125at 2948.428 kb on - strand, within ABZR86_RS13125at 2948.440 kb on + strand, within ABZR86_RS13125at 2948.501 kb on + strand, within ABZR86_RS13125at 2948.502 kb on - strand, within ABZR86_RS13125at 2948.508 kb on + strand, within ABZR86_RS13125at 2948.508 kb on + strand, within ABZR86_RS13125at 2948.509 kb on - strand, within ABZR86_RS13125at 2948.511 kb on + strand, within ABZR86_RS13125at 2948.511 kb on + strand, within ABZR86_RS13125at 2948.511 kb on + strand, within ABZR86_RS13125at 2948.511 kb on + strand, within ABZR86_RS13125at 2948.511 kb on + strand, within ABZR86_RS13125at 2948.511 kb on + strand, within ABZR86_RS13125at 2948.511 kb on + strand, within ABZR86_RS13125at 2948.511 kb on + strand, within ABZR86_RS13125at 2948.512 kb on - strand, within ABZR86_RS13125at 2948.512 kb on - strand, within ABZR86_RS13125at 2948.512 kb on - strand, within ABZR86_RS13125at 2948.512 kb on - strand, within ABZR86_RS13125at 2948.512 kb on - strand, within ABZR86_RS13125at 2948.512 kb on - strand, within ABZR86_RS13125at 2948.512 kb on - strand, within ABZR86_RS13125at 2948.512 kb on - strand, within ABZR86_RS13125at 2948.549 kb on + strand, within ABZR86_RS13125at 2948.562 kb on + strand, within ABZR86_RS13125at 2948.563 kb on - strand, within ABZR86_RS13125at 2948.631 kb on + strand, within ABZR86_RS13125at 2948.632 kb on - strand, within ABZR86_RS13125at 2948.632 kb on - strand, within ABZR86_RS13125at 2949.108 kb on + strand, within ABZR86_RS13130at 2949.304 kb on + strandat 2949.304 kb on + strandat 2949.305 kb on - strandat 2949.530 kb on + strandat 2949.530 kb on + strandat 2949.531 kb on - strandat 2949.531 kb on - strandat 2949.545 kb on + strandat 2949.546 kb on - strandat 2949.697 kb on + strandat 2949.826 kb on + strandat 2949.827 kb on - strand, within ABZR86_RS13135at 2949.895 kb on + strand, within ABZR86_RS13135at 2949.895 kb on + strand, within ABZR86_RS13135at 2949.896 kb on - strand, within ABZR86_RS13135at 2949.988 kb on + strand, within ABZR86_RS13135at 2949.988 kb on + strand, within ABZR86_RS13135at 2950.030 kb on + strand, within ABZR86_RS13135at 2950.030 kb on + strand, within ABZR86_RS13135at 2950.030 kb on + strand, within ABZR86_RS13135at 2950.031 kb on - strand, within ABZR86_RS13135at 2950.039 kb on + strand, within ABZR86_RS13135at 2950.039 kb on + strand, within ABZR86_RS13135at 2950.040 kb on - strand, within ABZR86_RS13135at 2950.042 kb on + strand, within ABZR86_RS13135at 2950.042 kb on + strand, within ABZR86_RS13135at 2950.042 kb on + strand, within ABZR86_RS13135at 2950.215 kb on - strand, within ABZR86_RS13135at 2950.328 kb on - strand, within ABZR86_RS13135

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Per-strain Table

Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml
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2,947,917 + ABZR86_RS13125 0.51 +0.2
2,948,013 + ABZR86_RS13125 0.56 -0.1
2,948,014 - ABZR86_RS13125 0.56 +0.3
2,948,016 + ABZR86_RS13125 0.56 -0.0
2,948,016 + ABZR86_RS13125 0.56 -0.1
2,948,017 - ABZR86_RS13125 0.57 +0.2
2,948,017 - ABZR86_RS13125 0.57 +0.8
2,948,017 - ABZR86_RS13125 0.57 -0.3
2,948,020 + ABZR86_RS13125 0.57 -0.2
2,948,020 + ABZR86_RS13125 0.57 -0.5
2,948,020 + ABZR86_RS13125 0.57 -0.4
2,948,027 + ABZR86_RS13125 0.57 +0.2
2,948,027 + ABZR86_RS13125 0.57 +0.4
2,948,027 + ABZR86_RS13125 0.57 -0.5
2,948,027 + ABZR86_RS13125 0.57 +0.1
2,948,027 + ABZR86_RS13125 0.57 +0.5
2,948,028 - ABZR86_RS13125 0.57 -0.3
2,948,028 - ABZR86_RS13125 0.57 +0.4
2,948,028 - ABZR86_RS13125 0.57 +0.0
2,948,028 - ABZR86_RS13125 0.57 +0.5
2,948,028 - ABZR86_RS13125 0.57 +0.2
2,948,031 - ABZR86_RS13125 0.57 -0.2
2,948,031 - ABZR86_RS13125 0.57 +0.9
2,948,036 + ABZR86_RS13125 0.57 -0.2
2,948,037 - ABZR86_RS13125 0.58 +0.1
2,948,069 + ABZR86_RS13125 0.59 -0.1
2,948,069 + ABZR86_RS13125 0.59 -0.7
2,948,069 + ABZR86_RS13125 0.59 +0.2
2,948,069 + ABZR86_RS13125 0.59 -0.2
2,948,069 + ABZR86_RS13125 0.59 -0.3
2,948,070 - ABZR86_RS13125 0.59 +0.1
2,948,070 - ABZR86_RS13125 0.59 +1.1
2,948,070 - ABZR86_RS13125 0.59 +0.4
2,948,070 - ABZR86_RS13125 0.59 -0.0
2,948,071 + ABZR86_RS13125 0.59 +0.5
2,948,071 + ABZR86_RS13125 0.59 +1.0
2,948,071 + ABZR86_RS13125 0.59 +0.7
2,948,071 + ABZR86_RS13125 0.59 +0.5
2,948,072 - ABZR86_RS13125 0.59 -0.0
2,948,072 - ABZR86_RS13125 0.59 -0.5
2,948,072 - ABZR86_RS13125 0.59 +0.8
2,948,072 - ABZR86_RS13125 0.59 +0.5
2,948,081 + ABZR86_RS13125 0.60 -0.2
2,948,082 - ABZR86_RS13125 0.60 -0.4
2,948,186 + ABZR86_RS13125 0.65 +0.7
2,948,186 + ABZR86_RS13125 0.65 +0.4
2,948,228 + ABZR86_RS13125 0.67 -0.4
2,948,228 + ABZR86_RS13125 0.67 -0.2
2,948,228 + ABZR86_RS13125 0.67 +1.6
2,948,228 + ABZR86_RS13125 0.67 +0.1
2,948,228 + ABZR86_RS13125 0.67 +0.0
2,948,229 - ABZR86_RS13125 0.67 +0.6
2,948,229 - ABZR86_RS13125 0.67 -0.2
2,948,229 - ABZR86_RS13125 0.67 +0.5
2,948,229 - ABZR86_RS13125 0.67 +0.4
2,948,229 - ABZR86_RS13125 0.67 +0.4
2,948,229 - ABZR86_RS13125 0.67 +0.4
2,948,229 - ABZR86_RS13125 0.67 +0.3
2,948,229 - ABZR86_RS13125 0.67 -0.0
2,948,229 - ABZR86_RS13125 0.67 -0.2
2,948,229 - ABZR86_RS13125 0.67 +0.6
2,948,266 + ABZR86_RS13125 0.69 -1.2
2,948,267 - ABZR86_RS13125 0.69 -0.4
2,948,267 - ABZR86_RS13125 0.69 -0.1
2,948,381 + ABZR86_RS13125 0.75 -0.1
2,948,382 - ABZR86_RS13125 0.75 +0.1
2,948,382 - ABZR86_RS13125 0.75 -0.0
2,948,382 - ABZR86_RS13125 0.75 -0.4
2,948,428 - ABZR86_RS13125 0.77 +0.8
2,948,440 + ABZR86_RS13125 0.78 -0.3
2,948,501 + ABZR86_RS13125 0.81 -0.5
2,948,502 - ABZR86_RS13125 0.81 +0.2
2,948,508 + ABZR86_RS13125 0.81 -0.6
2,948,508 + ABZR86_RS13125 0.81 -0.2
2,948,509 - ABZR86_RS13125 0.81 +0.4
2,948,511 + ABZR86_RS13125 0.82 -0.0
2,948,511 + ABZR86_RS13125 0.82 +0.1
2,948,511 + ABZR86_RS13125 0.82 -0.4
2,948,511 + ABZR86_RS13125 0.82 +0.5
2,948,511 + ABZR86_RS13125 0.82 -0.4
2,948,511 + ABZR86_RS13125 0.82 -1.2
2,948,511 + ABZR86_RS13125 0.82 -0.1
2,948,511 + ABZR86_RS13125 0.82 +0.2
2,948,512 - ABZR86_RS13125 0.82 +1.1
2,948,512 - ABZR86_RS13125 0.82 +0.2
2,948,512 - ABZR86_RS13125 0.82 -0.7
2,948,512 - ABZR86_RS13125 0.82 +0.2
2,948,512 - ABZR86_RS13125 0.82 -0.0
2,948,512 - ABZR86_RS13125 0.82 +0.4
2,948,512 - ABZR86_RS13125 0.82 +0.6
2,948,512 - ABZR86_RS13125 0.82 +1.5
2,948,549 + ABZR86_RS13125 0.83 -0.1
2,948,562 + ABZR86_RS13125 0.84 +0.4
2,948,563 - ABZR86_RS13125 0.84 -0.0
2,948,631 + ABZR86_RS13125 0.88 -0.3
2,948,632 - ABZR86_RS13125 0.88 +0.4
2,948,632 - ABZR86_RS13125 0.88 -0.8
2,949,108 + ABZR86_RS13130 0.51 -0.7
2,949,304 + -0.2
2,949,304 + -0.3
2,949,305 - +0.1
2,949,530 + +0.1
2,949,530 + +0.2
2,949,531 - -0.3
2,949,531 - +0.1
2,949,545 + +0.6
2,949,546 - -1.0
2,949,697 + -0.4
2,949,826 + +0.4
2,949,827 - ABZR86_RS13135 0.10 -1.0
2,949,895 + ABZR86_RS13135 0.14 +0.2
2,949,895 + ABZR86_RS13135 0.14 +0.2
2,949,896 - ABZR86_RS13135 0.14 -0.6
2,949,988 + ABZR86_RS13135 0.20 +0.1
2,949,988 + ABZR86_RS13135 0.20 -0.5
2,950,030 + ABZR86_RS13135 0.22 -0.2
2,950,030 + ABZR86_RS13135 0.22 -0.5
2,950,030 + ABZR86_RS13135 0.22 -0.5
2,950,031 - ABZR86_RS13135 0.23 +0.0
2,950,039 + ABZR86_RS13135 0.23 +0.2
2,950,039 + ABZR86_RS13135 0.23 -0.1
2,950,040 - ABZR86_RS13135 0.23 +0.5
2,950,042 + ABZR86_RS13135 0.23 +0.3
2,950,042 + ABZR86_RS13135 0.23 +0.2
2,950,042 + ABZR86_RS13135 0.23 +0.9
2,950,215 - ABZR86_RS13135 0.34 +0.6
2,950,328 - ABZR86_RS13135 0.41 -0.6

Or see this region's nucleotide sequence