Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS10755

Experiment: Paraquat dichloride 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS10750 and ABZR86_RS10755 are separated by 340 nucleotidesABZR86_RS10755 and ABZR86_RS10760 are separated by 289 nucleotidesABZR86_RS10760 and ABZR86_RS10765 are separated by 15 nucleotides ABZR86_RS10750: ABZR86_RS10750 - bifunctional lysylphosphatidylglycerol flippase/synthetase MprF, at 2,388,628 to 2,391,228 _RS10750 ABZR86_RS10755: ABZR86_RS10755 - oligopeptide transporter, OPT family, at 2,391,569 to 2,393,554 _RS10755 ABZR86_RS10760: ABZR86_RS10760 - nuclear transport factor 2 family protein, at 2,393,844 to 2,394,305 _RS10760 ABZR86_RS10765: ABZR86_RS10765 - hypothetical protein, at 2,394,321 to 2,394,785 _RS10765 Position (kb) 2391 2392 2393 2394Strain fitness (log2 ratio) -2 -1 0 1at 2390.614 kb on + strand, within ABZR86_RS10750at 2390.840 kb on + strand, within ABZR86_RS10750at 2390.840 kb on + strand, within ABZR86_RS10750at 2390.840 kb on + strand, within ABZR86_RS10750at 2390.840 kb on + strand, within ABZR86_RS10750at 2390.840 kb on + strand, within ABZR86_RS10750at 2390.840 kb on + strand, within ABZR86_RS10750at 2390.840 kb on + strand, within ABZR86_RS10750at 2390.840 kb on + strand, within ABZR86_RS10750at 2390.840 kb on + strand, within ABZR86_RS10750at 2390.840 kb on + strand, within ABZR86_RS10750at 2390.840 kb on + strand, within ABZR86_RS10750at 2390.840 kb on + strand, within ABZR86_RS10750at 2390.841 kb on - strand, within ABZR86_RS10750at 2390.841 kb on - strand, within ABZR86_RS10750at 2390.841 kb on - strand, within ABZR86_RS10750at 2390.903 kb on + strand, within ABZR86_RS10750at 2390.903 kb on + strand, within ABZR86_RS10750at 2390.978 kb on + strandat 2390.979 kb on - strandat 2390.979 kb on - strandat 2390.979 kb on - strandat 2390.979 kb on - strandat 2390.996 kb on + strandat 2390.996 kb on + strandat 2390.996 kb on + strandat 2390.996 kb on + strandat 2391.056 kb on + strandat 2391.056 kb on + strandat 2391.074 kb on + strandat 2391.075 kb on - strandat 2391.361 kb on + strandat 2391.361 kb on + strandat 2391.361 kb on + strandat 2391.361 kb on + strandat 2391.361 kb on + strandat 2391.361 kb on + strandat 2391.361 kb on + strandat 2391.362 kb on - strandat 2391.362 kb on - strandat 2391.362 kb on - strandat 2391.362 kb on - strandat 2391.477 kb on + strandat 2391.477 kb on + strandat 2391.477 kb on + strandat 2391.478 kb on - strandat 2391.515 kb on + strandat 2391.570 kb on + strandat 2391.570 kb on + strandat 2391.570 kb on + strandat 2391.570 kb on + strandat 2391.571 kb on - strandat 2391.885 kb on + strand, within ABZR86_RS10755at 2391.885 kb on + strand, within ABZR86_RS10755at 2391.885 kb on + strand, within ABZR86_RS10755at 2391.885 kb on + strand, within ABZR86_RS10755at 2391.885 kb on + strand, within ABZR86_RS10755at 2391.885 kb on + strand, within ABZR86_RS10755at 2391.886 kb on - strand, within ABZR86_RS10755at 2391.886 kb on - strand, within ABZR86_RS10755at 2391.886 kb on - strand, within ABZR86_RS10755at 2391.886 kb on - strand, within ABZR86_RS10755at 2392.104 kb on + strand, within ABZR86_RS10755at 2392.104 kb on + strand, within ABZR86_RS10755at 2392.104 kb on + strand, within ABZR86_RS10755at 2392.104 kb on + strand, within ABZR86_RS10755at 2392.323 kb on + strand, within ABZR86_RS10755at 2392.323 kb on + strand, within ABZR86_RS10755at 2392.323 kb on + strand, within ABZR86_RS10755at 2392.323 kb on + strand, within ABZR86_RS10755at 2392.324 kb on - strand, within ABZR86_RS10755at 2392.324 kb on - strand, within ABZR86_RS10755at 2392.324 kb on - strand, within ABZR86_RS10755at 2392.425 kb on + strand, within ABZR86_RS10755at 2392.425 kb on + strand, within ABZR86_RS10755at 2392.425 kb on + strand, within ABZR86_RS10755at 2392.426 kb on - strand, within ABZR86_RS10755at 2392.426 kb on - strand, within ABZR86_RS10755at 2392.426 kb on - strand, within ABZR86_RS10755at 2392.467 kb on + strand, within ABZR86_RS10755at 2392.467 kb on + strand, within ABZR86_RS10755at 2392.467 kb on + strand, within ABZR86_RS10755at 2392.468 kb on - strand, within ABZR86_RS10755at 2392.468 kb on - strand, within ABZR86_RS10755at 2392.468 kb on - strand, within ABZR86_RS10755at 2392.468 kb on - strand, within ABZR86_RS10755at 2392.468 kb on - strand, within ABZR86_RS10755at 2392.468 kb on - strand, within ABZR86_RS10755at 2392.468 kb on - strand, within ABZR86_RS10755at 2392.531 kb on - strand, within ABZR86_RS10755at 2392.818 kb on + strand, within ABZR86_RS10755at 2392.818 kb on + strand, within ABZR86_RS10755at 2392.819 kb on - strand, within ABZR86_RS10755at 2392.819 kb on - strand, within ABZR86_RS10755at 2392.968 kb on + strand, within ABZR86_RS10755at 2392.968 kb on + strand, within ABZR86_RS10755at 2392.968 kb on + strand, within ABZR86_RS10755at 2393.193 kb on + strand, within ABZR86_RS10755at 2393.193 kb on + strand, within ABZR86_RS10755at 2393.193 kb on + strand, within ABZR86_RS10755at 2393.193 kb on + strand, within ABZR86_RS10755at 2393.193 kb on + strand, within ABZR86_RS10755at 2393.194 kb on - strand, within ABZR86_RS10755at 2393.194 kb on - strand, within ABZR86_RS10755at 2393.504 kb on + strandat 2393.505 kb on - strandat 2393.505 kb on - strandat 2393.595 kb on + strandat 2393.595 kb on + strandat 2393.595 kb on + strandat 2393.659 kb on - strandat 2393.812 kb on + strandat 2393.813 kb on - strandat 2394.051 kb on + strand, within ABZR86_RS10760at 2394.052 kb on - strand, within ABZR86_RS10760at 2394.052 kb on - strand, within ABZR86_RS10760at 2394.102 kb on + strand, within ABZR86_RS10760at 2394.102 kb on + strand, within ABZR86_RS10760at 2394.103 kb on - strand, within ABZR86_RS10760at 2394.103 kb on - strand, within ABZR86_RS10760at 2394.103 kb on - strand, within ABZR86_RS10760at 2394.285 kb on + strandat 2394.285 kb on + strandat 2394.285 kb on + strandat 2394.286 kb on - strandat 2394.286 kb on - strandat 2394.406 kb on + strand, within ABZR86_RS10765at 2394.406 kb on + strand, within ABZR86_RS10765at 2394.406 kb on + strand, within ABZR86_RS10765at 2394.406 kb on + strand, within ABZR86_RS10765at 2394.406 kb on + strand, within ABZR86_RS10765

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Per-strain Table

Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml
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2,390,614 + ABZR86_RS10750 0.76 -0.1
2,390,840 + ABZR86_RS10750 0.85 +0.5
2,390,840 + ABZR86_RS10750 0.85 -0.6
2,390,840 + ABZR86_RS10750 0.85 +0.2
2,390,840 + ABZR86_RS10750 0.85 +0.2
2,390,840 + ABZR86_RS10750 0.85 +0.2
2,390,840 + ABZR86_RS10750 0.85 -0.1
2,390,840 + ABZR86_RS10750 0.85 +0.7
2,390,840 + ABZR86_RS10750 0.85 +0.2
2,390,840 + ABZR86_RS10750 0.85 +0.4
2,390,840 + ABZR86_RS10750 0.85 +0.2
2,390,840 + ABZR86_RS10750 0.85 -0.2
2,390,840 + ABZR86_RS10750 0.85 -0.0
2,390,841 - ABZR86_RS10750 0.85 -1.0
2,390,841 - ABZR86_RS10750 0.85 -0.1
2,390,841 - ABZR86_RS10750 0.85 -0.5
2,390,903 + ABZR86_RS10750 0.87 -0.8
2,390,903 + ABZR86_RS10750 0.87 +0.4
2,390,978 + +0.0
2,390,979 - +0.1
2,390,979 - +1.4
2,390,979 - -0.3
2,390,979 - +0.6
2,390,996 + -0.8
2,390,996 + +0.8
2,390,996 + +0.2
2,390,996 + -0.2
2,391,056 + +0.3
2,391,056 + +0.1
2,391,074 + +0.2
2,391,075 - -0.1
2,391,361 + +1.2
2,391,361 + +0.2
2,391,361 + +0.3
2,391,361 + +0.6
2,391,361 + +0.4
2,391,361 + +0.2
2,391,361 + +0.1
2,391,362 - +0.1
2,391,362 - -0.5
2,391,362 - -0.3
2,391,362 - -0.2
2,391,477 + -0.3
2,391,477 + -0.5
2,391,477 + -0.4
2,391,478 - -0.3
2,391,515 + +0.5
2,391,570 + -0.5
2,391,570 + +0.1
2,391,570 + +0.4
2,391,570 + -0.4
2,391,571 - +0.5
2,391,885 + ABZR86_RS10755 0.16 +0.6
2,391,885 + ABZR86_RS10755 0.16 +0.2
2,391,885 + ABZR86_RS10755 0.16 +1.2
2,391,885 + ABZR86_RS10755 0.16 -0.5
2,391,885 + ABZR86_RS10755 0.16 +0.4
2,391,885 + ABZR86_RS10755 0.16 +0.4
2,391,886 - ABZR86_RS10755 0.16 -0.5
2,391,886 - ABZR86_RS10755 0.16 -0.2
2,391,886 - ABZR86_RS10755 0.16 -0.3
2,391,886 - ABZR86_RS10755 0.16 -0.0
2,392,104 + ABZR86_RS10755 0.27 -0.3
2,392,104 + ABZR86_RS10755 0.27 +0.6
2,392,104 + ABZR86_RS10755 0.27 +0.5
2,392,104 + ABZR86_RS10755 0.27 +0.4
2,392,323 + ABZR86_RS10755 0.38 -0.4
2,392,323 + ABZR86_RS10755 0.38 -1.5
2,392,323 + ABZR86_RS10755 0.38 +0.7
2,392,323 + ABZR86_RS10755 0.38 -0.3
2,392,324 - ABZR86_RS10755 0.38 +0.2
2,392,324 - ABZR86_RS10755 0.38 +0.1
2,392,324 - ABZR86_RS10755 0.38 +0.1
2,392,425 + ABZR86_RS10755 0.43 +0.9
2,392,425 + ABZR86_RS10755 0.43 +0.1
2,392,425 + ABZR86_RS10755 0.43 +0.6
2,392,426 - ABZR86_RS10755 0.43 +0.1
2,392,426 - ABZR86_RS10755 0.43 -1.1
2,392,426 - ABZR86_RS10755 0.43 -0.1
2,392,467 + ABZR86_RS10755 0.45 +0.2
2,392,467 + ABZR86_RS10755 0.45 -0.0
2,392,467 + ABZR86_RS10755 0.45 +0.2
2,392,468 - ABZR86_RS10755 0.45 +0.4
2,392,468 - ABZR86_RS10755 0.45 -0.2
2,392,468 - ABZR86_RS10755 0.45 +0.3
2,392,468 - ABZR86_RS10755 0.45 +0.4
2,392,468 - ABZR86_RS10755 0.45 +0.4
2,392,468 - ABZR86_RS10755 0.45 -0.1
2,392,468 - ABZR86_RS10755 0.45 +0.8
2,392,531 - ABZR86_RS10755 0.48 +0.2
2,392,818 + ABZR86_RS10755 0.63 +0.0
2,392,818 + ABZR86_RS10755 0.63 +0.3
2,392,819 - ABZR86_RS10755 0.63 -0.0
2,392,819 - ABZR86_RS10755 0.63 -0.1
2,392,968 + ABZR86_RS10755 0.70 +0.7
2,392,968 + ABZR86_RS10755 0.70 -0.1
2,392,968 + ABZR86_RS10755 0.70 -0.6
2,393,193 + ABZR86_RS10755 0.82 -0.2
2,393,193 + ABZR86_RS10755 0.82 +0.4
2,393,193 + ABZR86_RS10755 0.82 +1.4
2,393,193 + ABZR86_RS10755 0.82 -0.0
2,393,193 + ABZR86_RS10755 0.82 +0.9
2,393,194 - ABZR86_RS10755 0.82 -0.6
2,393,194 - ABZR86_RS10755 0.82 -0.2
2,393,504 + +0.9
2,393,505 - +0.3
2,393,505 - -0.4
2,393,595 + -0.6
2,393,595 + -0.1
2,393,595 + +0.5
2,393,659 - -1.3
2,393,812 + -0.9
2,393,813 - -0.3
2,394,051 + ABZR86_RS10760 0.45 +0.7
2,394,052 - ABZR86_RS10760 0.45 +0.4
2,394,052 - ABZR86_RS10760 0.45 -0.8
2,394,102 + ABZR86_RS10760 0.56 -0.6
2,394,102 + ABZR86_RS10760 0.56 +0.2
2,394,103 - ABZR86_RS10760 0.56 +0.1
2,394,103 - ABZR86_RS10760 0.56 -2.5
2,394,103 - ABZR86_RS10760 0.56 -0.1
2,394,285 + +1.0
2,394,285 + +0.0
2,394,285 + +0.5
2,394,286 - +0.6
2,394,286 - -0.9
2,394,406 + ABZR86_RS10765 0.18 -0.3
2,394,406 + ABZR86_RS10765 0.18 +0.3
2,394,406 + ABZR86_RS10765 0.18 +0.1
2,394,406 + ABZR86_RS10765 0.18 -0.1
2,394,406 + ABZR86_RS10765 0.18 -0.8

Or see this region's nucleotide sequence