Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS10210 and ABZR86_RS10215 are separated by 9 nucleotides ABZR86_RS10215 and ABZR86_RS10220 overlap by 4 nucleotides ABZR86_RS10220 and ABZR86_RS10225 are separated by 65 nucleotides
ABZR86_RS10210: ABZR86_RS10210 - ADP compounds hydrolase NudE, at 2,266,347 to 2,266,904
_RS10210
ABZR86_RS10215: ABZR86_RS10215 - inositol monophosphatase family protein, at 2,266,914 to 2,267,702
_RS10215
ABZR86_RS10220: ABZR86_RS10220 - type II secretion system protein N, at 2,267,699 to 2,268,478
_RS10220
ABZR86_RS10225: ABZR86_RS10225 - adenosylmethionine--8-amino-7-oxononanoate transaminase, at 2,268,544 to 2,269,911
_RS10225
Position (kb)
2267
2268
2269 Strain fitness (log2 ratio)
-2
-1
0
1 at 2266.799 kb on - strand, within ABZR86_RS10210 at 2266.916 kb on - strand at 2266.916 kb on - strand at 2266.916 kb on - strand at 2266.923 kb on + strand at 2267.131 kb on + strand, within ABZR86_RS10215 at 2267.132 kb on - strand, within ABZR86_RS10215 at 2267.336 kb on - strand, within ABZR86_RS10215 at 2267.500 kb on + strand, within ABZR86_RS10215 at 2267.500 kb on + strand, within ABZR86_RS10215 at 2267.501 kb on - strand, within ABZR86_RS10215 at 2267.501 kb on - strand, within ABZR86_RS10215 at 2267.501 kb on - strand, within ABZR86_RS10215 at 2267.501 kb on - strand, within ABZR86_RS10215 at 2267.828 kb on - strand, within ABZR86_RS10220 at 2267.841 kb on + strand, within ABZR86_RS10220 at 2268.412 kb on - strand at 2268.412 kb on - strand at 2268.703 kb on + strand, within ABZR86_RS10225 at 2268.704 kb on - strand, within ABZR86_RS10225 at 2268.704 kb on - strand, within ABZR86_RS10225 at 2268.738 kb on - strand, within ABZR86_RS10225 at 2268.789 kb on + strand, within ABZR86_RS10225 at 2268.789 kb on + strand, within ABZR86_RS10225 at 2268.947 kb on - strand, within ABZR86_RS10225 at 2269.004 kb on - strand, within ABZR86_RS10225 at 2269.004 kb on - strand, within ABZR86_RS10225 at 2269.004 kb on - strand, within ABZR86_RS10225 at 2269.063 kb on + strand, within ABZR86_RS10225 at 2269.063 kb on + strand, within ABZR86_RS10225 at 2269.063 kb on + strand, within ABZR86_RS10225 at 2269.063 kb on + strand, within ABZR86_RS10225 at 2269.063 kb on + strand, within ABZR86_RS10225 at 2269.063 kb on + strand, within ABZR86_RS10225 at 2269.063 kb on + strand, within ABZR86_RS10225 at 2269.064 kb on - strand, within ABZR86_RS10225 at 2269.112 kb on - strand, within ABZR86_RS10225 at 2269.112 kb on - strand, within ABZR86_RS10225 at 2269.255 kb on + strand, within ABZR86_RS10225 at 2269.255 kb on + strand, within ABZR86_RS10225 at 2269.255 kb on + strand, within ABZR86_RS10225 at 2269.255 kb on + strand, within ABZR86_RS10225 at 2269.255 kb on + strand, within ABZR86_RS10225 at 2269.255 kb on + strand, within ABZR86_RS10225 at 2269.256 kb on - strand, within ABZR86_RS10225 at 2269.256 kb on - strand, within ABZR86_RS10225 at 2269.268 kb on - strand, within ABZR86_RS10225 at 2269.465 kb on + strand, within ABZR86_RS10225 at 2269.466 kb on - strand, within ABZR86_RS10225 at 2269.477 kb on + strand, within ABZR86_RS10225 at 2269.477 kb on + strand, within ABZR86_RS10225 at 2269.477 kb on + strand, within ABZR86_RS10225
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 2,266,799 - ABZR86_RS10210 0.81 -1.0 2,266,916 - -1.0 2,266,916 - +0.0 2,266,916 - -0.6 2,266,923 + +0.1 2,267,131 + ABZR86_RS10215 0.28 -0.7 2,267,132 - ABZR86_RS10215 0.28 +0.1 2,267,336 - ABZR86_RS10215 0.53 +0.8 2,267,500 + ABZR86_RS10215 0.74 +0.1 2,267,500 + ABZR86_RS10215 0.74 +0.6 2,267,501 - ABZR86_RS10215 0.74 -0.1 2,267,501 - ABZR86_RS10215 0.74 -0.1 2,267,501 - ABZR86_RS10215 0.74 +0.2 2,267,501 - ABZR86_RS10215 0.74 -1.2 2,267,828 - ABZR86_RS10220 0.17 -0.8 2,267,841 + ABZR86_RS10220 0.18 +0.0 2,268,412 - +0.4 2,268,412 - +0.2 2,268,703 + ABZR86_RS10225 0.12 -0.5 2,268,704 - ABZR86_RS10225 0.12 +0.2 2,268,704 - ABZR86_RS10225 0.12 -0.3 2,268,738 - ABZR86_RS10225 0.14 +0.0 2,268,789 + ABZR86_RS10225 0.18 +0.2 2,268,789 + ABZR86_RS10225 0.18 -0.1 2,268,947 - ABZR86_RS10225 0.29 -0.5 2,269,004 - ABZR86_RS10225 0.34 +0.0 2,269,004 - ABZR86_RS10225 0.34 +0.6 2,269,004 - ABZR86_RS10225 0.34 +0.4 2,269,063 + ABZR86_RS10225 0.38 +1.1 2,269,063 + ABZR86_RS10225 0.38 -0.4 2,269,063 + ABZR86_RS10225 0.38 +0.4 2,269,063 + ABZR86_RS10225 0.38 -0.3 2,269,063 + ABZR86_RS10225 0.38 +0.2 2,269,063 + ABZR86_RS10225 0.38 +0.1 2,269,063 + ABZR86_RS10225 0.38 +0.1 2,269,064 - ABZR86_RS10225 0.38 -0.3 2,269,112 - ABZR86_RS10225 0.42 -2.1 2,269,112 - ABZR86_RS10225 0.42 +0.3 2,269,255 + ABZR86_RS10225 0.52 -0.8 2,269,255 + ABZR86_RS10225 0.52 +0.1 2,269,255 + ABZR86_RS10225 0.52 +1.1 2,269,255 + ABZR86_RS10225 0.52 +0.1 2,269,255 + ABZR86_RS10225 0.52 +0.8 2,269,255 + ABZR86_RS10225 0.52 -0.2 2,269,256 - ABZR86_RS10225 0.52 +0.2 2,269,256 - ABZR86_RS10225 0.52 +0.0 2,269,268 - ABZR86_RS10225 0.53 +0.5 2,269,465 + ABZR86_RS10225 0.67 -0.6 2,269,466 - ABZR86_RS10225 0.67 +0.3 2,269,477 + ABZR86_RS10225 0.68 +0.7 2,269,477 + ABZR86_RS10225 0.68 +0.4 2,269,477 + ABZR86_RS10225 0.68 +0.4
Or see this region's nucleotide sequence