Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS10150 and ABZR86_RS10155 are separated by 145 nucleotides ABZR86_RS10155 and ABZR86_RS10160 are separated by 166 nucleotides ABZR86_RS10160 and ABZR86_RS10165 are separated by 109 nucleotides
ABZR86_RS10150: ABZR86_RS10150 - 3-oxoacid CoA-transferase, at 2,253,953 to 2,255,308
_RS10150
ABZR86_RS10155: ABZR86_RS10155 - HAMP domain-containing sensor histidine kinase, at 2,255,454 to 2,256,374
_RS10155
ABZR86_RS10160: ABZR86_RS10160 - response regulator transcription factor, at 2,256,541 to 2,257,239
_RS10160
ABZR86_RS10165: ABZR86_RS10165 - arylesterase, at 2,257,349 to 2,257,978
_RS10165
Position (kb)
2255
2256
2257 Strain fitness (log2 ratio)
-2
-1
0
1 at 2254.576 kb on + strand, within ABZR86_RS10150 at 2254.580 kb on + strand, within ABZR86_RS10150 at 2254.580 kb on + strand, within ABZR86_RS10150 at 2254.580 kb on + strand, within ABZR86_RS10150 at 2254.580 kb on + strand, within ABZR86_RS10150 at 2254.580 kb on + strand, within ABZR86_RS10150 at 2254.580 kb on + strand, within ABZR86_RS10150 at 2254.580 kb on + strand, within ABZR86_RS10150 at 2254.580 kb on + strand, within ABZR86_RS10150 at 2254.580 kb on + strand, within ABZR86_RS10150 at 2254.580 kb on + strand, within ABZR86_RS10150 at 2254.580 kb on + strand, within ABZR86_RS10150 at 2254.581 kb on - strand, within ABZR86_RS10150 at 2254.581 kb on - strand, within ABZR86_RS10150 at 2254.581 kb on - strand, within ABZR86_RS10150 at 2254.581 kb on - strand, within ABZR86_RS10150 at 2254.581 kb on - strand, within ABZR86_RS10150 at 2254.581 kb on - strand, within ABZR86_RS10150 at 2254.581 kb on - strand, within ABZR86_RS10150 at 2254.581 kb on - strand, within ABZR86_RS10150 at 2254.581 kb on - strand, within ABZR86_RS10150 at 2254.581 kb on - strand, within ABZR86_RS10150 at 2254.581 kb on - strand, within ABZR86_RS10150 at 2254.611 kb on - strand, within ABZR86_RS10150 at 2254.721 kb on + strand, within ABZR86_RS10150 at 2254.722 kb on - strand, within ABZR86_RS10150 at 2255.455 kb on + strand at 2255.455 kb on + strand at 2255.455 kb on + strand at 2256.101 kb on - strand, within ABZR86_RS10155 at 2256.443 kb on + strand at 2256.443 kb on + strand at 2256.443 kb on + strand at 2256.444 kb on - strand at 2256.444 kb on - strand at 2256.444 kb on - strand at 2256.629 kb on + strand, within ABZR86_RS10160 at 2256.629 kb on + strand, within ABZR86_RS10160 at 2256.629 kb on + strand, within ABZR86_RS10160 at 2256.629 kb on + strand, within ABZR86_RS10160 at 2256.629 kb on + strand, within ABZR86_RS10160 at 2256.630 kb on - strand, within ABZR86_RS10160 at 2256.921 kb on - strand, within ABZR86_RS10160 at 2256.921 kb on - strand, within ABZR86_RS10160 at 2256.921 kb on - strand, within ABZR86_RS10160 at 2256.921 kb on - strand, within ABZR86_RS10160 at 2257.082 kb on + strand, within ABZR86_RS10160 at 2257.082 kb on + strand, within ABZR86_RS10160 at 2257.082 kb on + strand, within ABZR86_RS10160 at 2257.082 kb on + strand, within ABZR86_RS10160 at 2257.082 kb on + strand, within ABZR86_RS10160 at 2257.082 kb on + strand, within ABZR86_RS10160 at 2257.082 kb on + strand, within ABZR86_RS10160 at 2257.082 kb on + strand, within ABZR86_RS10160 at 2257.082 kb on + strand, within ABZR86_RS10160 at 2257.082 kb on + strand, within ABZR86_RS10160 at 2257.083 kb on - strand, within ABZR86_RS10160 at 2257.083 kb on - strand, within ABZR86_RS10160 at 2257.130 kb on + strand, within ABZR86_RS10160 at 2257.130 kb on + strand, within ABZR86_RS10160 at 2257.130 kb on + strand, within ABZR86_RS10160 at 2257.130 kb on + strand, within ABZR86_RS10160 at 2257.131 kb on - strand, within ABZR86_RS10160 at 2257.142 kb on + strand, within ABZR86_RS10160 at 2257.142 kb on + strand, within ABZR86_RS10160 at 2257.244 kb on + strand at 2257.244 kb on + strand at 2257.245 kb on - strand at 2257.245 kb on - strand at 2257.245 kb on - strand at 2257.251 kb on + strand at 2257.251 kb on + strand at 2257.251 kb on + strand at 2257.251 kb on + strand at 2257.251 kb on + strand at 2257.252 kb on - strand at 2257.252 kb on - strand at 2257.275 kb on - strand at 2257.293 kb on + strand at 2257.293 kb on + strand at 2257.293 kb on + strand at 2257.293 kb on + strand at 2257.293 kb on + strand at 2257.294 kb on - strand at 2257.342 kb on + strand at 2257.343 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 2,254,576 + ABZR86_RS10150 0.46 -0.8 2,254,580 + ABZR86_RS10150 0.46 -0.6 2,254,580 + ABZR86_RS10150 0.46 -0.7 2,254,580 + ABZR86_RS10150 0.46 +0.2 2,254,580 + ABZR86_RS10150 0.46 -0.0 2,254,580 + ABZR86_RS10150 0.46 -0.1 2,254,580 + ABZR86_RS10150 0.46 +0.3 2,254,580 + ABZR86_RS10150 0.46 +0.0 2,254,580 + ABZR86_RS10150 0.46 -1.0 2,254,580 + ABZR86_RS10150 0.46 -1.4 2,254,580 + ABZR86_RS10150 0.46 +0.4 2,254,580 + ABZR86_RS10150 0.46 -0.3 2,254,581 - ABZR86_RS10150 0.46 -1.4 2,254,581 - ABZR86_RS10150 0.46 -0.8 2,254,581 - ABZR86_RS10150 0.46 -0.2 2,254,581 - ABZR86_RS10150 0.46 -0.8 2,254,581 - ABZR86_RS10150 0.46 +0.0 2,254,581 - ABZR86_RS10150 0.46 -0.1 2,254,581 - ABZR86_RS10150 0.46 +0.1 2,254,581 - ABZR86_RS10150 0.46 -2.2 2,254,581 - ABZR86_RS10150 0.46 -0.4 2,254,581 - ABZR86_RS10150 0.46 +0.2 2,254,581 - ABZR86_RS10150 0.46 -0.0 2,254,611 - ABZR86_RS10150 0.49 -0.9 2,254,721 + ABZR86_RS10150 0.57 -0.1 2,254,722 - ABZR86_RS10150 0.57 -1.7 2,255,455 + -0.1 2,255,455 + +0.0 2,255,455 + -0.3 2,256,101 - ABZR86_RS10155 0.70 -0.6 2,256,443 + -0.2 2,256,443 + +0.2 2,256,443 + -0.0 2,256,444 - +0.5 2,256,444 - +0.6 2,256,444 - -0.5 2,256,629 + ABZR86_RS10160 0.13 +0.2 2,256,629 + ABZR86_RS10160 0.13 +0.4 2,256,629 + ABZR86_RS10160 0.13 +0.3 2,256,629 + ABZR86_RS10160 0.13 -0.9 2,256,629 + ABZR86_RS10160 0.13 +0.5 2,256,630 - ABZR86_RS10160 0.13 +0.3 2,256,921 - ABZR86_RS10160 0.54 -0.7 2,256,921 - ABZR86_RS10160 0.54 -0.3 2,256,921 - ABZR86_RS10160 0.54 -0.9 2,256,921 - ABZR86_RS10160 0.54 -0.7 2,257,082 + ABZR86_RS10160 0.77 +0.4 2,257,082 + ABZR86_RS10160 0.77 -0.8 2,257,082 + ABZR86_RS10160 0.77 -0.2 2,257,082 + ABZR86_RS10160 0.77 +0.1 2,257,082 + ABZR86_RS10160 0.77 -0.1 2,257,082 + ABZR86_RS10160 0.77 +0.2 2,257,082 + ABZR86_RS10160 0.77 +0.4 2,257,082 + ABZR86_RS10160 0.77 -0.4 2,257,082 + ABZR86_RS10160 0.77 +0.2 2,257,082 + ABZR86_RS10160 0.77 -0.0 2,257,083 - ABZR86_RS10160 0.78 -0.8 2,257,083 - ABZR86_RS10160 0.78 +0.1 2,257,130 + ABZR86_RS10160 0.84 -1.0 2,257,130 + ABZR86_RS10160 0.84 +0.4 2,257,130 + ABZR86_RS10160 0.84 +0.2 2,257,130 + ABZR86_RS10160 0.84 -0.0 2,257,131 - ABZR86_RS10160 0.84 +0.5 2,257,142 + ABZR86_RS10160 0.86 +0.2 2,257,142 + ABZR86_RS10160 0.86 +0.3 2,257,244 + -0.6 2,257,244 + +0.4 2,257,245 - -0.9 2,257,245 - -1.7 2,257,245 - -0.0 2,257,251 + +0.4 2,257,251 + -0.4 2,257,251 + +0.2 2,257,251 + +0.2 2,257,251 + +0.1 2,257,252 - -0.2 2,257,252 - -0.1 2,257,275 - +0.6 2,257,293 + +0.2 2,257,293 + -0.4 2,257,293 + -0.1 2,257,293 + -0.2 2,257,293 + -0.7 2,257,294 - +0.5 2,257,342 + +0.3 2,257,343 - +0.2
Or see this region's nucleotide sequence