Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS04815 and ABZR86_RS04820 are separated by 8 nucleotides ABZR86_RS04820 and ABZR86_RS04825 are separated by 3 nucleotides ABZR86_RS04825 and ABZR86_RS04830 are separated by 11 nucleotides
ABZR86_RS04815: ABZR86_RS04815 - hypothetical protein, at 1,078,192 to 1,079,061
_RS04815
ABZR86_RS04820: ABZR86_RS04820 - N-acetyltransferase, at 1,079,070 to 1,079,513
_RS04820
ABZR86_RS04825: ABZR86_RS04825 - NmrA family NAD(P)-binding protein, at 1,079,517 to 1,080,470
_RS04825
ABZR86_RS04830: ABZR86_RS04830 - LysR family transcriptional regulator, at 1,080,482 to 1,081,399
_RS04830
Position (kb)
1079
1080
1081 Strain fitness (log2 ratio)
-2
-1
0
1 at 1078.651 kb on + strand, within ABZR86_RS04815 at 1078.674 kb on + strand, within ABZR86_RS04815 at 1078.674 kb on + strand, within ABZR86_RS04815 at 1078.718 kb on - strand, within ABZR86_RS04815 at 1078.865 kb on - strand, within ABZR86_RS04815 at 1078.921 kb on + strand, within ABZR86_RS04815 at 1078.921 kb on + strand, within ABZR86_RS04815 at 1078.922 kb on - strand, within ABZR86_RS04815 at 1078.924 kb on + strand, within ABZR86_RS04815 at 1078.925 kb on - strand, within ABZR86_RS04815 at 1079.190 kb on + strand, within ABZR86_RS04820 at 1079.286 kb on - strand, within ABZR86_RS04820 at 1079.298 kb on + strand, within ABZR86_RS04820 at 1079.298 kb on + strand, within ABZR86_RS04820 at 1079.299 kb on - strand, within ABZR86_RS04820 at 1079.299 kb on - strand, within ABZR86_RS04820 at 1079.299 kb on - strand, within ABZR86_RS04820 at 1079.299 kb on - strand, within ABZR86_RS04820 at 1080.221 kb on - strand, within ABZR86_RS04825 at 1080.367 kb on + strand, within ABZR86_RS04825 at 1080.367 kb on + strand, within ABZR86_RS04825 at 1080.368 kb on - strand, within ABZR86_RS04825 at 1080.765 kb on + strand, within ABZR86_RS04830 at 1081.010 kb on + strand, within ABZR86_RS04830 at 1081.011 kb on - strand, within ABZR86_RS04830 at 1081.106 kb on + strand, within ABZR86_RS04830 at 1081.106 kb on + strand, within ABZR86_RS04830 at 1081.106 kb on + strand, within ABZR86_RS04830 at 1081.107 kb on - strand, within ABZR86_RS04830 at 1081.107 kb on - strand, within ABZR86_RS04830 at 1081.107 kb on - strand, within ABZR86_RS04830 at 1081.313 kb on + strand at 1081.313 kb on + strand at 1081.313 kb on + strand at 1081.314 kb on - strand at 1081.322 kb on + strand at 1081.323 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 1,078,651 + ABZR86_RS04815 0.53 -0.6 1,078,674 + ABZR86_RS04815 0.55 +0.2 1,078,674 + ABZR86_RS04815 0.55 -0.8 1,078,718 - ABZR86_RS04815 0.60 -0.1 1,078,865 - ABZR86_RS04815 0.77 -0.4 1,078,921 + ABZR86_RS04815 0.84 -0.6 1,078,921 + ABZR86_RS04815 0.84 +0.2 1,078,922 - ABZR86_RS04815 0.84 +0.1 1,078,924 + ABZR86_RS04815 0.84 -1.0 1,078,925 - ABZR86_RS04815 0.84 +0.2 1,079,190 + ABZR86_RS04820 0.27 -0.4 1,079,286 - ABZR86_RS04820 0.49 +1.1 1,079,298 + ABZR86_RS04820 0.51 +0.3 1,079,298 + ABZR86_RS04820 0.51 -0.2 1,079,299 - ABZR86_RS04820 0.52 +0.4 1,079,299 - ABZR86_RS04820 0.52 +1.1 1,079,299 - ABZR86_RS04820 0.52 +0.3 1,079,299 - ABZR86_RS04820 0.52 -0.1 1,080,221 - ABZR86_RS04825 0.74 -0.5 1,080,367 + ABZR86_RS04825 0.89 -0.8 1,080,367 + ABZR86_RS04825 0.89 -0.3 1,080,368 - ABZR86_RS04825 0.89 -0.5 1,080,765 + ABZR86_RS04830 0.31 -0.6 1,081,010 + ABZR86_RS04830 0.58 -0.5 1,081,011 - ABZR86_RS04830 0.58 -1.1 1,081,106 + ABZR86_RS04830 0.68 +0.2 1,081,106 + ABZR86_RS04830 0.68 -0.2 1,081,106 + ABZR86_RS04830 0.68 -1.8 1,081,107 - ABZR86_RS04830 0.68 +0.0 1,081,107 - ABZR86_RS04830 0.68 -0.0 1,081,107 - ABZR86_RS04830 0.68 +0.1 1,081,313 + -1.0 1,081,313 + +0.1 1,081,313 + +0.4 1,081,314 - +0.1 1,081,322 + +0.2 1,081,323 - -0.6
Or see this region's nucleotide sequence