Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS03740 and ABZR86_RS03745 are separated by 134 nucleotides ABZR86_RS03745 and ABZR86_RS03750 are separated by 162 nucleotides ABZR86_RS03750 and ABZR86_RS03755 are separated by 8 nucleotides ABZR86_RS03755 and ABZR86_RS03760 are separated by 79 nucleotides
ABZR86_RS03740: ABZR86_RS03740 - response regulator transcription factor, at 816,448 to 816,861
_RS03740
ABZR86_RS03745: ABZR86_RS03745 - nuclear transport factor 2 family protein, at 816,996 to 817,508
_RS03745
ABZR86_RS03750: ABZR86_RS03750 - hypothetical protein, at 817,671 to 817,895
_RS03750
ABZR86_RS03755: ABZR86_RS03755 - TetR/AcrR family transcriptional regulator, at 817,904 to 818,512
_RS03755
ABZR86_RS03760: ABZR86_RS03760 - hypothetical protein, at 818,592 to 818,993
_RS03760
Position (kb) 817
818 Strain fitness (log2 ratio) -1
0
1 at 816.755 kb on + strand, within ABZR86_RS03740 at 816.755 kb on + strand, within ABZR86_RS03740 at 816.755 kb on + strand, within ABZR86_RS03740 at 816.755 kb on + strand, within ABZR86_RS03740 at 816.755 kb on + strand, within ABZR86_RS03740 at 816.755 kb on + strand, within ABZR86_RS03740 at 816.755 kb on + strand, within ABZR86_RS03740 at 816.755 kb on + strand, within ABZR86_RS03740 at 816.756 kb on - strand, within ABZR86_RS03740 at 816.756 kb on - strand, within ABZR86_RS03740 at 816.756 kb on - strand, within ABZR86_RS03740 at 816.756 kb on - strand, within ABZR86_RS03740 at 816.756 kb on - strand, within ABZR86_RS03740 at 816.791 kb on + strand, within ABZR86_RS03740 at 816.792 kb on - strand, within ABZR86_RS03740 at 816.792 kb on - strand, within ABZR86_RS03740 at 816.897 kb on - strand at 816.897 kb on - strand at 816.906 kb on - strand at 816.968 kb on + strand at 816.968 kb on + strand at 816.968 kb on + strand at 816.968 kb on + strand at 816.968 kb on + strand at 817.058 kb on + strand, within ABZR86_RS03745 at 817.058 kb on + strand, within ABZR86_RS03745 at 817.059 kb on - strand, within ABZR86_RS03745 at 817.069 kb on + strand, within ABZR86_RS03745 at 817.070 kb on - strand, within ABZR86_RS03745 at 817.070 kb on - strand, within ABZR86_RS03745 at 817.137 kb on + strand, within ABZR86_RS03745 at 817.138 kb on - strand, within ABZR86_RS03745 at 817.239 kb on + strand, within ABZR86_RS03745 at 817.335 kb on + strand, within ABZR86_RS03745 at 817.550 kb on - strand at 817.550 kb on - strand at 817.550 kb on - strand at 817.550 kb on - strand at 817.743 kb on + strand, within ABZR86_RS03750 at 817.743 kb on + strand, within ABZR86_RS03750 at 817.743 kb on + strand, within ABZR86_RS03750 at 817.744 kb on - strand, within ABZR86_RS03750 at 817.777 kb on - strand, within ABZR86_RS03750 at 817.866 kb on + strand, within ABZR86_RS03750 at 817.866 kb on + strand, within ABZR86_RS03750 at 817.875 kb on + strand at 817.876 kb on - strand at 817.995 kb on + strand, within ABZR86_RS03755 at 818.150 kb on + strand, within ABZR86_RS03755 at 818.150 kb on + strand, within ABZR86_RS03755 at 818.150 kb on + strand, within ABZR86_RS03755 at 818.151 kb on - strand, within ABZR86_RS03755 at 818.151 kb on - strand, within ABZR86_RS03755 at 818.346 kb on + strand, within ABZR86_RS03755 at 818.346 kb on + strand, within ABZR86_RS03755 at 818.346 kb on + strand, within ABZR86_RS03755 at 818.496 kb on + strand at 818.496 kb on + strand at 818.496 kb on + strand at 818.497 kb on - strand at 818.497 kb on - strand at 818.567 kb on + strand at 818.567 kb on + strand at 818.567 kb on + strand at 818.568 kb on - strand at 818.598 kb on + strand at 818.599 kb on - strand at 818.599 kb on - strand at 818.602 kb on + strand at 818.603 kb on - strand at 818.603 kb on - strand at 818.603 kb on - strand at 818.611 kb on + strand at 818.612 kb on - strand at 818.612 kb on - strand at 818.751 kb on + strand, within ABZR86_RS03760
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 816,755 + ABZR86_RS03740 0.74 -0.3 816,755 + ABZR86_RS03740 0.74 +1.2 816,755 + ABZR86_RS03740 0.74 -0.0 816,755 + ABZR86_RS03740 0.74 +0.2 816,755 + ABZR86_RS03740 0.74 +0.7 816,755 + ABZR86_RS03740 0.74 -0.1 816,755 + ABZR86_RS03740 0.74 +0.0 816,755 + ABZR86_RS03740 0.74 +0.5 816,756 - ABZR86_RS03740 0.74 +0.1 816,756 - ABZR86_RS03740 0.74 -0.1 816,756 - ABZR86_RS03740 0.74 -0.5 816,756 - ABZR86_RS03740 0.74 -0.6 816,756 - ABZR86_RS03740 0.74 +0.2 816,791 + ABZR86_RS03740 0.83 +0.8 816,792 - ABZR86_RS03740 0.83 -0.1 816,792 - ABZR86_RS03740 0.83 -0.8 816,897 - +0.4 816,897 - -0.3 816,906 - +0.7 816,968 + -0.7 816,968 + -1.7 816,968 + -0.7 816,968 + -0.4 816,968 + -0.6 817,058 + ABZR86_RS03745 0.12 +0.3 817,058 + ABZR86_RS03745 0.12 -0.2 817,059 - ABZR86_RS03745 0.12 +0.0 817,069 + ABZR86_RS03745 0.14 +1.1 817,070 - ABZR86_RS03745 0.14 +1.4 817,070 - ABZR86_RS03745 0.14 -0.2 817,137 + ABZR86_RS03745 0.27 +0.5 817,138 - ABZR86_RS03745 0.28 -0.6 817,239 + ABZR86_RS03745 0.47 -0.2 817,335 + ABZR86_RS03745 0.66 +0.7 817,550 - +0.2 817,550 - -0.6 817,550 - +1.1 817,550 - -0.5 817,743 + ABZR86_RS03750 0.32 +0.2 817,743 + ABZR86_RS03750 0.32 -0.5 817,743 + ABZR86_RS03750 0.32 -0.1 817,744 - ABZR86_RS03750 0.32 -0.4 817,777 - ABZR86_RS03750 0.47 -0.4 817,866 + ABZR86_RS03750 0.87 -1.4 817,866 + ABZR86_RS03750 0.87 -0.4 817,875 + -0.4 817,876 - -0.0 817,995 + ABZR86_RS03755 0.15 -0.0 818,150 + ABZR86_RS03755 0.40 -0.1 818,150 + ABZR86_RS03755 0.40 -0.2 818,150 + ABZR86_RS03755 0.40 -0.1 818,151 - ABZR86_RS03755 0.41 +0.0 818,151 - ABZR86_RS03755 0.41 +0.4 818,346 + ABZR86_RS03755 0.73 +0.4 818,346 + ABZR86_RS03755 0.73 +0.2 818,346 + ABZR86_RS03755 0.73 +0.1 818,496 + -0.2 818,496 + -0.4 818,496 + -0.8 818,497 - +0.6 818,497 - -0.2 818,567 + +0.9 818,567 + +0.0 818,567 + -0.0 818,568 - +0.1 818,598 + +0.6 818,599 - +0.2 818,599 - -0.1 818,602 + -0.5 818,603 - -0.6 818,603 - +0.8 818,603 - +0.4 818,611 + +0.6 818,612 - -0.3 818,612 - +0.8 818,751 + ABZR86_RS03760 0.40 -0.4
Or see this region's nucleotide sequence