Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS03685

Experiment: Paraquat dichloride 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS03680 and ABZR86_RS03685 are separated by 139 nucleotidesABZR86_RS03685 and ABZR86_RS03690 are separated by 294 nucleotides ABZR86_RS03680: ABZR86_RS03680 - FAD-dependent monooxygenase, at 804,054 to 805,571 _RS03680 ABZR86_RS03685: ABZR86_RS03685 - hypothetical protein, at 805,711 to 806,055 _RS03685 ABZR86_RS03690: ABZR86_RS03690 - DUF262 domain-containing protein, at 806,350 to 808,275 _RS03690 Position (kb) 805 806 807Strain fitness (log2 ratio) -1 0 1 2at 804.715 kb on - strand, within ABZR86_RS03680at 804.715 kb on - strand, within ABZR86_RS03680at 804.732 kb on + strand, within ABZR86_RS03680at 804.732 kb on + strand, within ABZR86_RS03680at 804.732 kb on + strand, within ABZR86_RS03680at 804.732 kb on + strand, within ABZR86_RS03680at 804.733 kb on - strand, within ABZR86_RS03680at 804.733 kb on - strand, within ABZR86_RS03680at 804.733 kb on - strand, within ABZR86_RS03680at 804.733 kb on - strand, within ABZR86_RS03680at 804.733 kb on - strand, within ABZR86_RS03680at 804.733 kb on - strand, within ABZR86_RS03680at 804.738 kb on + strand, within ABZR86_RS03680at 804.738 kb on + strand, within ABZR86_RS03680at 804.738 kb on + strand, within ABZR86_RS03680at 804.739 kb on - strand, within ABZR86_RS03680at 804.739 kb on - strand, within ABZR86_RS03680at 804.739 kb on - strand, within ABZR86_RS03680at 804.806 kb on + strand, within ABZR86_RS03680at 804.806 kb on + strand, within ABZR86_RS03680at 804.829 kb on + strand, within ABZR86_RS03680at 804.830 kb on - strand, within ABZR86_RS03680at 804.830 kb on - strand, within ABZR86_RS03680at 804.830 kb on - strand, within ABZR86_RS03680at 804.918 kb on + strand, within ABZR86_RS03680at 804.918 kb on + strand, within ABZR86_RS03680at 805.077 kb on + strand, within ABZR86_RS03680at 805.077 kb on + strand, within ABZR86_RS03680at 805.077 kb on + strand, within ABZR86_RS03680at 805.077 kb on + strand, within ABZR86_RS03680at 805.077 kb on + strand, within ABZR86_RS03680at 805.077 kb on + strand, within ABZR86_RS03680at 805.077 kb on + strand, within ABZR86_RS03680at 805.078 kb on - strand, within ABZR86_RS03680at 805.078 kb on - strand, within ABZR86_RS03680at 805.079 kb on + strand, within ABZR86_RS03680at 805.080 kb on - strand, within ABZR86_RS03680at 805.080 kb on - strand, within ABZR86_RS03680at 805.080 kb on - strand, within ABZR86_RS03680at 805.218 kb on + strand, within ABZR86_RS03680at 805.219 kb on - strand, within ABZR86_RS03680at 805.219 kb on - strand, within ABZR86_RS03680at 805.219 kb on - strand, within ABZR86_RS03680at 805.243 kb on + strand, within ABZR86_RS03680at 805.341 kb on - strand, within ABZR86_RS03680at 805.341 kb on - strand, within ABZR86_RS03680at 805.341 kb on - strand, within ABZR86_RS03680at 805.425 kb on + strandat 805.426 kb on - strandat 805.426 kb on - strandat 805.427 kb on + strandat 805.474 kb on + strandat 805.475 kb on - strandat 805.475 kb on - strandat 805.590 kb on + strandat 805.615 kb on - strandat 805.769 kb on + strand, within ABZR86_RS03685at 805.844 kb on + strand, within ABZR86_RS03685at 805.844 kb on + strand, within ABZR86_RS03685at 806.037 kb on + strandat 806.059 kb on + strandat 806.067 kb on - strandat 806.067 kb on - strandat 806.069 kb on + strandat 806.070 kb on - strandat 806.070 kb on - strandat 806.070 kb on - strandat 806.070 kb on - strandat 806.094 kb on + strandat 806.095 kb on - strandat 806.095 kb on - strandat 806.124 kb on + strandat 806.125 kb on - strandat 806.125 kb on - strandat 806.151 kb on + strandat 806.151 kb on + strandat 806.155 kb on + strandat 806.155 kb on + strandat 806.156 kb on - strandat 806.159 kb on + strandat 806.214 kb on - strandat 806.259 kb on - strandat 806.341 kb on + strandat 806.341 kb on + strandat 806.342 kb on - strandat 806.342 kb on - strandat 806.391 kb on + strandat 806.567 kb on + strand, within ABZR86_RS03690at 806.567 kb on + strand, within ABZR86_RS03690at 806.595 kb on + strand, within ABZR86_RS03690at 806.596 kb on - strand, within ABZR86_RS03690at 806.596 kb on - strand, within ABZR86_RS03690at 806.647 kb on + strand, within ABZR86_RS03690at 806.648 kb on - strand, within ABZR86_RS03690at 806.648 kb on - strand, within ABZR86_RS03690at 806.719 kb on + strand, within ABZR86_RS03690at 806.719 kb on + strand, within ABZR86_RS03690at 806.720 kb on - strand, within ABZR86_RS03690at 806.720 kb on - strand, within ABZR86_RS03690at 806.854 kb on + strand, within ABZR86_RS03690at 806.869 kb on + strand, within ABZR86_RS03690at 806.869 kb on + strand, within ABZR86_RS03690at 806.869 kb on + strand, within ABZR86_RS03690at 807.001 kb on + strand, within ABZR86_RS03690at 807.004 kb on + strand, within ABZR86_RS03690at 807.004 kb on + strand, within ABZR86_RS03690at 807.004 kb on + strand, within ABZR86_RS03690

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Per-strain Table

Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml
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804,715 - ABZR86_RS03680 0.44 +0.6
804,715 - ABZR86_RS03680 0.44 -0.0
804,732 + ABZR86_RS03680 0.45 -0.3
804,732 + ABZR86_RS03680 0.45 -0.6
804,732 + ABZR86_RS03680 0.45 +0.7
804,732 + ABZR86_RS03680 0.45 +2.3
804,733 - ABZR86_RS03680 0.45 +0.0
804,733 - ABZR86_RS03680 0.45 -0.3
804,733 - ABZR86_RS03680 0.45 -0.3
804,733 - ABZR86_RS03680 0.45 -0.9
804,733 - ABZR86_RS03680 0.45 +0.2
804,733 - ABZR86_RS03680 0.45 -0.1
804,738 + ABZR86_RS03680 0.45 -0.6
804,738 + ABZR86_RS03680 0.45 -0.4
804,738 + ABZR86_RS03680 0.45 -0.2
804,739 - ABZR86_RS03680 0.45 +0.1
804,739 - ABZR86_RS03680 0.45 +0.1
804,739 - ABZR86_RS03680 0.45 -0.8
804,806 + ABZR86_RS03680 0.50 +0.6
804,806 + ABZR86_RS03680 0.50 -0.2
804,829 + ABZR86_RS03680 0.51 +0.3
804,830 - ABZR86_RS03680 0.51 -0.3
804,830 - ABZR86_RS03680 0.51 -0.2
804,830 - ABZR86_RS03680 0.51 +0.3
804,918 + ABZR86_RS03680 0.57 +0.7
804,918 + ABZR86_RS03680 0.57 -0.1
805,077 + ABZR86_RS03680 0.67 -0.3
805,077 + ABZR86_RS03680 0.67 -0.1
805,077 + ABZR86_RS03680 0.67 -0.2
805,077 + ABZR86_RS03680 0.67 +0.7
805,077 + ABZR86_RS03680 0.67 -0.6
805,077 + ABZR86_RS03680 0.67 -0.2
805,077 + ABZR86_RS03680 0.67 +0.1
805,078 - ABZR86_RS03680 0.67 -0.4
805,078 - ABZR86_RS03680 0.67 -0.1
805,079 + ABZR86_RS03680 0.68 -0.3
805,080 - ABZR86_RS03680 0.68 -0.4
805,080 - ABZR86_RS03680 0.68 +0.4
805,080 - ABZR86_RS03680 0.68 +0.4
805,218 + ABZR86_RS03680 0.77 -0.2
805,219 - ABZR86_RS03680 0.77 +0.5
805,219 - ABZR86_RS03680 0.77 -0.4
805,219 - ABZR86_RS03680 0.77 +0.5
805,243 + ABZR86_RS03680 0.78 +0.4
805,341 - ABZR86_RS03680 0.85 +0.1
805,341 - ABZR86_RS03680 0.85 +0.1
805,341 - ABZR86_RS03680 0.85 +0.3
805,425 + +0.5
805,426 - -0.5
805,426 - -0.5
805,427 + +0.9
805,474 + +0.7
805,475 - +0.3
805,475 - +0.1
805,590 + +0.1
805,615 - -0.2
805,769 + ABZR86_RS03685 0.17 -0.7
805,844 + ABZR86_RS03685 0.39 -0.2
805,844 + ABZR86_RS03685 0.39 -0.7
806,037 + -0.1
806,059 + +0.5
806,067 - -0.3
806,067 - -0.0
806,069 + -0.1
806,070 - +0.4
806,070 - -0.1
806,070 - +0.3
806,070 - -0.8
806,094 + +0.1
806,095 - +0.5
806,095 - +0.2
806,124 + +0.1
806,125 - +0.2
806,125 - -0.5
806,151 + +0.4
806,151 + +0.1
806,155 + +0.3
806,155 + +0.9
806,156 - +0.0
806,159 + -0.3
806,214 - -0.6
806,259 - -0.6
806,341 + -0.7
806,341 + +0.5
806,342 - +0.4
806,342 - -0.7
806,391 + +0.2
806,567 + ABZR86_RS03690 0.11 -0.3
806,567 + ABZR86_RS03690 0.11 -0.9
806,595 + ABZR86_RS03690 0.13 -0.7
806,596 - ABZR86_RS03690 0.13 +0.2
806,596 - ABZR86_RS03690 0.13 +0.1
806,647 + ABZR86_RS03690 0.15 -0.5
806,648 - ABZR86_RS03690 0.15 +0.3
806,648 - ABZR86_RS03690 0.15 +0.5
806,719 + ABZR86_RS03690 0.19 -0.0
806,719 + ABZR86_RS03690 0.19 +0.1
806,720 - ABZR86_RS03690 0.19 +0.2
806,720 - ABZR86_RS03690 0.19 +0.7
806,854 + ABZR86_RS03690 0.26 +0.8
806,869 + ABZR86_RS03690 0.27 -0.1
806,869 + ABZR86_RS03690 0.27 +0.5
806,869 + ABZR86_RS03690 0.27 -0.5
807,001 + ABZR86_RS03690 0.34 +0.2
807,004 + ABZR86_RS03690 0.34 -0.1
807,004 + ABZR86_RS03690 0.34 +0.1
807,004 + ABZR86_RS03690 0.34 +0.6

Or see this region's nucleotide sequence