Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS01540 and ABZR86_RS01545 are separated by 216 nucleotides ABZR86_RS01545 and ABZR86_RS01550 are separated by 36 nucleotides ABZR86_RS01550 and ABZR86_RS01555 are separated by 221 nucleotides ABZR86_RS01555 and ABZR86_RS01560 overlap by 1 nucleotides
ABZR86_RS01540: ABZR86_RS01540 - MipA/OmpV family protein, at 335,696 to 336,451
_RS01540
ABZR86_RS01545: ABZR86_RS01545 - DNA-3-methyladenine glycosylase I, at 336,668 to 337,279
_RS01545
ABZR86_RS01550: ABZR86_RS01550 - helix-turn-helix domain-containing GNAT family N-acetyltransferase, at 337,316 to 338,257
_RS01550
ABZR86_RS01555: ABZR86_RS01555 - DUF2239 family protein, at 338,479 to 338,844
_RS01555
ABZR86_RS01560: ABZR86_RS01560 - GIY-YIG nuclease family protein, at 338,844 to 339,194
_RS01560
Position (kb) 337
338
339 Strain fitness (log2 ratio) -1
0
1 at 336.422 kb on + strand at 336.422 kb on + strand at 336.422 kb on + strand at 336.422 kb on + strand at 336.423 kb on - strand at 336.423 kb on - strand at 336.440 kb on + strand at 336.636 kb on + strand at 336.637 kb on - strand at 336.670 kb on - strand at 336.774 kb on + strand, within ABZR86_RS01545 at 336.774 kb on + strand, within ABZR86_RS01545 at 336.774 kb on + strand, within ABZR86_RS01545 at 336.774 kb on + strand, within ABZR86_RS01545 at 336.775 kb on - strand, within ABZR86_RS01545 at 336.775 kb on - strand, within ABZR86_RS01545 at 336.775 kb on - strand, within ABZR86_RS01545 at 336.775 kb on - strand, within ABZR86_RS01545 at 336.775 kb on - strand, within ABZR86_RS01545 at 336.894 kb on + strand, within ABZR86_RS01545 at 336.906 kb on + strand, within ABZR86_RS01545 at 336.907 kb on - strand, within ABZR86_RS01545 at 336.907 kb on - strand, within ABZR86_RS01545 at 336.907 kb on - strand, within ABZR86_RS01545 at 337.056 kb on + strand, within ABZR86_RS01545 at 337.203 kb on + strand, within ABZR86_RS01545 at 337.204 kb on - strand, within ABZR86_RS01545 at 337.204 kb on - strand, within ABZR86_RS01545 at 337.204 kb on - strand, within ABZR86_RS01545 at 337.341 kb on + strand at 337.341 kb on + strand at 337.341 kb on + strand at 337.342 kb on - strand at 337.342 kb on - strand at 337.342 kb on - strand at 337.342 kb on - strand at 337.342 kb on - strand at 337.414 kb on - strand, within ABZR86_RS01550 at 337.486 kb on - strand, within ABZR86_RS01550 at 337.737 kb on + strand, within ABZR86_RS01550 at 337.737 kb on + strand, within ABZR86_RS01550 at 337.738 kb on - strand, within ABZR86_RS01550 at 337.738 kb on - strand, within ABZR86_RS01550 at 337.740 kb on + strand, within ABZR86_RS01550 at 337.740 kb on + strand, within ABZR86_RS01550 at 337.741 kb on - strand, within ABZR86_RS01550 at 337.741 kb on - strand, within ABZR86_RS01550 at 337.857 kb on + strand, within ABZR86_RS01550 at 337.922 kb on + strand, within ABZR86_RS01550 at 337.922 kb on + strand, within ABZR86_RS01550 at 337.923 kb on - strand, within ABZR86_RS01550 at 338.166 kb on + strand at 338.166 kb on + strand at 338.166 kb on + strand at 338.167 kb on - strand at 338.167 kb on - strand at 338.167 kb on - strand at 338.167 kb on - strand at 338.167 kb on - strand at 338.167 kb on - strand at 338.677 kb on + strand, within ABZR86_RS01555 at 338.678 kb on - strand, within ABZR86_RS01555 at 338.910 kb on + strand, within ABZR86_RS01560 at 338.910 kb on + strand, within ABZR86_RS01560 at 338.910 kb on + strand, within ABZR86_RS01560 at 338.910 kb on + strand, within ABZR86_RS01560 at 338.910 kb on + strand, within ABZR86_RS01560 at 338.910 kb on + strand, within ABZR86_RS01560 at 338.910 kb on + strand, within ABZR86_RS01560 at 338.910 kb on + strand, within ABZR86_RS01560 at 338.910 kb on + strand, within ABZR86_RS01560 at 338.910 kb on + strand, within ABZR86_RS01560 at 338.910 kb on + strand, within ABZR86_RS01560 at 338.910 kb on + strand, within ABZR86_RS01560 at 338.911 kb on - strand, within ABZR86_RS01560 at 338.911 kb on - strand, within ABZR86_RS01560 at 338.911 kb on - strand, within ABZR86_RS01560 at 338.911 kb on - strand, within ABZR86_RS01560 at 338.911 kb on - strand, within ABZR86_RS01560 at 338.911 kb on - strand, within ABZR86_RS01560 at 338.911 kb on - strand, within ABZR86_RS01560 at 338.911 kb on - strand, within ABZR86_RS01560 at 338.911 kb on - strand, within ABZR86_RS01560 at 338.911 kb on - strand, within ABZR86_RS01560 at 339.118 kb on - strand, within ABZR86_RS01560 at 339.185 kb on + strand at 339.186 kb on + strand at 339.186 kb on + strand at 339.192 kb on + strand at 339.193 kb on - strand at 339.196 kb on + strand at 339.196 kb on + strand at 339.196 kb on + strand at 339.197 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 336,422 + -0.3 336,422 + -1.3 336,422 + -1.1 336,422 + +1.1 336,423 - +0.1 336,423 - -1.1 336,440 + +0.1 336,636 + +0.3 336,637 - -0.3 336,670 - -0.4 336,774 + ABZR86_RS01545 0.17 -0.3 336,774 + ABZR86_RS01545 0.17 +0.3 336,774 + ABZR86_RS01545 0.17 +0.6 336,774 + ABZR86_RS01545 0.17 +0.1 336,775 - ABZR86_RS01545 0.17 -0.5 336,775 - ABZR86_RS01545 0.17 -0.7 336,775 - ABZR86_RS01545 0.17 +0.0 336,775 - ABZR86_RS01545 0.17 +0.0 336,775 - ABZR86_RS01545 0.17 -0.3 336,894 + ABZR86_RS01545 0.37 +0.0 336,906 + ABZR86_RS01545 0.39 +0.0 336,907 - ABZR86_RS01545 0.39 +0.3 336,907 - ABZR86_RS01545 0.39 -0.1 336,907 - ABZR86_RS01545 0.39 +1.5 337,056 + ABZR86_RS01545 0.63 -0.0 337,203 + ABZR86_RS01545 0.87 -0.2 337,204 - ABZR86_RS01545 0.88 +0.5 337,204 - ABZR86_RS01545 0.88 -0.3 337,204 - ABZR86_RS01545 0.88 -0.3 337,341 + +0.3 337,341 + -0.5 337,341 + -0.9 337,342 - -1.4 337,342 - +0.2 337,342 - +1.1 337,342 - -0.0 337,342 - +0.1 337,414 - ABZR86_RS01550 0.10 -0.5 337,486 - ABZR86_RS01550 0.18 +0.5 337,737 + ABZR86_RS01550 0.45 -0.0 337,737 + ABZR86_RS01550 0.45 +0.8 337,738 - ABZR86_RS01550 0.45 +0.2 337,738 - ABZR86_RS01550 0.45 +0.2 337,740 + ABZR86_RS01550 0.45 +1.1 337,740 + ABZR86_RS01550 0.45 -0.7 337,741 - ABZR86_RS01550 0.45 +1.1 337,741 - ABZR86_RS01550 0.45 -0.4 337,857 + ABZR86_RS01550 0.57 +0.0 337,922 + ABZR86_RS01550 0.64 +0.2 337,922 + ABZR86_RS01550 0.64 +0.7 337,923 - ABZR86_RS01550 0.64 -0.9 338,166 + -0.4 338,166 + +0.3 338,166 + -0.6 338,167 - -0.1 338,167 - +0.6 338,167 - -0.5 338,167 - +0.2 338,167 - -0.4 338,167 - +0.1 338,677 + ABZR86_RS01555 0.54 -1.1 338,678 - ABZR86_RS01555 0.54 +0.1 338,910 + ABZR86_RS01560 0.19 +0.3 338,910 + ABZR86_RS01560 0.19 +0.8 338,910 + ABZR86_RS01560 0.19 +0.6 338,910 + ABZR86_RS01560 0.19 +0.8 338,910 + ABZR86_RS01560 0.19 -0.4 338,910 + ABZR86_RS01560 0.19 +0.0 338,910 + ABZR86_RS01560 0.19 -0.3 338,910 + ABZR86_RS01560 0.19 +0.5 338,910 + ABZR86_RS01560 0.19 -0.6 338,910 + ABZR86_RS01560 0.19 +0.8 338,910 + ABZR86_RS01560 0.19 +0.3 338,910 + ABZR86_RS01560 0.19 +0.3 338,911 - ABZR86_RS01560 0.19 -0.3 338,911 - ABZR86_RS01560 0.19 -0.1 338,911 - ABZR86_RS01560 0.19 -0.0 338,911 - ABZR86_RS01560 0.19 +0.5 338,911 - ABZR86_RS01560 0.19 -0.8 338,911 - ABZR86_RS01560 0.19 -0.4 338,911 - ABZR86_RS01560 0.19 -0.2 338,911 - ABZR86_RS01560 0.19 +1.2 338,911 - ABZR86_RS01560 0.19 +0.1 338,911 - ABZR86_RS01560 0.19 -1.2 339,118 - ABZR86_RS01560 0.78 -0.1 339,185 + -0.0 339,186 + +0.7 339,186 + +0.2 339,192 + -0.7 339,193 - -0.5 339,196 + -0.3 339,196 + -0.2 339,196 + +0.3 339,197 - +0.0
Or see this region's nucleotide sequence