Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_54

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
57,603	-				+0.7
57,603	-				-1.3
57,717	-				+0.0
57,717	-				-1.1
57,875	-		Pf1N1B4_52	0.41	-1.3
58,055	-		Pf1N1B4_52	0.80	+0.3
58,072	+		Pf1N1B4_52	0.84	-0.6
58,093	+		Pf1N1B4_52	0.89	+1.0
58,142	+				-0.1
58,182	+		Pf1N1B4_53	0.16	-1.1
58,186	+		Pf1N1B4_53	0.18	-0.1
58,202	+		Pf1N1B4_53	0.27	+0.0
58,202	+		Pf1N1B4_53	0.27	+1.7
58,206	+				+0.7
58,206	+		Pf1N1B4_53	0.29	-0.3
58,206	+		Pf1N1B4_53	0.29	+1.0
58,206	+		Pf1N1B4_53	0.29	-1.3
58,206	+		Pf1N1B4_53	0.29	-2.1
58,207	-		Pf1N1B4_53	0.29	-0.1
58,272	+		Pf1N1B4_53	0.63	+0.4
58,352	+				+1.5
58,388	+				-2.7
58,389	-				+1.5
58,389	-				+1.7
58,426	+				-2.2
58,427	-				+1.4
58,427	-				-1.3
58,548	-				+1.7
58,684	-		Pf1N1B4_54	0.19	-0.1
58,684	-		Pf1N1B4_54	0.19	+0.9
58,684	-		Pf1N1B4_54	0.19	+0.5
58,709	-		Pf1N1B4_54	0.22	+0.4
59,132	-				+2.3
59,145	+		Pf1N1B4_54	0.77	+0.7
59,181	+		Pf1N1B4_54	0.81	+1.7
59,182	-		Pf1N1B4_54	0.81	-0.8
59,189	-		Pf1N1B4_54	0.82	+2.1
59,203	+		Pf1N1B4_54	0.84	+0.2
59,203	+		Pf1N1B4_54	0.84	+1.0
59,239	+		Pf1N1B4_54	0.89	+0.0
59,239	+		Pf1N1B4_54	0.89	+0.8
59,239	+		Pf1N1B4_54	0.89	-0.1
59,239	+		Pf1N1B4_54	0.89	-0.7
59,239	+				+1.2
59,239	+		Pf1N1B4_54	0.89	-0.1
59,239	+		Pf1N1B4_54	0.89	-1.3
59,239	+		Pf1N1B4_54	0.89	-0.3
59,282	-				-2.1
59,282	-				+1.5
59,322	+				+0.9
59,322	+				-0.5
59,326	+				+0.7
59,326	+				-0.3
59,326	+				+2.7
59,350	+				+0.7
59,350	+				+0.7
59,504	+				-0.6
59,504	+				-0.8
59,504	+				-0.3
59,505	-				-0.6
59,505	-				+3.1
59,505	-				+1.7
59,505	-				-0.3
59,549	+				+0.2
59,550	-				-0.5
59,603	+		Pf1N1B4_55	0.11	+0.5
59,604	-		Pf1N1B4_55	0.12	-0.6
59,604	-		Pf1N1B4_55	0.12	-1.6
59,608	-		Pf1N1B4_55	0.13	+1.2
59,608	-		Pf1N1B4_55	0.13	-0.5
59,608	-		Pf1N1B4_55	0.13	+1.3
59,608	-		Pf1N1B4_55	0.13	+1.6
59,608	-		Pf1N1B4_55	0.13	+1.3
59,608	-		Pf1N1B4_55	0.13	-0.3
59,608	-		Pf1N1B4_55	0.13	+0.3
59,663	+		Pf1N1B4_55	0.30	+0.5
59,798	+				+1.1
59,799	-		Pf1N1B4_55	0.71	+1.2
59,799	-		Pf1N1B4_55	0.71	+0.1
59,799	-		Pf1N1B4_55	0.71	+0.9
59,811	+		Pf1N1B4_55	0.75	-0.4
59,812	-		Pf1N1B4_55	0.75	+1.3
59,851	-		Pf1N1B4_55	0.87	+0.2
59,851	-		Pf1N1B4_55	0.87	-1.1
59,895	+				-0.3
59,903	+				-0.6
59,904	-				+2.1
59,995	+				-0.5
60,096	+				+0.1
60,096	+				+0.4
60,096	+				+2.7
60,096	+				+0.4
60,097	-				-0.3
60,097	-				-0.1
60,097	-				-0.6
60,097	-				+0.9
60,097	-				+1.7
60,144	+				+0.2
60,145	-				+2.0
60,227	-				-1.8
60,241	+				+0.7
60,241	+				+0.8