Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4765
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
5,260,593 | - | -0.6 | |||
5,260,593 | - | Pf1N1B4_4764 | 0.27 | -0.6 | |
5,260,700 | + | Pf1N1B4_4764 | 0.36 | +0.2 | |
5,260,981 | - | Pf1N1B4_4764 | 0.57 | -1.5 | |
5,261,315 | + | -1.2 | |||
5,261,315 | + | +0.4 | |||
5,261,315 | + | Pf1N1B4_4764 | 0.83 | +1.0 | |
5,261,316 | - | Pf1N1B4_4764 | 0.83 | -2.3 | |
5,261,435 | + | -1.9 | |||
5,261,436 | - | -0.3 | |||
5,261,465 | + | -1.3 | |||
5,261,493 | - | +0.0 | |||
5,261,493 | - | +1.2 | |||
5,261,493 | - | +0.0 | |||
5,261,493 | - | +0.7 | |||
5,261,493 | - | +0.1 | |||
5,261,493 | - | +0.4 | |||
5,261,493 | - | -1.6 | |||
5,261,529 | + | +0.7 | |||
5,261,908 | - | Pf1N1B4_4765 | 0.31 | +0.3 | |
5,261,908 | - | Pf1N1B4_4765 | 0.31 | -1.9 | |
5,261,908 | - | Pf1N1B4_4765 | 0.31 | -0.6 | |
5,261,962 | - | Pf1N1B4_4765 | 0.36 | -0.6 | |
5,262,291 | + | +0.4 | |||
5,262,291 | + | Pf1N1B4_4765 | 0.69 | -2.4 | |
5,262,701 | - | Pf1N1B4_4766 | 0.13 | -0.9 | |
5,262,897 | - | Pf1N1B4_4766 | 0.38 | -0.6 | |
5,263,190 | - | +0.0 | |||
5,263,388 | + | +1.0 | |||
5,263,389 | + | -0.4 | |||
5,263,429 | + | +0.4 |
Or see this region's nucleotide sequence