Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4396
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
4,854,928 | + | +0.5 | |||
4,854,978 | - | +1.5 | |||
4,855,330 | + | Pf1N1B4_4395 | 0.49 | +0.9 | |
4,855,358 | - | Pf1N1B4_4395 | 0.52 | +0.2 | |
4,855,688 | + | Pf1N1B4_4395 | 0.88 | -1.9 | |
4,856,240 | + | Pf1N1B4_4396 | 0.41 | +0.3 | |
4,856,240 | + | Pf1N1B4_4396 | 0.41 | -1.1 | |
4,856,241 | - | Pf1N1B4_4396 | 0.42 | -0.3 | |
4,856,241 | - | Pf1N1B4_4396 | 0.42 | -0.5 | |
4,856,241 | - | Pf1N1B4_4396 | 0.42 | +0.5 | |
4,856,241 | - | Pf1N1B4_4396 | 0.42 | -0.9 | |
4,856,558 | + | -0.2 | |||
4,856,558 | + | Pf1N1B4_4396 | 0.83 | -0.8 | |
4,856,558 | + | Pf1N1B4_4396 | 0.83 | -1.8 | |
4,856,558 | + | Pf1N1B4_4396 | 0.83 | -1.5 | |
4,856,658 | - | +0.6 | |||
4,856,683 | + | -1.2 | |||
4,856,693 | + | +0.5 | |||
4,856,804 | - | +1.5 | |||
4,856,947 | + | +1.5 | |||
4,857,286 | + | Pf1N1B4_4397 | 0.52 | +0.2 | |
4,857,286 | + | Pf1N1B4_4397 | 0.52 | -1.4 | |
4,857,286 | + | Pf1N1B4_4397 | 0.52 | +0.2 | |
4,857,286 | + | Pf1N1B4_4397 | 0.52 | +1.0 | |
4,857,286 | + | Pf1N1B4_4397 | 0.52 | -0.1 | |
4,857,286 | + | +0.5 | |||
4,857,287 | - | Pf1N1B4_4397 | 0.52 | -1.5 | |
4,857,287 | - | Pf1N1B4_4397 | 0.52 | +1.2 | |
4,857,287 | - | -0.8 |
Or see this region's nucleotide sequence