Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3900

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,330,507	-		Pf1N1B4_3899	0.60	+0.6
4,330,618	-		Pf1N1B4_3899	0.66	-1.0
4,330,906	-		Pf1N1B4_3899	0.81	+0.0
4,331,041	+		Pf1N1B4_3899	0.88	-0.1
4,331,073	+		Pf1N1B4_3899	0.89	-0.1
4,331,073	+		Pf1N1B4_3899	0.89	-2.4
4,331,074	-		Pf1N1B4_3899	0.89	+1.5
4,331,074	-		Pf1N1B4_3899	0.89	-0.2
4,331,345	+				+1.2
4,331,357	+				-1.0
4,331,357	+				+1.1
4,331,357	+				-0.7
4,331,357	+				-0.5
4,331,357	+				-1.2
4,331,357	+				+0.2
4,331,357	+				+0.4
4,331,358	-				-0.6
4,331,358	-				-0.1
4,331,358	-				+1.4
4,331,358	-				+0.2
4,331,358	-				-0.6
4,331,358	-				+1.4
4,331,408	-				+0.1
4,331,520	+		Pf1N1B4_3900	0.12	+3.1
4,331,520	+		Pf1N1B4_3900	0.12	+2.1
4,331,521	-		Pf1N1B4_3900	0.12	-0.4
4,331,521	-				-0.2
4,331,642	-		Pf1N1B4_3900	0.39	+0.0
4,331,657	-		Pf1N1B4_3900	0.43	+1.5
4,331,792	+		Pf1N1B4_3900	0.74	+2.0
4,331,792	+		Pf1N1B4_3900	0.74	+1.0
4,331,793	-		Pf1N1B4_3900	0.74	-0.6
4,331,793	-		Pf1N1B4_3900	0.74	+0.4
4,331,793	-		Pf1N1B4_3900	0.74	+0.8
4,331,877	+				+1.4
4,331,900	-				+0.8
4,331,939	-				-0.7
4,331,939	-				-1.6
4,331,939	-				-0.6
4,331,942	+				-0.2
4,331,942	+				+0.8
4,331,942	+				-0.7
4,331,943	-				+1.8
4,331,943	-				+0.4
4,331,943	-				+0.5
4,331,943	-				-0.6
4,331,943	-				+0.5
4,331,943	-				+0.2
4,331,943	-				-2.2
4,332,004	+				+1.0
4,332,005	-				-2.2
4,332,010	+				+1.4
4,332,010	+				+2.4
4,332,011	-				+1.2
4,332,011	-				+0.8
4,332,011	-				+1.0
4,332,011	-				-1.6
4,332,011	-				-0.6
4,332,011	-				-1.2
4,332,082	+		Pf1N1B4_3901	0.16	+0.8
4,332,082	+		Pf1N1B4_3901	0.16	-2.0
4,332,082	+		Pf1N1B4_3901	0.16	-0.2
4,332,344	+		Pf1N1B4_3901	0.76	+0.0
4,332,344	+		Pf1N1B4_3901	0.76	+0.2
4,332,461	-				-0.8
4,332,507	+				-0.6
4,332,612	+				+1.3
4,332,613	-				+0.3
4,332,680	+				-0.8
4,332,734	+				-0.2
4,332,777	+				+0.7
4,332,781	+				+0.0
4,332,781	+				-0.6
4,332,782	-				-0.0
4,332,782	-				+0.6
4,332,782	-				+1.0
4,332,790	+				+0.8
4,332,790	+				+1.4
4,332,790	+				-1.8