Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3531

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,936,509	+				+0.2
3,936,509	+				-0.7
3,936,510	-				-0.1
3,936,510	-				-1.2
3,936,510	-				-1.1
3,936,510	-				-1.1
3,936,644	+		Pf1N1B4_3530	0.18	-0.1
3,936,644	+		Pf1N1B4_3530	0.18	-0.1
3,936,668	+		Pf1N1B4_3530	0.21	+0.2
3,936,668	+		Pf1N1B4_3530	0.21	+1.6
3,936,758	+		Pf1N1B4_3530	0.35	-1.1
3,936,758	+		Pf1N1B4_3530	0.35	-0.4
3,936,758	+		Pf1N1B4_3530	0.35	+0.5
3,936,759	-		Pf1N1B4_3530	0.36	-1.1
3,936,759	-		Pf1N1B4_3530	0.36	-0.3
3,936,806	+				-1.1
3,936,806	+		Pf1N1B4_3530	0.43	-0.7
3,936,807	-		Pf1N1B4_3530	0.43	+0.6
3,936,807	-		Pf1N1B4_3530	0.43	-0.8
3,936,857	+		Pf1N1B4_3530	0.51	-1.7
3,936,858	-		Pf1N1B4_3530	0.51	+0.3
3,937,088	+		Pf1N1B4_3530	0.87	+1.3
3,937,272	+				-0.1
3,937,333	+				-0.7
3,937,333	+				+0.4
3,937,334	-				+0.5
3,937,334	-				-0.7
3,937,384	+				+0.5
3,937,539	+				+0.7
3,937,541	+				+0.8
3,937,541	+				-0.3
3,937,541	+				-1.1
3,937,542	-				-2.6
3,937,604	+		Pf1N1B4_3531	0.27	+0.6
3,937,605	-		Pf1N1B4_3531	0.27	+0.5
3,937,646	+		Pf1N1B4_3531	0.38	-2.3
3,937,686	-		Pf1N1B4_3531	0.49	-0.7
3,937,733	+		Pf1N1B4_3531	0.62	-1.1
3,937,733	+		Pf1N1B4_3531	0.62	-1.4
3,937,888	+				-0.8
3,937,889	-				+0.3
3,938,000	+		Pf1N1B4_3532	0.15	-0.4
3,938,424	+		Pf1N1B4_3532	0.87	-1.7
3,938,524	-				-0.9
3,938,524	-				-0.1
3,938,524	-				-0.6
3,938,524	-				+1.4
3,938,524	-				+0.3
3,938,524	-				-1.4
3,938,524	-				-1.1
3,938,524	-				-0.5
3,938,524	-				+1.9
3,938,575	+				-0.3
3,938,575	+				-0.7
3,938,576	-				+1.5
3,938,576	-				-0.2
3,938,665	+				-0.3
3,938,665	+				+0.4
3,938,742	+				-1.1
3,938,742	+				-1.0
3,938,742	+				-0.2
3,938,743	-				-0.7
3,938,778	+				+0.3
3,938,778	+				+0.2
3,938,778	+				-0.3
3,938,778	+				-0.1
3,938,779	-				+0.3
3,938,821	+				+1.9
3,938,821	+				-1.1
3,938,821	+				+1.9
3,938,821	+				-1.3
3,938,821	+				-0.1
3,938,821	+				-0.4
3,938,822	-				+0.4
3,938,822	-				+1.5
3,938,822	-				-0.4
3,938,822	-				+0.9
3,938,822	-				-0.2
3,938,846	+				+0.7
3,938,846	+				+0.3
3,938,846	+				+1.3
3,938,847	-				-1.3