Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3426

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,815,839	+		Pf1N1B4_3425	0.37	+0.2
3,815,929	-		Pf1N1B4_3425	0.42	-0.9
3,815,946	+		Pf1N1B4_3425	0.44	-1.4
3,816,083	+		Pf1N1B4_3425	0.52	+0.2
3,816,084	-		Pf1N1B4_3425	0.52	+0.9
3,816,129	+		Pf1N1B4_3425	0.55	+0.0
3,816,130	-		Pf1N1B4_3425	0.55	+1.5
3,816,234	+		Pf1N1B4_3425	0.62	+0.3
3,816,588	+		Pf1N1B4_3425	0.85	-0.3
3,817,012	+		Pf1N1B4_3426	0.15	+0.5
3,817,271	+		Pf1N1B4_3426	0.34	+0.6
3,817,292	+				-0.1
3,817,292	+				-0.6
3,817,293	-		Pf1N1B4_3426	0.36	+2.9
3,817,372	+				+1.9
3,817,372	+		Pf1N1B4_3426	0.42	+0.7
3,817,373	-		Pf1N1B4_3426	0.42	+0.4
3,817,449	+		Pf1N1B4_3426	0.48	-0.1
3,817,449	+		Pf1N1B4_3426	0.48	-0.2
3,817,449	+		Pf1N1B4_3426	0.48	+1.9
3,817,558	+		Pf1N1B4_3426	0.56	+1.4
3,817,558	+		Pf1N1B4_3426	0.56	+0.2
3,817,558	+				+0.9
3,817,558	+		Pf1N1B4_3426	0.56	+0.5
3,817,559	-		Pf1N1B4_3426	0.57	-0.1
3,817,559	-		Pf1N1B4_3426	0.57	-1.4
3,817,676	-		Pf1N1B4_3426	0.66	+0.1
3,817,679	+		Pf1N1B4_3426	0.66	+0.8
3,817,679	+		Pf1N1B4_3426	0.66	+0.9
3,817,679	+		Pf1N1B4_3426	0.66	+1.2
3,817,680	-				-0.6
3,817,744	+		Pf1N1B4_3426	0.71	+1.4
3,817,745	-		Pf1N1B4_3426	0.71	+1.7
3,817,812	+		Pf1N1B4_3426	0.76	-1.6
3,817,812	+				-0.4
3,817,873	+		Pf1N1B4_3426	0.81	+0.5
3,817,873	+		Pf1N1B4_3426	0.81	-0.5
3,817,924	+		Pf1N1B4_3426	0.85	+1.4
3,817,957	+		Pf1N1B4_3426	0.87	+0.2
3,817,994	+				+1.2
3,818,183	+				+1.2
3,818,184	-				+0.3
3,818,299	+				-0.3
3,818,299	+				+0.0
3,818,299	+				-0.8
3,818,299	+				-1.6
3,818,299	+				-0.6
3,818,300	-				-0.6
3,818,300	-				-0.1
3,818,300	-				+1.2
3,818,380	+				+0.2
3,818,380	+				+0.2
3,818,380	+				-0.6
3,818,381	-				-0.3
3,818,381	-				-0.5
3,818,381	-				+0.2
3,818,381	-				-0.8
3,818,381	-				+1.7
3,818,429	+				+0.2
3,818,429	+				-0.4
3,818,450	+				-1.1
3,818,450	+				-0.4
3,818,451	-				+0.5
3,818,451	-				+0.6
3,818,451	-				+0.2
3,818,451	-				+0.5
3,818,503	+				+1.5
3,818,503	+				+0.4
3,818,503	+				+1.5
3,818,503	+				-0.6
3,818,503	+				-1.5
3,818,503	+				+0.4
3,818,504	-				+0.5
3,818,504	-				+1.6
3,818,504	-				-0.6
3,818,504	-				-0.1
3,818,561	+				+1.6
3,818,561	+				-1.1
3,818,562	-				+0.4
3,818,562	-				-0.5
3,818,562	-				+1.7
3,818,562	-				-1.4
3,818,581	+				+0.4
3,818,581	+				-1.7
3,818,582	-				-0.1
3,818,621	-				-0.6
3,818,653	+				+0.4
3,818,653	+				-0.1
3,818,654	-				-1.4
3,818,727	+				-0.1
3,818,727	+				+0.4
3,818,727	+				+0.4
3,818,727	+				+0.5
3,818,728	-				+1.5
3,818,728	-				+0.2
3,818,728	-				+0.2
3,818,728	-				+0.9
3,818,728	-				-0.6
3,818,741	+				+0.2
3,818,741	+				+0.6
3,818,745	+				+1.3
3,818,745	+				-1.1
3,818,745	+				+0.9
3,818,745	+				-0.1
3,818,745	+				+1.4
3,818,745	+				-1.1
3,818,746	-				-0.6
3,818,746	-				-1.1
3,818,749	-				+0.8
3,818,773	+				+1.0
3,818,773	+				-0.3
3,818,774	-				-0.1
3,818,774	-				-0.1
3,818,774	-				-0.5
3,818,774	-				+0.9
3,818,774	-				+0.7
3,818,774	-				+1.7
3,818,785	-				-1.1
3,818,814	+				-1.4
3,818,814	+				-1.9
3,818,814	+				+0.9
3,818,814	+				+1.7
3,818,815	-				-0.4
3,818,815	-				+0.9
3,818,815	-				+1.5
3,818,815	-				+0.4
3,818,815	-				+0.1
3,818,872	+				-0.6
3,818,888	+				+2.5
3,818,909	-				-0.6
3,818,909	-				-0.1
3,818,909	-				+1.3
3,818,909	-				+0.3
3,818,909	-				-1.1
3,818,947	+				+0.6
3,818,965	+				-0.8
3,818,995	+				-1.1
3,818,995	+				+0.4
3,819,095	+				-1.1