Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3354

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,739,601	+				-1.0
3,739,601	+				-0.0
3,739,601	+				+1.4
3,739,601	+				+0.4
3,739,601	+				-1.6
3,739,601	+				+0.2
3,739,601	+				-2.4
3,739,601	+				+1.3
3,739,601	+				-0.4
3,739,601	+				+1.3
3,739,601	+				+0.2
3,739,601	+				-1.4
3,739,601	+				+0.4
3,739,602	-				+2.3
3,739,602	-				-0.5
3,739,602	-				+1.0
3,739,602	-				-2.2
3,739,602	-				+0.6
3,739,602	-				+1.2
3,739,602	-				-0.2
3,739,602	-				-0.3
3,739,620	-				+0.7
3,739,668	+				+0.6
3,739,669	-				+1.2
3,739,671	-				+0.4
3,739,671	-				-0.9
3,739,867	+				+0.4
3,739,868	-				+1.0
3,739,937	+		Pf1N1B4_3353	0.19	-0.2
3,739,937	+		Pf1N1B4_3353	0.19	+0.5
3,739,960	+		Pf1N1B4_3353	0.25	-0.3
3,739,960	+		Pf1N1B4_3353	0.25	-0.0
3,739,960	+		Pf1N1B4_3353	0.25	+1.0
3,739,960	+		Pf1N1B4_3353	0.25	-0.1
3,739,961	-		Pf1N1B4_3353	0.26	-0.8
3,739,974	-		Pf1N1B4_3353	0.29	+0.7
3,740,003	-		Pf1N1B4_3353	0.37	+0.4
3,740,003	-				-0.0
3,740,003	-		Pf1N1B4_3353	0.37	+1.0
3,740,134	+		Pf1N1B4_3353	0.72	+0.1
3,740,135	-				+1.5
3,740,251	+				+1.5
3,740,251	+				-0.4
3,740,252	-				-0.2
3,740,260	+				+0.1
3,740,261	-				-0.9
3,740,270	+				-0.1
3,740,271	-				-0.0
3,740,271	-				-0.6
3,740,271	-				+1.2
3,740,271	-				-0.4
3,740,284	-				+0.4
3,740,300	+				+0.4
3,740,300	+				-1.5
3,740,300	+				-1.8
3,740,300	+				+1.1
3,740,300	+				+1.2
3,740,301	-				+0.7
3,740,301	-				-0.8
3,740,301	-				-0.1
3,740,301	-				-0.6
3,740,301	-				+2.3
3,740,301	-				-1.0
3,740,301	-				+0.7
3,740,301	-				+0.9
3,740,304	+				+0.2
3,740,304	+				-0.0
3,740,304	+				+0.5
3,740,304	+				-1.4
3,740,304	+				-0.5
3,740,304	+				+0.2
3,740,304	+				-1.0
3,740,304	+				+1.0
3,740,305	-				-0.6
3,740,305	-				-0.0
3,740,305	-				+1.5
3,740,305	-				+2.0
3,740,305	-				+1.4
3,740,305	-				+0.5
3,740,305	-				-0.6
3,740,305	-				+1.4
3,740,308	-				-0.3
3,740,446	+				-0.4
3,740,446	+				+2.0
3,740,446	+				+0.5
3,740,446	+				-0.0
3,740,447	-				+2.0
3,740,447	-				+1.3
3,740,447	-				-0.0
3,740,447	-				+0.5
3,740,447	-				-0.4
3,740,447	-				+0.3
3,740,450	+				-0.2
3,740,450	+				-0.0
3,740,450	+				-1.0
3,740,450	+				-0.6
3,740,450	+				+1.0
3,740,451	-				-0.5
3,740,451	-				+1.2
3,740,451	-				+1.0
3,740,451	-				+0.3
3,740,451	-				-2.0
3,740,451	-				+1.4
3,740,451	-				-0.5
3,740,451	-				+0.4
3,740,451	-				+1.0
3,740,671	-		Pf1N1B4_3354	0.29	+1.1
3,740,671	-				+0.4
3,740,783	-		Pf1N1B4_3354	0.45	+0.8
3,740,783	-		Pf1N1B4_3354	0.45	+0.0
3,741,088	-		Pf1N1B4_3354	0.90	+0.4
3,741,184	+				+1.0
3,741,184	+				-0.2
3,741,185	-				+0.6
3,741,185	-				+1.4
3,741,998	-		Pf1N1B4_3356	0.87	-0.0
3,741,998	-		Pf1N1B4_3356	0.87	+0.2