Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3130

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,514,638	+		Pf1N1B4_3128	0.69	+0.4
3,514,638	+		Pf1N1B4_3128	0.69	+0.0
3,514,639	-		Pf1N1B4_3128	0.69	-0.1
3,514,639	-		Pf1N1B4_3128	0.69	+1.0
3,514,639	-		Pf1N1B4_3128	0.69	+1.8
3,514,639	-		Pf1N1B4_3128	0.69	-2.0
3,514,639	-		Pf1N1B4_3128	0.69	+1.7
3,514,755	+		Pf1N1B4_3128	0.80	+0.2
3,514,755	+		Pf1N1B4_3128	0.80	-0.6
3,514,755	+		Pf1N1B4_3128	0.80	+0.3
3,514,756	-		Pf1N1B4_3128	0.80	+0.5
3,514,756	-		Pf1N1B4_3128	0.80	-0.6
3,514,756	-		Pf1N1B4_3128	0.80	+0.4
3,514,872	+				+0.5
3,514,872	+				+0.4
3,514,873	-				-0.6
3,514,873	-				+0.2
3,514,873	-				-1.0
3,514,926	-				+0.9
3,515,030	+				-1.0
3,515,030	+				-1.6
3,515,030	+				+1.4
3,515,031	-				-0.6
3,515,038	-				-1.0
3,515,107	+				+1.6
3,515,108	-				-0.8
3,515,371	-		Pf1N1B4_3129	0.53	-0.3
3,515,371	-		Pf1N1B4_3129	0.53	+1.0
3,515,371	-				+1.0
3,515,543	-		Pf1N1B4_3129	0.87	-2.4
3,515,743	+		Pf1N1B4_3130	0.34	-0.5
3,515,831	+		Pf1N1B4_3130	0.56	-2.6
3,515,831	+		Pf1N1B4_3130	0.56	-0.7
3,515,832	-		Pf1N1B4_3130	0.56	-1.0
3,515,996	+				-0.3
3,515,996	+				+1.0
3,515,997	-				+0.6
3,515,997	-				-0.4
3,515,997	-				-1.7
3,515,997	-				+1.0
3,515,997	-				+2.0
3,515,997	-				-2.6
3,515,997	-				-0.4
3,515,997	-				+0.5
3,516,324	+		Pf1N1B4_3131	0.31	-0.3
3,516,324	+		Pf1N1B4_3131	0.31	+3.0
3,516,324	+		Pf1N1B4_3131	0.31	-1.1
3,516,325	-		Pf1N1B4_3131	0.31	+0.3
3,516,325	-		Pf1N1B4_3131	0.31	+2.0
3,516,465	-		Pf1N1B4_3131	0.45	+1.6
3,516,465	-		Pf1N1B4_3131	0.45	-0.5
3,516,585	+		Pf1N1B4_3131	0.56	+0.6
3,516,585	+		Pf1N1B4_3131	0.56	+0.0
3,516,586	-		Pf1N1B4_3131	0.56	-0.1
3,516,617	-		Pf1N1B4_3131	0.59	+2.0
3,516,669	+		Pf1N1B4_3131	0.64	+1.0
3,516,669	+				+1.6
3,516,669	+		Pf1N1B4_3131	0.64	-0.7
3,516,669	+		Pf1N1B4_3131	0.64	+0.2
3,516,669	+		Pf1N1B4_3131	0.64	+0.8
3,516,670	-		Pf1N1B4_3131	0.64	-0.4
3,516,670	-		Pf1N1B4_3131	0.64	-0.1
3,516,670	-		Pf1N1B4_3131	0.64	-2.0
3,516,670	-		Pf1N1B4_3131	0.64	+0.3
3,516,670	-		Pf1N1B4_3131	0.64	+0.3
3,516,735	+				+0.0
3,516,735	+		Pf1N1B4_3131	0.71	-0.3
3,516,735	+		Pf1N1B4_3131	0.71	+0.0
3,516,736	-		Pf1N1B4_3131	0.71	-1.6
3,516,736	-		Pf1N1B4_3131	0.71	+0.9
3,516,736	-		Pf1N1B4_3131	0.71	+1.2
3,516,736	-		Pf1N1B4_3131	0.71	+0.3
3,516,769	+		Pf1N1B4_3131	0.74	+0.0
3,516,769	+		Pf1N1B4_3131	0.74	-1.2
3,516,769	+		Pf1N1B4_3131	0.74	-0.3
3,516,769	+		Pf1N1B4_3131	0.74	+0.0
3,516,769	+				+0.0
3,516,770	-		Pf1N1B4_3131	0.74	+0.4
3,516,770	-		Pf1N1B4_3131	0.74	+0.9
3,516,770	-		Pf1N1B4_3131	0.74	+0.7
3,516,770	-		Pf1N1B4_3131	0.74	-0.2
3,516,804	+		Pf1N1B4_3131	0.77	+1.0
3,516,805	-		Pf1N1B4_3131	0.77	+0.0
3,516,805	-		Pf1N1B4_3131	0.77	-1.1
3,516,838	+		Pf1N1B4_3131	0.81	-0.3