Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2857

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,203,291	-		Pf1N1B4_2856	0.39	-0.4
3,203,303	-		Pf1N1B4_2856	0.40	-0.1
3,203,605	-		Pf1N1B4_2856	0.62	+0.2
3,203,605	-		Pf1N1B4_2856	0.62	-0.4
3,203,648	-		Pf1N1B4_2856	0.65	-0.6
3,203,648	-		Pf1N1B4_2856	0.65	-0.8
3,203,651	-		Pf1N1B4_2856	0.65	-0.4
3,203,651	-		Pf1N1B4_2856	0.65	-1.0
3,203,705	-		Pf1N1B4_2856	0.69	+1.2
3,203,971	-		Pf1N1B4_2856	0.88	-1.0
3,203,971	-		Pf1N1B4_2856	0.88	-0.1
3,204,209	+				+2.2
3,204,209	+				+0.4
3,204,216	+				-0.8
3,204,216	+				-0.1
3,204,216	+				-0.8
3,204,232	+				-0.4
3,204,233	-				+1.2
3,204,233	-				-1.4
3,204,246	+				+0.2
3,204,246	+				-0.3
3,204,246	+				-0.8
3,204,247	-				-1.4
3,204,247	-				-1.4
3,204,247	-				-2.1
3,204,267	+				-1.4
3,204,267	+				-0.4
3,204,267	+				+1.8
3,204,267	+				-1.1
3,204,267	+				+1.6
3,204,268	-				+0.5
3,204,268	-				+1.8
3,204,349	-		Pf1N1B4_2857	0.51	-1.6
3,204,349	-		Pf1N1B4_2857	0.51	+0.0
3,204,349	-		Pf1N1B4_2857	0.51	+0.0
3,204,362	-		Pf1N1B4_2857	0.59	+1.5
3,204,362	-		Pf1N1B4_2857	0.59	+0.6
3,204,362	-		Pf1N1B4_2857	0.59	+1.2
3,204,362	-		Pf1N1B4_2857	0.59	+0.4
3,204,362	-		Pf1N1B4_2857	0.59	+1.2
3,204,367	+		Pf1N1B4_2857	0.62	+1.0
3,204,368	-		Pf1N1B4_2857	0.63	-0.1
3,204,368	-		Pf1N1B4_2857	0.63	-1.3
3,204,531	+				+0.4
3,204,532	-				-0.5
3,204,534	+				-0.8
3,204,593	+				+0.2
3,204,593	+				-0.7
3,204,594	-				-0.6
3,204,594	-				+0.4
3,204,597	+				+0.0
3,204,620	+				+0.2
3,204,621	-				-0.8
3,204,621	-				+0.2
3,204,644	+				+2.8
3,204,650	+				-0.1
3,204,650	+				-1.1
3,204,651	-				+1.2
3,204,660	+				+0.4
3,204,660	+				-0.7
3,204,660	+				-2.4
3,204,660	+				+0.6
3,204,660	+				+0.2
3,204,661	-				+1.0
3,204,661	-				+0.4
3,204,661	-				-1.5
3,204,672	+				+0.2
3,204,684	-				+0.6
3,204,684	-				+1.0
3,204,692	+				+0.4
3,204,693	-				-0.1
3,204,693	-				+0.9
3,204,695	-				+2.8
3,204,729	-				+0.2
3,204,762	+				-0.4
3,204,796	-				+0.7
3,204,830	+				+0.3
3,204,830	+				-1.1
3,204,830	+				-1.8
3,204,831	-				+0.3
3,204,831	-				-0.7
3,204,867	+				-0.6
3,204,867	+				-0.1
3,204,868	-				+1.0
3,204,868	-				+0.2
3,204,868	-				-0.1
3,205,030	+		Pf1N1B4_2858	0.10	-1.3
3,205,030	+		Pf1N1B4_2858	0.10	+1.6
3,205,030	+		Pf1N1B4_2858	0.10	+1.2
3,205,030	+		Pf1N1B4_2858	0.10	+0.5
3,205,031	-		Pf1N1B4_2858	0.10	-0.5
3,205,031	-		Pf1N1B4_2858	0.10	+0.2
3,205,031	-		Pf1N1B4_2858	0.10	-0.6
3,205,031	-		Pf1N1B4_2858	0.10	+1.2
3,205,031	-		Pf1N1B4_2858	0.10	+0.3
3,205,031	-		Pf1N1B4_2858	0.10	+1.2
3,205,243	+		Pf1N1B4_2858	0.25	-1.1
3,205,243	+		Pf1N1B4_2858	0.25	-0.4
3,205,244	-		Pf1N1B4_2858	0.25	-0.4
3,205,244	-		Pf1N1B4_2858	0.25	-2.1
3,205,244	-		Pf1N1B4_2858	0.25	-0.2
3,205,386	+		Pf1N1B4_2858	0.35	-1.8
3,205,386	+		Pf1N1B4_2858	0.35	-1.1
3,205,387	-		Pf1N1B4_2858	0.35	+0.4
3,205,387	-		Pf1N1B4_2858	0.35	+0.5
3,205,402	+		Pf1N1B4_2858	0.36	-2.0
3,205,402	+		Pf1N1B4_2858	0.36	+0.6
3,205,402	+		Pf1N1B4_2858	0.36	+0.2
3,205,402	+		Pf1N1B4_2858	0.36	+0.7
3,205,402	+		Pf1N1B4_2858	0.36	+1.8
3,205,402	+		Pf1N1B4_2858	0.36	-1.4
3,205,402	+		Pf1N1B4_2858	0.36	+1.8
3,205,402	+		Pf1N1B4_2858	0.36	+1.0
3,205,402	+		Pf1N1B4_2858	0.36	+0.5
3,205,402	+		Pf1N1B4_2858	0.36	-0.5
3,205,402	+		Pf1N1B4_2858	0.36	-0.7
3,205,402	+		Pf1N1B4_2858	0.36	+0.5
3,205,402	+		Pf1N1B4_2858	0.36	+1.0
3,205,403	-		Pf1N1B4_2858	0.36	+0.4
3,205,403	-		Pf1N1B4_2858	0.36	-0.1
3,205,403	-		Pf1N1B4_2858	0.36	-2.0
3,205,403	-		Pf1N1B4_2858	0.36	-0.8
3,205,403	-		Pf1N1B4_2858	0.36	+0.5
3,205,403	-		Pf1N1B4_2858	0.36	+1.2
3,205,403	-		Pf1N1B4_2858	0.36	+0.0
3,205,403	-		Pf1N1B4_2858	0.36	-0.8
3,205,403	-		Pf1N1B4_2858	0.36	-0.4
3,205,403	-		Pf1N1B4_2858	0.36	+1.2
3,205,403	-		Pf1N1B4_2858	0.36	-0.4
3,205,403	-		Pf1N1B4_2858	0.36	+2.2
3,205,403	-		Pf1N1B4_2858	0.36	+0.4