Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2712

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,048,838	-		Pf1N1B4_2711	0.34	-0.2
3,048,838	-		Pf1N1B4_2711	0.34	-1.3
3,048,889	-		Pf1N1B4_2711	0.39	-1.1
3,049,072	-		Pf1N1B4_2711	0.57	-0.1
3,049,072	-		Pf1N1B4_2711	0.57	-0.8
3,049,072	-		Pf1N1B4_2711	0.57	+0.2
3,049,138	-				-0.8
3,049,533	-				-0.3
3,049,579	-				+0.4
3,049,580	+				+0.0
3,049,660	+				-1.1
3,049,660	+				+0.4
3,050,048	-		Pf1N1B4_2712	0.24	+0.2
3,050,048	-		Pf1N1B4_2712	0.24	+1.5
3,050,192	-		Pf1N1B4_2712	0.34	+1.2
3,050,543	+		Pf1N1B4_2712	0.60	-1.2
3,050,545	+				+2.2
3,050,545	+		Pf1N1B4_2712	0.60	+0.6
3,050,545	+		Pf1N1B4_2712	0.60	+1.5
3,050,545	+		Pf1N1B4_2712	0.60	+2.6
3,050,569	+		Pf1N1B4_2712	0.62	-0.5
3,050,569	+		Pf1N1B4_2712	0.62	+1.2
3,050,599	+		Pf1N1B4_2712	0.64	+0.2
3,050,600	-				-0.3
3,050,600	-		Pf1N1B4_2712	0.64	-0.3
3,050,600	-		Pf1N1B4_2712	0.64	-0.8
3,050,600	-		Pf1N1B4_2712	0.64	+0.5
3,050,687	+		Pf1N1B4_2712	0.70	-0.8
3,050,742	+		Pf1N1B4_2712	0.74	+2.8
3,050,998	+				+0.2
3,051,031	+				+1.2
3,051,031	+				-1.1
3,051,031	+				+0.2
3,051,051	+				-0.7
3,051,084	+				-0.6
3,051,084	+				-0.3
3,051,085	-				-0.1
3,051,086	+				+0.2
3,051,087	-				+0.2
3,051,109	+				+0.6
3,051,135	+				-1.4
3,051,135	+				-0.6
3,051,135	+				+0.1
3,051,136	-				+0.8
3,051,136	-				-0.2
3,051,136	-				-1.1
3,051,136	-				+0.8
3,051,136	-				-0.1
3,051,136	-				+0.7
3,051,136	-				-0.3
3,051,136	-				+0.2
3,051,137	+				-0.5
3,051,137	+				-0.1
3,051,138	-				-0.8
3,051,138	-				+0.2
3,051,138	-				-0.8
3,051,138	-				-1.6
3,051,138	-				-0.9
3,051,138	-				-1.1
3,051,138	-				-0.8
3,051,138	-				-1.6
3,051,138	-				+0.1
3,051,206	+				+0.7
3,051,206	+				+1.2
3,051,206	+				+1.9
3,051,206	+				+0.5
3,051,206	+				-0.1
3,051,206	+				+1.2
3,051,207	-				-0.3
3,051,207	-				+2.0
3,051,207	-				-0.6
3,051,207	-				+0.7
3,051,207	-				-0.3
3,051,207	-				+1.6
3,051,207	-				-0.1
3,051,207	-				-0.3
3,051,207	-				-0.8
3,051,207	-				+0.2
3,051,239	+		Pf1N1B4_2713	0.17	-1.1
3,051,240	-		Pf1N1B4_2713	0.18	-0.1
3,051,249	-				+2.2
3,051,249	-		Pf1N1B4_2713	0.20	+1.2
3,051,249	-		Pf1N1B4_2713	0.20	+1.4
3,051,263	+		Pf1N1B4_2713	0.25	+0.2
3,051,264	-		Pf1N1B4_2713	0.25	-0.9
3,051,264	-		Pf1N1B4_2713	0.25	+0.6
3,051,565	+				+1.2
3,051,566	-				-2.2
3,051,566	-				+1.2
3,051,566	-				-0.0
3,051,566	-				+0.0
3,051,706	+				-0.0
3,051,706	+				+0.5
3,051,706	+				+0.5
3,051,706	+				+0.0
3,051,706	+				+0.2
3,051,706	+				+0.2
3,051,707	-		Pf1N1B4_2714	0.10	+0.9
3,051,707	-		Pf1N1B4_2714	0.10	+1.2
3,051,707	-		Pf1N1B4_2714	0.10	+1.5
3,051,707	-		Pf1N1B4_2714	0.10	-0.3
3,051,707	-		Pf1N1B4_2714	0.10	+0.4
3,051,707	-		Pf1N1B4_2714	0.10	-0.9
3,051,707	-		Pf1N1B4_2714	0.10	+0.1
3,051,707	-		Pf1N1B4_2714	0.10	+0.2
3,051,707	-		Pf1N1B4_2714	0.10	+1.1
3,051,711	-		Pf1N1B4_2714	0.11	+1.2