Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2646

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,983,912	-				+1.8
2,983,948	-				-0.2
2,983,961	-				-1.5
2,983,961	-				-1.1
2,983,961	-				-0.7
2,983,961	-				+2.0
2,983,970	+				+0.5
2,983,971	-				+0.0
2,983,971	-				-0.7
2,983,971	-				+1.0
2,983,971	-				-0.6
2,984,000	+				+0.8
2,984,000	+				+1.6
2,984,000	+				+1.3
2,984,000	+				+1.0
2,984,000	+				-0.1
2,984,000	+				+0.7
2,984,000	+				+0.1
2,984,001	-				+2.6
2,984,001	-				-0.7
2,984,001	-				+0.0
2,984,003	+				-1.4
2,984,003	+				-0.7
2,984,003	+				+0.3
2,984,003	+				+0.3
2,984,004	-				-0.5
2,984,004	-				+0.9
2,984,030	+				+0.5
2,984,030	+				-0.0
2,984,108	+		Pf1N1B4_2645	0.12	+1.3
2,984,108	+		Pf1N1B4_2645	0.12	-0.9
2,984,109	-		Pf1N1B4_2645	0.13	-0.3
2,984,109	-		Pf1N1B4_2645	0.13	+0.5
2,984,159	+		Pf1N1B4_2645	0.18	+0.5
2,984,159	+		Pf1N1B4_2645	0.18	+0.2
2,984,196	-		Pf1N1B4_2645	0.23	-0.1
2,984,393	+		Pf1N1B4_2645	0.45	+0.3
2,984,437	+		Pf1N1B4_2645	0.50	-0.1
2,984,437	+		Pf1N1B4_2645	0.50	-1.9
2,984,437	+		Pf1N1B4_2645	0.50	-0.1
2,984,438	-		Pf1N1B4_2645	0.50	-0.9
2,984,438	-		Pf1N1B4_2645	0.50	-2.1
2,984,438	-		Pf1N1B4_2645	0.50	-2.2
2,984,438	-		Pf1N1B4_2645	0.50	-2.7
2,984,708	+		Pf1N1B4_2645	0.81	-1.3
2,984,709	-		Pf1N1B4_2645	0.81	-0.3
2,984,709	-		Pf1N1B4_2645	0.81	-0.2
2,984,853	-				-0.5
2,984,853	-				+0.4
2,984,883	+				+0.3
2,984,883	+				+0.3
2,984,883	+				-0.3
2,984,884	-				+0.7
2,984,904	+				+0.0
2,984,904	+				+1.7
2,984,904	+				+0.9
2,984,904	+				+0.5
2,984,904	+				-0.7
2,984,904	+				-2.6
2,984,904	+				+1.3
2,984,904	+				+0.3
2,984,905	-				-0.4
2,984,905	-				-1.7
2,984,905	-				+0.5
2,984,905	-				-0.9
2,984,905	-				+0.8
2,984,906	+				+0.5
2,984,906	+				+0.9
2,984,906	+				+0.3
2,984,906	+				-0.1
2,984,907	-				-1.7
2,984,907	-				-0.2
2,984,907	-				+0.3
2,984,907	-				+0.6
2,984,907	-				+0.7
2,985,001	-		Pf1N1B4_2646	0.13	-0.1
2,985,078	+		Pf1N1B4_2646	0.24	+0.4
2,985,079	-		Pf1N1B4_2646	0.24	+1.1
2,985,079	-		Pf1N1B4_2646	0.24	-0.3
2,985,079	-		Pf1N1B4_2646	0.24	+1.0
2,985,178	-		Pf1N1B4_2646	0.37	-0.3
2,985,178	-		Pf1N1B4_2646	0.37	+1.5
2,985,178	-		Pf1N1B4_2646	0.37	+2.1
2,985,178	-		Pf1N1B4_2646	0.37	-1.2
2,985,391	+		Pf1N1B4_2646	0.66	+0.1
2,985,424	-		Pf1N1B4_2646	0.71	+0.6
2,985,520	+		Pf1N1B4_2646	0.84	+0.4
2,985,575	+				+1.3
2,985,575	+				-1.7
2,985,575	+				-1.3
2,985,576	-				+0.3
2,985,576	-				+1.3
2,985,576	-				-0.7
2,985,576	-				-0.9
2,985,577	+				+2.3
2,985,577	+				-0.2
2,985,578	-				+0.5
2,985,578	-				-1.3
2,985,578	-				-0.3
2,985,578	-				-0.1
2,985,844	+		Pf1N1B4_2647	0.45	-1.6
2,986,125	-				+0.1
2,986,140	-				+1.3
2,986,154	-				-0.3
2,986,154	-				-0.5
2,986,182	-				-0.9
2,986,585	+		Pf1N1B4_2648	0.79	-0.7