Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1870

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,139,469	+				-0.4
2,139,469	+				-1.4
2,139,495	-				-0.5
2,139,495	-				+0.0
2,139,705	+		Pf1N1B4_1869	0.27	-0.1
2,139,706	-		Pf1N1B4_1869	0.27	+0.2
2,139,706	-		Pf1N1B4_1869	0.27	+0.6
2,139,706	-		Pf1N1B4_1869	0.27	-1.5
2,139,856	+		Pf1N1B4_1869	0.46	-0.1
2,139,856	+		Pf1N1B4_1869	0.46	-0.1
2,139,862	+		Pf1N1B4_1869	0.47	+0.9
2,139,862	+		Pf1N1B4_1869	0.47	-0.0
2,139,862	+		Pf1N1B4_1869	0.47	-1.5
2,139,862	+		Pf1N1B4_1869	0.47	-0.1
2,139,862	+		Pf1N1B4_1869	0.47	+0.1
2,139,862	+		Pf1N1B4_1869	0.47	-0.3
2,139,862	+		Pf1N1B4_1869	0.47	+0.1
2,139,862	+		Pf1N1B4_1869	0.47	-1.4
2,139,862	+		Pf1N1B4_1869	0.47	+0.5
2,139,863	-		Pf1N1B4_1869	0.47	-0.7
2,139,863	-		Pf1N1B4_1869	0.47	-0.4
2,139,863	-		Pf1N1B4_1869	0.47	+1.0
2,139,863	-		Pf1N1B4_1869	0.47	+1.1
2,139,863	-		Pf1N1B4_1869	0.47	-0.3
2,139,863	-		Pf1N1B4_1869	0.47	-1.0
2,139,863	-		Pf1N1B4_1869	0.47	-1.5
2,139,865	+		Pf1N1B4_1869	0.47	-0.9
2,139,866	-		Pf1N1B4_1869	0.47	+0.5
2,139,941	+		Pf1N1B4_1869	0.57	-0.1
2,139,941	+		Pf1N1B4_1869	0.57	-1.4
2,139,942	-		Pf1N1B4_1869	0.57	-0.0
2,139,942	-		Pf1N1B4_1869	0.57	+0.7
2,139,979	+		Pf1N1B4_1869	0.62	+0.0
2,139,979	+		Pf1N1B4_1869	0.62	-0.5
2,139,979	+		Pf1N1B4_1869	0.62	-0.8
2,139,979	+		Pf1N1B4_1869	0.62	+1.5
2,139,979	+		Pf1N1B4_1869	0.62	-0.3
2,139,980	-		Pf1N1B4_1869	0.62	-1.5
2,139,980	-		Pf1N1B4_1869	0.62	+0.5
2,139,980	-		Pf1N1B4_1869	0.62	-0.5
2,139,980	-		Pf1N1B4_1869	0.62	-1.0
2,140,005	+		Pf1N1B4_1869	0.65	+0.4
2,140,006	-		Pf1N1B4_1869	0.65	-0.1
2,140,075	+		Pf1N1B4_1869	0.74	-1.0
2,140,185	-		Pf1N1B4_1869	0.88	-0.4
2,140,291	+				-0.5
2,140,291	+				+0.1
2,140,291	+				-0.5
2,140,291	+				-0.7
2,140,292	-				+1.5
2,140,292	-				+0.7
2,140,292	-				-0.1
2,140,292	-				+1.0
2,140,292	-				-0.5
2,140,292	-				+1.5
2,140,292	-				-1.4
2,140,292	-				-0.9
2,140,292	-				+0.2
2,140,378	-		Pf1N1B4_1870	0.13	-0.1
2,140,578	+		Pf1N1B4_1870	0.39	-1.1
2,140,579	-		Pf1N1B4_1870	0.39	-1.0
2,140,579	-		Pf1N1B4_1870	0.39	-0.5
2,140,613	+		Pf1N1B4_1870	0.43	-2.7
2,140,845	+		Pf1N1B4_1870	0.73	-1.1
2,140,957	+		Pf1N1B4_1870	0.87	-0.3
2,141,118	+		Pf1N1B4_1871	0.15	+0.4
2,141,119	-		Pf1N1B4_1871	0.15	-0.7
2,141,119	-		Pf1N1B4_1871	0.15	-0.7
2,141,205	+		Pf1N1B4_1871	0.36	+0.7
2,141,205	+		Pf1N1B4_1871	0.36	-0.4
2,141,205	+		Pf1N1B4_1871	0.36	+1.2
2,141,205	+		Pf1N1B4_1871	0.36	+0.2
2,141,206	-		Pf1N1B4_1871	0.36	-0.1
2,141,206	-		Pf1N1B4_1871	0.36	-0.7
2,141,278	+		Pf1N1B4_1871	0.54	-0.9
2,141,278	+		Pf1N1B4_1871	0.54	+0.0
2,141,278	+		Pf1N1B4_1871	0.54	+0.2
2,141,278	+		Pf1N1B4_1871	0.54	+0.1
2,141,279	-		Pf1N1B4_1871	0.54	-0.7
2,141,279	-		Pf1N1B4_1871	0.54	+0.6
2,141,279	-		Pf1N1B4_1871	0.54	+0.2
2,141,279	-		Pf1N1B4_1871	0.54	+0.0
2,141,279	-		Pf1N1B4_1871	0.54	+0.5
2,141,322	+		Pf1N1B4_1871	0.65	-1.5
2,141,322	+		Pf1N1B4_1871	0.65	-0.7
2,141,323	-		Pf1N1B4_1871	0.65	-1.1
2,141,323	-		Pf1N1B4_1871	0.65	-0.9
2,141,375	+		Pf1N1B4_1871	0.78	-1.7
2,141,376	-		Pf1N1B4_1871	0.78	-1.1
2,141,376	-		Pf1N1B4_1871	0.78	+1.5
2,141,376	-		Pf1N1B4_1871	0.78	+1.5
2,141,376	-		Pf1N1B4_1871	0.78	+0.7
2,141,376	-		Pf1N1B4_1871	0.78	-1.4
2,141,376	-		Pf1N1B4_1871	0.78	-1.2
2,141,487	+				+0.3
2,141,487	+				+0.8
2,141,487	+				+0.5
2,141,487	+				-0.1
2,141,488	-				+0.3
2,141,488	-				+1.1
2,141,488	-				+0.9
2,141,488	-				+0.1
2,141,488	-				+0.2
2,141,491	+				-0.8
2,141,491	+				+0.3
2,141,491	+				-1.4
2,141,491	+				-0.3
2,141,491	+				-0.1
2,141,491	+				+0.1
2,141,491	+				+0.7
2,141,491	+				-0.5
2,141,491	+				-0.5
2,141,491	+				-0.4
2,141,491	+				-0.1
2,141,491	+				-0.8
2,141,492	-				-0.5
2,141,492	-				+0.5
2,141,492	-				-0.1
2,141,492	-				-0.9
2,141,492	-				-1.0
2,141,492	-				-0.1
2,141,492	-				-0.4
2,141,492	-				-0.1
2,141,492	-				+1.5
2,141,492	-				-1.1
2,141,492	-				+0.1
2,141,492	-				+0.0
2,141,492	-				-1.1
2,141,535	+				-0.2
2,141,535	+				+0.9
2,141,535	+				+0.7
2,141,536	-				+0.1
2,141,573	+				-0.4
2,141,573	+				+0.0
2,141,573	+				-0.9
2,141,573	+				+0.2
2,141,574	-				-1.7
2,141,625	+				+0.5
2,141,741	+		Pf1N1B4_1872	0.15	+0.9
2,141,784	+		Pf1N1B4_1872	0.20	+0.2
2,141,785	-		Pf1N1B4_1872	0.20	-1.0
2,141,785	-		Pf1N1B4_1872	0.20	-1.7
2,141,785	-		Pf1N1B4_1872	0.20	+0.8
2,141,788	+		Pf1N1B4_1872	0.20	+0.9
2,141,788	+		Pf1N1B4_1872	0.20	+0.3
2,141,788	+		Pf1N1B4_1872	0.20	+1.1
2,141,788	+		Pf1N1B4_1872	0.20	-0.1
2,141,788	+		Pf1N1B4_1872	0.20	+0.1
2,141,788	+		Pf1N1B4_1872	0.20	-2.1
2,141,788	+		Pf1N1B4_1872	0.20	-2.5
2,141,788	+		Pf1N1B4_1872	0.20	+0.5
2,141,788	+		Pf1N1B4_1872	0.20	+0.5
2,141,789	-		Pf1N1B4_1872	0.20	-0.5
2,141,789	-		Pf1N1B4_1872	0.20	-0.5
2,141,789	-		Pf1N1B4_1872	0.20	-1.1
2,141,789	-		Pf1N1B4_1872	0.20	-0.9
2,141,789	-		Pf1N1B4_1872	0.20	-0.7
2,141,789	-		Pf1N1B4_1872	0.20	+1.1
2,141,789	-		Pf1N1B4_1872	0.20	-0.9
2,141,789	-		Pf1N1B4_1872	0.20	-0.3
2,141,789	-		Pf1N1B4_1872	0.20	-0.7
2,141,789	-		Pf1N1B4_1872	0.20	-1.7
2,141,789	-		Pf1N1B4_1872	0.20	+0.5
2,141,789	-		Pf1N1B4_1872	0.20	+0.1
2,141,810	+		Pf1N1B4_1872	0.23	-0.1
2,141,810	+		Pf1N1B4_1872	0.23	+0.6
2,141,810	+		Pf1N1B4_1872	0.23	+0.0
2,141,810	+		Pf1N1B4_1872	0.23	-1.4
2,141,811	-		Pf1N1B4_1872	0.23	+0.5
2,141,811	-		Pf1N1B4_1872	0.23	-0.0
2,141,892	+		Pf1N1B4_1872	0.32	+0.1
2,141,893	-		Pf1N1B4_1872	0.32	-1.5