Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1721

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,967,853	+		Pf1N1B4_1719	0.86	+0.4
1,967,975	+				+0.4
1,968,003	+				+0.4
1,968,003	+				+0.1
1,968,003	+				+0.4
1,968,003	+				-0.6
1,968,003	+				+0.7
1,968,003	+				-0.3
1,968,003	+				-0.7
1,968,003	+				-0.0
1,968,003	+				+1.4
1,968,004	-				+0.1
1,968,004	-				+1.4
1,968,004	-				-0.2
1,968,004	-				-1.5
1,968,004	-				+0.2
1,968,004	-				-0.9
1,968,004	-				-0.2
1,968,004	-				+0.3
1,968,004	-				-0.5
1,968,004	-				-0.6
1,968,004	-				+0.0
1,968,004	-				+2.2
1,968,004	-				-0.9
1,968,249	-				-0.2
1,968,249	-				+0.7
1,968,267	+				+0.4
1,968,267	+				+0.6
1,968,267	+				-1.2
1,968,268	-				+0.8
1,968,268	-				+0.6
1,968,330	+				+2.2
1,968,330	+				+0.4
1,968,330	+				-1.1
1,968,330	+				-0.9
1,968,330	+				-1.5
1,968,331	-				+0.7
1,968,331	-				-0.2
1,968,331	-				-0.6
1,968,331	-				+0.4
1,968,331	-				+0.7
1,968,335	-				-0.5
1,968,335	-				-1.6
1,968,335	-				-1.9
1,968,441	-				+1.4
1,968,441	-				-0.1
1,968,693	-				+0.4
1,968,715	-				-0.3
1,968,724	-				+0.3
1,968,724	-				-0.5
1,968,759	+				+1.4
1,968,760	-				+0.6
1,968,760	-				-0.3
1,968,760	-				+0.4
1,969,071	+		Pf1N1B4_1721	0.78	+0.4
1,969,072	-		Pf1N1B4_1721	0.78	-0.6
1,969,072	-		Pf1N1B4_1721	0.78	+0.1
1,969,079	-		Pf1N1B4_1721	0.80	+0.4
1,969,079	-		Pf1N1B4_1721	0.80	-0.6
1,969,079	-		Pf1N1B4_1721	0.80	-1.2
1,969,138	-				-0.4
1,969,182	-				-0.3
1,969,210	+				+0.4
1,969,305	-				+0.4
1,969,318	+				-0.5
1,969,319	-				-2.2
1,969,319	-				+0.4
1,969,323	+				+1.4
1,969,324	-				-1.5
1,969,324	-				+0.7
1,969,324	-				+0.2
1,969,580	-		Pf1N1B4_1722	0.46	+0.7
1,969,654	+		Pf1N1B4_1722	0.57	+0.9
1,969,654	+		Pf1N1B4_1722	0.57	+0.2
1,969,654	+		Pf1N1B4_1722	0.57	+0.3
1,969,654	+		Pf1N1B4_1722	0.57	-1.0
1,969,654	+		Pf1N1B4_1722	0.57	-1.4
1,969,655	-		Pf1N1B4_1722	0.57	+0.4
1,969,767	-		Pf1N1B4_1722	0.73	+0.4
1,969,767	-		Pf1N1B4_1722	0.73	-0.4
1,969,792	+		Pf1N1B4_1722	0.77	-0.0
1,969,793	-		Pf1N1B4_1722	0.77	-0.4
1,969,793	-		Pf1N1B4_1722	0.77	+1.8
1,969,793	-		Pf1N1B4_1722	0.77	+0.7
1,969,793	-		Pf1N1B4_1722	0.77	+0.3
1,969,824	+		Pf1N1B4_1722	0.82	+0.4
1,969,825	-		Pf1N1B4_1722	0.82	+0.4
1,969,874	+		Pf1N1B4_1722	0.89	-0.2
1,969,874	+		Pf1N1B4_1722	0.89	-1.4
1,969,874	+		Pf1N1B4_1722	0.89	-0.4
1,969,875	-		Pf1N1B4_1722	0.89	+0.3
1,969,882	-				-1.1
1,969,893	+				+0.2
1,969,893	+				+0.3
1,969,894	-				+0.8
1,969,894	-				+0.4
1,970,019	+				-0.1
1,970,020	-				+0.8
1,970,020	-				-1.1
1,970,020	-				-0.9
1,970,030	+				+0.2
1,970,030	+				+1.2
1,970,031	-				-0.9
1,970,031	-				+0.8
1,970,094	+		Pf1N1B4_1723	0.11	+1.6
1,970,095	-		Pf1N1B4_1723	0.12	-0.4
1,970,129	+		Pf1N1B4_1723	0.18	+0.5
1,970,129	+		Pf1N1B4_1723	0.18	+0.6
1,970,130	-		Pf1N1B4_1723	0.18	+0.8