Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_152
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
193,190 | + | +0.4 | |||
193,813 | + | -0.3 | |||
193,813 | + | -1.1 | |||
193,875 | + | +1.0 | |||
193,894 | + | -1.6 | |||
193,895 | - | -0.7 | |||
193,925 | + | +1.3 | |||
193,959 | + | +0.7 | |||
193,960 | - | +0.7 | |||
194,091 | + | -1.1 | |||
194,091 | + | -1.8 | |||
194,091 | + | -0.8 | |||
194,092 | - | +0.3 | |||
194,112 | + | +0.4 | |||
194,552 | + | Pf1N1B4_152 | 0.36 | -0.1 | |
194,718 | - | Pf1N1B4_152 | 0.51 | -2.4 | |
194,718 | - | Pf1N1B4_152 | 0.51 | -0.7 | |
194,725 | + | Pf1N1B4_152 | 0.52 | -0.3 | |
194,725 | + | Pf1N1B4_152 | 0.52 | -1.2 | |
194,856 | + | -1.6 | |||
194,857 | - | Pf1N1B4_152 | 0.64 | +1.2 | |
194,902 | + | Pf1N1B4_152 | 0.68 | -0.6 | |
195,024 | + | Pf1N1B4_152 | 0.79 | -0.1 | |
195,025 | - | Pf1N1B4_152 | 0.79 | -2.3 | |
195,445 | - | +0.6 | |||
195,449 | - | +0.1 | |||
195,871 | + | Pf1N1B4_153 | 0.22 | +1.6 | |
195,916 | + | Pf1N1B4_153 | 0.24 | -0.8 | |
195,917 | - | Pf1N1B4_153 | 0.24 | -0.8 | |
195,969 | - | Pf1N1B4_153 | 0.27 | -0.3 |
Or see this region's nucleotide sequence