Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1403

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,605,433	+				+0.1
1,605,434	-				+0.7
1,605,434	-				+0.4
1,605,463	+				+0.8
1,605,463	+				-1.6
1,605,463	+				-0.1
1,605,463	+				-0.3
1,605,463	+				+0.3
1,605,464	-				+0.9
1,605,464	-				-0.5
1,605,464	-				+2.3
1,605,464	-				-0.3
1,605,464	-				-0.7
1,605,535	+				+1.3
1,605,535	+				+1.9
1,605,536	-				-0.8
1,605,536	-				-1.3
1,605,562	+				+0.1
1,605,562	+				+0.9
1,605,562	+				-0.3
1,605,562	+				+0.3
1,605,562	+				-1.3
1,605,562	+				+2.3
1,605,563	-				-0.3
1,605,563	-				-0.1
1,605,563	-				-0.7
1,605,563	-				-1.4
1,605,563	-				-0.3
1,605,563	-				-0.1
1,605,699	-		Pf1N1B4_1402	0.16	+0.0
1,605,706	+		Pf1N1B4_1402	0.17	+0.5
1,605,706	+		Pf1N1B4_1402	0.17	+0.5
1,605,706	+		Pf1N1B4_1402	0.17	-0.0
1,605,706	+		Pf1N1B4_1402	0.17	-0.3
1,605,707	-		Pf1N1B4_1402	0.17	-1.0
1,605,707	-		Pf1N1B4_1402	0.17	-1.2
1,606,316	+				+0.9
1,606,316	+				+1.0
1,606,316	+				-0.3
1,606,316	+				+0.5
1,606,317	-				+1.7
1,606,317	-				-0.5
1,606,317	-				-0.3
1,606,317	-				-0.5
1,606,349	+				-2.4
1,606,350	-				-0.1
1,606,544	+				+0.8
1,606,837	-		Pf1N1B4_1403	0.19	-0.1
1,606,855	+		Pf1N1B4_1403	0.20	-0.5
1,606,856	-		Pf1N1B4_1403	0.20	+1.3
1,606,897	+		Pf1N1B4_1403	0.21	+1.3
1,606,897	+		Pf1N1B4_1403	0.21	+0.6
1,606,897	+		Pf1N1B4_1403	0.21	-2.1
1,606,897	+		Pf1N1B4_1403	0.21	-0.3
1,606,898	-		Pf1N1B4_1403	0.21	+0.7
1,606,898	-		Pf1N1B4_1403	0.21	-0.3
1,606,898	-		Pf1N1B4_1403	0.21	-0.4
1,607,230	+		Pf1N1B4_1403	0.34	-1.2
1,607,231	-		Pf1N1B4_1403	0.34	-0.7
1,607,239	+				+0.3
1,607,240	-		Pf1N1B4_1403	0.34	-1.8
1,607,275	+		Pf1N1B4_1403	0.36	+0.3
1,607,276	-		Pf1N1B4_1403	0.36	+1.9
1,607,276	-		Pf1N1B4_1403	0.36	-0.3
1,607,410	-		Pf1N1B4_1403	0.41	+0.9
1,607,410	-		Pf1N1B4_1403	0.41	-1.3
1,607,680	+		Pf1N1B4_1403	0.51	-1.3
1,607,723	-		Pf1N1B4_1403	0.53	-1.1
1,607,787	-		Pf1N1B4_1403	0.55	-1.3
1,607,788	+		Pf1N1B4_1403	0.55	+0.7
1,607,788	+		Pf1N1B4_1403	0.55	-1.7
1,607,789	-		Pf1N1B4_1403	0.55	+2.3
1,607,789	-		Pf1N1B4_1403	0.55	-1.8
1,607,824	+		Pf1N1B4_1403	0.57	-1.3
1,607,966	-		Pf1N1B4_1403	0.62	-0.7
1,607,966	-		Pf1N1B4_1403	0.62	-0.3
1,608,049	+		Pf1N1B4_1403	0.65	-0.1
1,608,049	+		Pf1N1B4_1403	0.65	-1.0
1,608,049	+		Pf1N1B4_1403	0.65	-1.0
1,608,049	+		Pf1N1B4_1403	0.65	-1.4
1,608,050	-		Pf1N1B4_1403	0.65	-1.3
1,608,050	-		Pf1N1B4_1403	0.65	+0.3
1,608,050	-		Pf1N1B4_1403	0.65	+0.6
1,608,262	+		Pf1N1B4_1403	0.73	+0.9
1,608,263	-				+0.3
1,608,263	-		Pf1N1B4_1403	0.73	-1.4
1,608,263	-		Pf1N1B4_1403	0.73	-0.7
1,608,263	-				-0.3
1,608,304	+		Pf1N1B4_1403	0.75	+0.3
1,608,304	+		Pf1N1B4_1403	0.75	+0.0
1,608,305	-		Pf1N1B4_1403	0.75	+0.1
1,608,305	-		Pf1N1B4_1403	0.75	-0.5
1,608,305	-		Pf1N1B4_1403	0.75	-0.7
1,608,305	-		Pf1N1B4_1403	0.75	+0.3
1,608,487	+		Pf1N1B4_1403	0.82	-0.6
1,608,727	+				-1.0
1,608,727	+				+0.1
1,608,727	+				-1.7
1,608,728	-				+0.2
1,608,728	-				+0.1
1,608,745	+				-0.7
1,608,745	+				-0.7
1,608,745	+				+0.6
1,608,746	-				-1.3
1,608,986	+				+1.0
1,608,997	+				+0.3
1,609,050	+				-0.8
1,609,367	+				+0.0
1,609,367	+				+0.7
1,609,367	+				-0.1
1,609,368	-				-0.8
1,609,434	-				-1.0
1,609,434	-				+0.3
1,609,434	-				-0.3
1,609,516	+				+0.2
1,609,517	-				-2.3
1,609,575	+				+0.3
1,609,627	+				-2.0
1,609,718	+		Pf1N1B4_1404	0.10	-1.7
1,609,718	+		Pf1N1B4_1404	0.10	+1.6
1,609,718	+		Pf1N1B4_1404	0.10	+1.0
1,609,718	+		Pf1N1B4_1404	0.10	+0.0
1,609,719	-		Pf1N1B4_1404	0.10	-1.0
1,609,719	-		Pf1N1B4_1404	0.10	+0.9
1,609,719	-		Pf1N1B4_1404	0.10	-1.0
1,609,719	-		Pf1N1B4_1404	0.10	-0.3
1,609,719	-		Pf1N1B4_1404	0.10	+1.9
1,609,868	+		Pf1N1B4_1404	0.25	+1.3
1,609,868	+		Pf1N1B4_1404	0.25	+1.3
1,609,868	+		Pf1N1B4_1404	0.25	+0.6
1,609,869	-		Pf1N1B4_1404	0.25	+0.7
1,609,869	-				-0.3
1,609,869	-		Pf1N1B4_1404	0.25	+0.5
1,609,869	-		Pf1N1B4_1404	0.25	+1.3
1,609,869	-		Pf1N1B4_1404	0.25	-0.1
1,609,869	-		Pf1N1B4_1404	0.25	+0.2
1,609,961	+		Pf1N1B4_1404	0.34	+0.7
1,609,961	+		Pf1N1B4_1404	0.34	+1.6
1,609,961	+		Pf1N1B4_1404	0.34	+0.2
1,609,961	+		Pf1N1B4_1404	0.34	+1.1
1,609,962	-		Pf1N1B4_1404	0.35	+0.1
1,609,962	-		Pf1N1B4_1404	0.35	+0.9
1,609,962	-		Pf1N1B4_1404	0.35	+0.5
1,609,962	-		Pf1N1B4_1404	0.35	+2.9