Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03301

Experiment: PYE with Benzethonium chloride 0.001 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzethonium chloride 0.001 mM
3,474,366	-		CCNA_03300	0.16	-3.5
3,474,375	+		CCNA_03300	0.17	-2.5
3,474,375	+		CCNA_03300	0.17	-0.2
3,474,375	+		CCNA_03300	0.17	-2.9
3,474,409	+		CCNA_03300	0.20	-1.9
3,474,415	+		CCNA_03300	0.21	-2.7
3,474,425	-		CCNA_03300	0.22	-2.2
3,474,435	-		CCNA_03300	0.22	-2.4
3,474,456	-		CCNA_03300	0.24	-3.5
3,474,456	-		CCNA_03300	0.24	-2.1
3,474,479	+		CCNA_03300	0.26	-2.1
3,474,479	+		CCNA_03300	0.26	-3.2
3,474,479	+		CCNA_03300	0.26	-2.0
3,474,479	+		CCNA_03300	0.26	-2.2
3,474,484	+		CCNA_03300	0.27	-2.4
3,474,487	-		CCNA_03300	0.27	-0.5
3,474,487	-		CCNA_03300	0.27	-1.3
3,474,487	-		CCNA_03300	0.27	-1.4
3,474,487	-		CCNA_03300	0.27	-1.9
3,474,487	-		CCNA_03300	0.27	-1.9
3,474,487	-		CCNA_03300	0.27	-0.8
3,474,487	-		CCNA_03300	0.27	-1.9
3,474,487	-		CCNA_03300	0.27	+0.0
3,474,522	-		CCNA_03300	0.30	-0.5
3,474,526	-		CCNA_03300	0.31	-2.3
3,474,538	+		CCNA_03300	0.32	-1.4
3,474,541	-		CCNA_03300	0.32	-1.5
3,474,546	-		CCNA_03300	0.32	-0.1
3,474,548	-		CCNA_03300	0.33	+1.9
3,474,587	+		CCNA_03300	0.36	-3.0
3,474,587	+		CCNA_03300	0.36	-1.9
3,474,587	+		CCNA_03300	0.36	-3.0
3,474,593	+		CCNA_03300	0.37	-0.3
3,474,595	-		CCNA_03300	0.37	-1.4
3,474,601	-		CCNA_03300	0.37	-2.9
3,474,601	-		CCNA_03300	0.37	-1.7
3,474,633	+		CCNA_03300	0.40	-0.8
3,474,640	+		CCNA_03300	0.41	+0.2
3,474,648	-		CCNA_03300	0.42	+0.3
3,474,648	-		CCNA_03300	0.42	-0.4
3,474,648	-				+3.5
3,474,671	+		CCNA_03300	0.44	-1.6
3,474,671	+		CCNA_03300	0.44	-1.8
3,474,671	+		CCNA_03300	0.44	-3.6
3,474,679	-		CCNA_03300	0.44	-1.1
3,474,679	-		CCNA_03300	0.44	-0.9
3,474,685	-		CCNA_03300	0.45	-2.3
3,474,686	-		CCNA_03300	0.45	-2.1
3,474,694	+		CCNA_03300	0.46	-2.7
3,474,704	+		CCNA_03300	0.47	-2.7
3,474,748	-		CCNA_03300	0.51	+1.5
3,474,851	+		CCNA_03300	0.60	-1.7
3,474,859	-		CCNA_03300	0.61	-2.8
3,474,885	+		CCNA_03300	0.63	-2.2
3,474,885	+		CCNA_03300	0.63	-2.5
3,474,898	-		CCNA_03300	0.64	-1.0
3,474,910	+		CCNA_03300	0.65	-2.4
3,474,934	-		CCNA_03300	0.67	-2.3
3,474,947	-		CCNA_03300	0.69	+0.9
3,474,954	+		CCNA_03300	0.69	-0.4
3,474,996	-		CCNA_03300	0.73	-1.6
3,475,014	-		CCNA_03300	0.75	-3.2
3,475,074	+		CCNA_03300	0.80	-3.2
3,475,082	-		CCNA_03300	0.81	-1.3
3,475,093	+		CCNA_03300	0.82	-1.1
3,475,108	-		CCNA_03300	0.83	-2.6
3,475,175	-		CCNA_03300	0.89	-1.1
3,475,197	+				-2.2
3,475,197	+				-1.3
3,475,201	-				-1.9
3,475,205	-				-2.3
3,475,242	+				-3.3
3,475,275	+				-1.6
3,475,301	-				-0.5
3,475,309	+				-2.3
3,475,311	+				-1.4
3,475,316	+				-2.0
3,475,317	-				-0.5
3,475,334	+				-3.4
3,475,355	-				-2.6
3,475,394	+				-1.3
3,475,394	+				+1.2
3,475,395	-				+0.5
3,475,402	-				-1.7
3,475,422	+				-1.9
3,475,430	-				-1.5
3,475,430	-				-2.9
3,475,444	+				+0.0
3,475,473	+				-2.9
3,475,479	+				-0.9
3,475,484	+				-2.3
3,475,564	+				-2.6
3,475,564	+				-2.4
3,475,572	-				-0.2
3,475,594	-				-1.8
3,475,597	-				-1.8
3,475,634	+		CCNA_03301	0.11	-1.4
3,475,652	+		CCNA_03301	0.11	-3.5
3,475,681	-		CCNA_03301	0.12	-0.2
3,475,683	+		CCNA_03301	0.12	-3.4
3,475,686	-		CCNA_03301	0.13	-0.5
3,475,688	+		CCNA_03301	0.13	+0.9
3,475,688	+		CCNA_03301	0.13	-2.3
3,475,688	+		CCNA_03301	0.13	-0.7
3,475,688	+		CCNA_03301	0.13	-2.4
3,475,688	+		CCNA_03301	0.13	-1.1
3,475,696	-		CCNA_03301	0.13	-1.7
3,475,696	-		CCNA_03301	0.13	+0.3
3,475,696	-		CCNA_03301	0.13	-1.0
3,475,790	+		CCNA_03301	0.16	-2.2
3,475,790	+		CCNA_03301	0.16	-1.8
3,475,790	+		CCNA_03301	0.16	-1.6
3,475,790	+		CCNA_03301	0.16	-1.9
3,475,790	+		CCNA_03301	0.16	-2.8
3,475,793	-		CCNA_03301	0.16	-0.8
3,475,803	-		CCNA_03301	0.16	-0.3
3,475,805	+		CCNA_03301	0.16	-2.2
3,475,808	-		CCNA_03301	0.16	-0.7
3,475,834	+		CCNA_03301	0.17	-0.5
3,475,916	+		CCNA_03301	0.20	-2.9
3,475,949	-		CCNA_03301	0.21	-0.6
3,476,010	+		CCNA_03301	0.23	-2.8
3,476,010	+		CCNA_03301	0.23	-1.6
3,476,096	+		CCNA_03301	0.26	+0.1
3,476,138	-		CCNA_03301	0.27	-1.0
3,476,145	+		CCNA_03301	0.27	-2.9
3,476,161	+		CCNA_03301	0.28	-1.8
3,476,219	+		CCNA_03301	0.30	-0.3
3,476,227	-		CCNA_03301	0.30	-0.4
3,476,227	-		CCNA_03301	0.30	-2.0
3,476,227	-		CCNA_03301	0.30	-2.7
3,476,227	-		CCNA_03301	0.30	+0.0
3,476,303	+		CCNA_03301	0.32	-1.4
3,476,311	-		CCNA_03301	0.33	-3.3
3,476,318	+		CCNA_03301	0.33	-1.0
3,476,320	+		CCNA_03301	0.33	-0.1
3,476,328	-		CCNA_03301	0.33	-1.4
3,476,330	+		CCNA_03301	0.33	-2.8
3,476,333	+		CCNA_03301	0.33	-2.1
3,476,334	+		CCNA_03301	0.33	-2.9
3,476,352	-		CCNA_03301	0.34	-1.6
3,476,413	-		CCNA_03301	0.36	-0.8
3,476,413	-		CCNA_03301	0.36	-2.2
3,476,413	-		CCNA_03301	0.36	-0.4
3,476,413	-		CCNA_03301	0.36	-0.9
3,476,413	-		CCNA_03301	0.36	-3.2
3,476,418	-		CCNA_03301	0.36	-1.8
3,476,441	+		CCNA_03301	0.37	+0.0
3,476,493	-		CCNA_03301	0.38	-0.7
3,476,502	+		CCNA_03301	0.39	-1.2
3,476,506	+		CCNA_03301	0.39	-2.5
3,476,509	-				+0.9
3,476,510	-		CCNA_03301	0.39	-1.9
3,476,525	+		CCNA_03301	0.39	-2.4
3,476,600	+		CCNA_03301	0.42	-2.4
3,476,608	-		CCNA_03301	0.42	-2.0
3,476,645	+		CCNA_03301	0.43	-1.2
3,476,720	+		CCNA_03301	0.46	-1.6
3,476,733	-		CCNA_03301	0.46	-1.7
3,476,741	-		CCNA_03301	0.46	-0.1
3,476,768	-		CCNA_03301	0.47	-1.2
3,476,806	+		CCNA_03301	0.48	-3.6
3,476,814	-		CCNA_03301	0.49	+0.7
3,476,832	-		CCNA_03301	0.49	-1.8
3,476,855	+		CCNA_03301	0.50	-1.6
3,476,855	+		CCNA_03301	0.50	-2.1
3,476,855	+		CCNA_03301	0.50	-2.3
3,476,855	+		CCNA_03301	0.50	-2.4
3,476,855	+		CCNA_03301	0.50	-1.7
3,476,863	-		CCNA_03301	0.50	+0.7
3,476,863	-		CCNA_03301	0.50	-1.9
3,476,863	-		CCNA_03301	0.50	-2.0
3,476,863	-		CCNA_03301	0.50	-1.5
3,476,881	+		CCNA_03301	0.51	-0.6
3,476,884	-		CCNA_03301	0.51	+2.5
3,476,890	-		CCNA_03301	0.51	-2.3
3,476,890	-		CCNA_03301	0.51	-0.7
3,476,992	+		CCNA_03301	0.54	-2.1
3,476,993	+		CCNA_03301	0.54	-2.5
3,477,023	+		CCNA_03301	0.55	-1.7
3,477,031	-		CCNA_03301	0.56	-2.9
3,477,031	-		CCNA_03301	0.56	+0.4
3,477,031	-		CCNA_03301	0.56	+0.2
3,477,046	-		CCNA_03301	0.56	-0.8
3,477,046	-				+1.2
3,477,046	-		CCNA_03301	0.56	+0.3
3,477,100	-		CCNA_03301	0.58	-2.4
3,477,128	+		CCNA_03301	0.59	-1.5
3,477,128	+		CCNA_03301	0.59	-2.6
3,477,128	+		CCNA_03301	0.59	-1.4
3,477,128	+		CCNA_03301	0.59	-1.3
3,477,133	+		CCNA_03301	0.59	-2.2
3,477,136	-		CCNA_03301	0.59	-1.6
3,477,191	-		CCNA_03301	0.61	-1.0
3,477,210	+		CCNA_03301	0.61	-1.7
3,477,217	+		CCNA_03301	0.61	-2.0
3,477,226	-		CCNA_03301	0.62	-2.1
3,477,228	+		CCNA_03301	0.62	-2.3
3,477,237	-		CCNA_03301	0.62	-0.2
3,477,279	+		CCNA_03301	0.63	-1.3
3,477,279	+		CCNA_03301	0.63	-2.5
3,477,279	+		CCNA_03301	0.63	-1.1
3,477,279	+		CCNA_03301	0.63	-1.1
3,477,279	+		CCNA_03301	0.63	-0.1
3,477,282	+		CCNA_03301	0.64	-2.6
3,477,286	+		CCNA_03301	0.64	+0.7
3,477,287	+		CCNA_03301	0.64	-1.1
3,477,287	-		CCNA_03301	0.64	-1.4
3,477,287	-		CCNA_03301	0.64	+0.2
3,477,287	-		CCNA_03301	0.64	-2.0
3,477,287	-		CCNA_03301	0.64	-2.4
3,477,287	-		CCNA_03301	0.64	-3.4
3,477,295	-		CCNA_03301	0.64	+0.3
3,477,318	-		CCNA_03301	0.65	-2.2
3,477,356	+		CCNA_03301	0.66	-1.8
3,477,364	-		CCNA_03301	0.66	-1.5
3,477,365	-		CCNA_03301	0.66	-1.5
3,477,370	-		CCNA_03301	0.66	-1.3
3,477,424	-		CCNA_03301	0.68	-3.7
3,477,479	+		CCNA_03301	0.70	-1.1
3,477,493	+		CCNA_03301	0.70	-0.4
3,477,561	+		CCNA_03301	0.72	-2.2
3,477,569	-		CCNA_03301	0.73	-1.2
3,477,685	+		CCNA_03301	0.76	-2.0
3,477,721	-		CCNA_03301	0.78	+0.3
3,477,734	+		CCNA_03301	0.78	-0.1
3,477,734	+		CCNA_03301	0.78	-1.2
3,477,739	+		CCNA_03301	0.78	-1.6
3,477,766	-		CCNA_03301	0.79	-1.0
3,477,896	+		CCNA_03301	0.83	-2.9
3,477,898	-		CCNA_03301	0.83	-1.7
3,477,910	-		CCNA_03301	0.84	+0.4
3,477,936	+		CCNA_03301	0.84	-1.6
3,477,953	+		CCNA_03301	0.85	-1.3
3,477,990	+		CCNA_03301	0.86	-1.2
3,478,123	+				-2.9
3,478,132	-				-1.1
3,478,137	-				-0.5
3,478,185	+				-2.2
3,478,241	+				-1.6
3,478,260	-				-0.3
3,478,260	-				-2.5
3,478,260	-				-0.7
3,478,287	+				-2.2
3,478,287	+				-2.8
3,478,295	+				-3.4
3,478,295	-				-2.1
3,478,295	-				-2.3
3,478,314	-				+0.3
3,478,394	+				-1.4
3,478,396	+				+1.3
3,478,404	-				-2.7
3,478,404	-				+0.2
3,478,424	+				+1.4
3,478,424	+				+1.3
3,478,458	-				-1.0
3,478,466	+				-0.9
3,478,472	+				+1.3
3,478,472	+				-0.9
3,478,478	-				+0.8
3,478,480	-				+0.7
3,478,480	-				+1.6
3,478,480	-				+1.1
3,478,480	-				+1.4
3,478,480	-				+0.7
3,478,480	-				-0.6
3,478,480	-				+1.4
3,478,480	-				+0.8
3,478,480	-				+0.1
3,478,495	+				+0.1
3,478,500	+				-0.4
3,478,532	+				+1.5
3,478,571	+				-0.9
3,478,589	+		CCNA_03302	0.12	-0.2
3,478,589	+		CCNA_03302	0.12	+1.4
3,478,589	-		CCNA_03302	0.12	+0.4
3,478,597	-		CCNA_03302	0.12	+1.9
3,478,599	+		CCNA_03302	0.13	+0.2
3,478,604	+		CCNA_03302	0.13	-0.9
3,478,613	-		CCNA_03302	0.14	-0.5
3,478,650	+		CCNA_03302	0.18	-0.1
3,478,657	+		CCNA_03302	0.19	-0.2
3,478,658	-		CCNA_03302	0.19	+1.7
3,478,662	+		CCNA_03302	0.19	+1.9
3,478,662	+		CCNA_03302	0.19	-0.2
3,478,662	+		CCNA_03302	0.19	+0.4
3,478,662	+		CCNA_03302	0.19	-0.2
3,478,662	+		CCNA_03302	0.19	-0.4
3,478,662	+		CCNA_03302	0.19	-0.9
3,478,670	-		CCNA_03302	0.20	+1.4
3,478,670	-		CCNA_03302	0.20	+1.4
3,478,670	-		CCNA_03302	0.20	+1.8
3,478,670	-		CCNA_03302	0.20	+1.0
3,478,670	-		CCNA_03302	0.20	+1.5
3,478,670	-		CCNA_03302	0.20	+1.2
3,478,670	-		CCNA_03302	0.20	+1.5
3,478,670	-		CCNA_03302	0.20	+1.6
3,478,679	-		CCNA_03302	0.21	+1.1
3,478,683	+		CCNA_03302	0.21	+0.3
3,478,690	-		CCNA_03302	0.22	+0.8
3,478,707	+		CCNA_03302	0.24	+0.9
3,478,708	+		CCNA_03302	0.24	+0.1
3,478,732	+		CCNA_03302	0.26	+1.2
3,478,740	-		CCNA_03302	0.27	+1.2
3,478,741	+		CCNA_03302	0.27	+0.2
3,478,818	+		CCNA_03302	0.35	-1.2
3,478,820	-		CCNA_03302	0.35	+0.6
3,478,895	+		CCNA_03302	0.43	-0.2
3,478,895	+		CCNA_03302	0.43	-0.4
3,478,896	-		CCNA_03302	0.43	+1.5
3,478,900	+		CCNA_03302	0.43	-0.2
3,478,903	-		CCNA_03302	0.44	+1.1
3,478,903	-		CCNA_03302	0.44	+0.6
3,478,958	-		CCNA_03302	0.49	+0.7
3,478,978	-		CCNA_03302	0.51	+1.0
3,479,005	-		CCNA_03302	0.54	+0.7
3,479,026	-		CCNA_03302	0.56	+0.8
3,479,026	-		CCNA_03302	0.56	+0.9
3,479,057	-		CCNA_03302	0.59	+1.4
3,479,106	+		CCNA_03302	0.64	-0.8
3,479,113	-		CCNA_03302	0.65	+1.2
3,479,124	-		CCNA_03302	0.66	+0.6
3,479,124	-		CCNA_03302	0.66	+0.8
3,479,171	-		CCNA_03302	0.71	+0.7
3,479,179	+		CCNA_03302	0.72	+0.4
3,479,185	+		CCNA_03302	0.72	+0.5
3,479,187	-		CCNA_03302	0.72	+2.2
3,479,193	-		CCNA_03302	0.73	+2.0
3,479,236	-		CCNA_03302	0.77	+0.7
3,479,247	-		CCNA_03302	0.79	+1.0
3,479,260	-		CCNA_03302	0.80	+0.8
3,479,260	-		CCNA_03302	0.80	+1.1
3,479,262	+		CCNA_03302	0.80	+0.5
3,479,262	+		CCNA_03302	0.80	+0.3
3,479,274	+		CCNA_03302	0.81	+0.9
3,479,284	+		CCNA_03302	0.82	-1.5
3,479,329	+		CCNA_03302	0.87	+0.3
3,479,362	+				+1.5
3,479,365	-				+0.4
3,479,369	+				-1.3