Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03299

Experiment: PYE with Benzethonium chloride 0.001 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzethonium chloride 0.001 mM
3,471,845	+		CCNA_03298	0.78	-0.7
3,471,860	+		CCNA_03298	0.79	-0.3
3,471,892	-		CCNA_03298	0.80	+0.2
3,471,900	+		CCNA_03298	0.80	-0.5
3,471,901	-		CCNA_03298	0.80	-0.6
3,471,908	-		CCNA_03298	0.80	+1.0
3,471,923	+		CCNA_03298	0.80	-0.8
3,471,953	-		CCNA_03298	0.81	-0.1
3,471,961	+		CCNA_03298	0.82	-1.6
3,471,961	+		CCNA_03298	0.82	-0.4
3,471,961	+		CCNA_03298	0.82	+1.5
3,471,969	-		CCNA_03298	0.82	+1.9
3,471,969	-		CCNA_03298	0.82	+0.9
3,471,987	-		CCNA_03298	0.82	-0.2
3,472,004	+		CCNA_03298	0.83	+1.7
3,472,004	-		CCNA_03298	0.83	-0.1
3,472,029	+		CCNA_03298	0.84	-0.2
3,472,044	-		CCNA_03298	0.84	+0.2
3,472,054	+		CCNA_03298	0.84	+1.8
3,472,118	-		CCNA_03298	0.86	-0.7
3,472,120	+		CCNA_03298	0.86	-1.1
3,472,120	+		CCNA_03298	0.86	-2.2
3,472,133	-		CCNA_03298	0.87	-1.6
3,472,133	-		CCNA_03298	0.87	-0.1
3,472,133	-		CCNA_03298	0.87	-0.9
3,472,146	+		CCNA_03298	0.87	-0.7
3,472,152	+		CCNA_03298	0.87	-2.1
3,472,155	-		CCNA_03298	0.87	+0.4
3,472,172	-		CCNA_03298	0.88	-1.4
3,472,172	-		CCNA_03298	0.88	-1.0
3,472,219	-		CCNA_03298	0.89	+1.2
3,472,292	+				-1.7
3,472,300	-				-0.2
3,472,302	+				-0.7
3,472,357	+				-0.2
3,472,511	+				+1.1
3,472,564	+				+1.3
3,472,578	-				+3.2
3,472,586	-				+0.8
3,472,586	-				-1.2
3,472,588	+				+0.4
3,472,596	-				-1.8
3,472,596	-				-1.3
3,472,609	+				-1.8
3,472,627	-				-0.5
3,472,628	-				-2.1
3,472,649	+				-2.2
3,472,654	+				-0.2
3,472,661	-				-1.3
3,472,670	-				-0.9
3,472,686	+				+1.9
3,472,755	-				-0.4
3,472,757	+				-2.3
3,472,762	+				-1.7
3,472,765	-				-0.7
3,472,774	+				-1.3
3,472,775	-				-0.2
3,472,776	-				+0.7
3,472,782	-				+0.9
3,472,833	+				-3.0
3,472,840	+				-3.1
3,472,854	+				-2.1
3,472,867	-				-0.3
3,472,876	+		CCNA_03299	0.11	-2.4
3,472,888	-		CCNA_03299	0.11	-1.3
3,472,895	+		CCNA_03299	0.12	-3.5
3,472,895	+		CCNA_03299	0.12	-1.9
3,472,903	-		CCNA_03299	0.12	-2.8
3,472,909	+		CCNA_03299	0.13	-0.7
3,472,928	-		CCNA_03299	0.14	-2.1
3,472,944	-		CCNA_03299	0.15	-1.8
3,472,951	+		CCNA_03299	0.15	-1.8
3,472,954	-		CCNA_03299	0.16	-2.7
3,472,970	+		CCNA_03299	0.17	-1.4
3,473,001	+		CCNA_03299	0.19	-2.4
3,473,041	-		CCNA_03299	0.21	-1.9
3,473,052	-		CCNA_03299	0.22	-2.1
3,473,052	-		CCNA_03299	0.22	-1.2
3,473,057	-		CCNA_03299	0.22	-1.1
3,473,098	+		CCNA_03299	0.25	-1.2
3,473,100	-		CCNA_03299	0.25	-0.1
3,473,119	-		CCNA_03299	0.27	+1.8
3,473,138	+		CCNA_03299	0.28	-2.4
3,473,138	+		CCNA_03299	0.28	-1.0
3,473,138	+		CCNA_03299	0.28	-2.4
3,473,158	+		CCNA_03299	0.29	-1.4
3,473,171	-		CCNA_03299	0.30	-2.0
3,473,236	+		CCNA_03299	0.34	+0.0
3,473,236	+		CCNA_03299	0.34	-0.2
3,473,244	+		CCNA_03299	0.35	-1.9
3,473,252	-		CCNA_03299	0.35	-0.3
3,473,252	-		CCNA_03299	0.35	-0.4
3,473,310	+		CCNA_03299	0.39	-1.8
3,473,310	+		CCNA_03299	0.39	-2.5
3,473,318	-		CCNA_03299	0.40	-0.5
3,473,318	-		CCNA_03299	0.40	-0.5
3,473,404	-		CCNA_03299	0.45	+0.3
3,473,429	+		CCNA_03299	0.47	-0.8
3,473,437	+		CCNA_03299	0.48	-2.4
3,473,456	+		CCNA_03299	0.49	-2.4
3,473,466	+		CCNA_03299	0.50	+0.7
3,473,481	-		CCNA_03299	0.51	-1.7
3,473,499	+		CCNA_03299	0.52	-0.8
3,473,499	+		CCNA_03299	0.52	-2.7
3,473,499	+		CCNA_03299	0.52	-3.2
3,473,521	+		CCNA_03299	0.53	-2.8
3,473,521	+		CCNA_03299	0.53	-0.4
3,473,521	+		CCNA_03299	0.53	+0.0
3,473,521	+		CCNA_03299	0.53	-2.7
3,473,521	+		CCNA_03299	0.53	-3.4
3,473,529	-		CCNA_03299	0.54	-0.4
3,473,529	-		CCNA_03299	0.54	-1.3
3,473,529	-		CCNA_03299	0.54	-2.5
3,473,529	-		CCNA_03299	0.54	-2.6
3,473,529	-		CCNA_03299	0.54	-1.6
3,473,568	+		CCNA_03299	0.56	-1.0
3,473,575	+		CCNA_03299	0.57	-0.9
3,473,636	+		CCNA_03299	0.61	-0.8
3,473,642	-		CCNA_03299	0.61	+0.9
3,473,644	-		CCNA_03299	0.61	+0.7
3,473,644	-		CCNA_03299	0.61	+0.3
3,473,644	-		CCNA_03299	0.61	-3.0
3,473,644	-		CCNA_03299	0.61	-1.6
3,473,644	-		CCNA_03299	0.61	-1.6
3,473,644	-		CCNA_03299	0.61	-1.6
3,473,654	-		CCNA_03299	0.62	-1.0
3,473,662	+		CCNA_03299	0.62	-1.5
3,473,670	-				+0.9
3,473,674	+		CCNA_03299	0.63	-1.3
3,473,709	+		CCNA_03299	0.66	-1.4
3,473,709	+		CCNA_03299	0.66	-2.8
3,473,709	+		CCNA_03299	0.66	-2.5
3,473,717	-		CCNA_03299	0.66	-0.7
3,473,717	-		CCNA_03299	0.66	-1.3
3,473,808	-		CCNA_03299	0.72	-1.0
3,473,847	-		CCNA_03299	0.75	-0.4
3,473,849	+		CCNA_03299	0.75	-1.5
3,473,867	+		CCNA_03299	0.76	-1.3
3,473,875	-		CCNA_03299	0.77	-0.0
3,473,898	+		CCNA_03299	0.78	-0.2
3,473,898	-		CCNA_03299	0.78	-1.3
3,473,923	+		CCNA_03299	0.80	-2.4
3,473,923	+		CCNA_03299	0.80	-4.3
3,473,931	-		CCNA_03299	0.80	-0.6
3,473,931	-		CCNA_03299	0.80	+0.3
3,473,931	-		CCNA_03299	0.80	-0.1
3,473,958	+		CCNA_03299	0.82	-1.6
3,473,977	-		CCNA_03299	0.83	-2.8
3,474,004	+		CCNA_03299	0.85	-2.3
3,474,004	+		CCNA_03299	0.85	-2.5
3,474,079	+				+0.3
3,474,081	+				-1.7
3,474,096	+				-1.3
3,474,104	-				-0.3
3,474,130	+				-3.2
3,474,143	-				-0.3
3,474,165	+				-0.8
3,474,172	-				-0.4
3,474,172	-				-1.3
3,474,180	-				-1.3
3,474,180	-				-1.6
3,474,197	+				-0.5
3,474,215	-				+0.3
3,474,267	+				-1.0
3,474,267	+				-1.5
3,474,267	+				-1.8
3,474,267	+				-1.6
3,474,267	+				-1.6
3,474,272	+				-2.0
3,474,272	+				-1.7
3,474,272	+				-2.2
3,474,272	+				+0.5
3,474,275	-				-0.5
3,474,275	-				+0.2
3,474,275	-				-1.2
3,474,275	-				+0.0
3,474,366	-		CCNA_03300	0.16	-3.5
3,474,375	+		CCNA_03300	0.17	-2.5
3,474,375	+		CCNA_03300	0.17	-0.2
3,474,375	+		CCNA_03300	0.17	-2.9
3,474,409	+		CCNA_03300	0.20	-1.9
3,474,415	+		CCNA_03300	0.21	-2.7
3,474,425	-		CCNA_03300	0.22	-2.2
3,474,435	-		CCNA_03300	0.22	-2.4
3,474,456	-		CCNA_03300	0.24	-3.5
3,474,456	-		CCNA_03300	0.24	-2.1
3,474,479	+		CCNA_03300	0.26	-2.1
3,474,479	+		CCNA_03300	0.26	-3.2
3,474,479	+		CCNA_03300	0.26	-2.0
3,474,479	+		CCNA_03300	0.26	-2.2
3,474,484	+		CCNA_03300	0.27	-2.4
3,474,487	-		CCNA_03300	0.27	-0.5
3,474,487	-		CCNA_03300	0.27	-1.3
3,474,487	-		CCNA_03300	0.27	-1.4
3,474,487	-		CCNA_03300	0.27	-1.9
3,474,487	-		CCNA_03300	0.27	-1.9
3,474,487	-		CCNA_03300	0.27	-0.8
3,474,487	-		CCNA_03300	0.27	-1.9
3,474,487	-		CCNA_03300	0.27	+0.0
3,474,522	-		CCNA_03300	0.30	-0.5
3,474,526	-		CCNA_03300	0.31	-2.3
3,474,538	+		CCNA_03300	0.32	-1.4
3,474,541	-		CCNA_03300	0.32	-1.5
3,474,546	-		CCNA_03300	0.32	-0.1
3,474,548	-		CCNA_03300	0.33	+1.9
3,474,587	+		CCNA_03300	0.36	-3.0
3,474,587	+		CCNA_03300	0.36	-1.9
3,474,587	+		CCNA_03300	0.36	-3.0
3,474,593	+		CCNA_03300	0.37	-0.3
3,474,595	-		CCNA_03300	0.37	-1.4
3,474,601	-		CCNA_03300	0.37	-2.9
3,474,601	-		CCNA_03300	0.37	-1.7
3,474,633	+		CCNA_03300	0.40	-0.8
3,474,640	+		CCNA_03300	0.41	+0.2
3,474,648	-		CCNA_03300	0.42	+0.3
3,474,648	-		CCNA_03300	0.42	-0.4
3,474,648	-				+3.5
3,474,671	+		CCNA_03300	0.44	-1.6
3,474,671	+		CCNA_03300	0.44	-1.8
3,474,671	+		CCNA_03300	0.44	-3.6
3,474,679	-		CCNA_03300	0.44	-1.1
3,474,679	-		CCNA_03300	0.44	-0.9
3,474,685	-		CCNA_03300	0.45	-2.3
3,474,686	-		CCNA_03300	0.45	-2.1
3,474,694	+		CCNA_03300	0.46	-2.7
3,474,704	+		CCNA_03300	0.47	-2.7
3,474,748	-		CCNA_03300	0.51	+1.5
3,474,851	+		CCNA_03300	0.60	-1.7
3,474,859	-		CCNA_03300	0.61	-2.8
3,474,885	+		CCNA_03300	0.63	-2.2
3,474,885	+		CCNA_03300	0.63	-2.5
3,474,898	-		CCNA_03300	0.64	-1.0
3,474,910	+		CCNA_03300	0.65	-2.4
3,474,934	-		CCNA_03300	0.67	-2.3
3,474,947	-		CCNA_03300	0.69	+0.9
3,474,954	+		CCNA_03300	0.69	-0.4
3,474,996	-		CCNA_03300	0.73	-1.6
3,475,014	-		CCNA_03300	0.75	-3.2
3,475,074	+		CCNA_03300	0.80	-3.2
3,475,082	-		CCNA_03300	0.81	-1.3
3,475,093	+		CCNA_03300	0.82	-1.1
3,475,108	-		CCNA_03300	0.83	-2.6
3,475,175	-		CCNA_03300	0.89	-1.1
3,475,197	+				-2.2
3,475,197	+				-1.3
3,475,201	-				-1.9
3,475,205	-				-2.3