Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01062

Experiment: PYE with Benzethonium chloride 0.001 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzethonium chloride 0.001 mM
1,165,293	-		CCNA_01061	0.36	+0.9
1,165,367	+		CCNA_01061	0.42	+1.7
1,165,518	+		CCNA_01061	0.53	+2.9
1,165,526	-		CCNA_01061	0.54	+1.7
1,165,559	-		CCNA_01061	0.56	-1.4
1,165,559	-		CCNA_01061	0.56	-0.7
1,165,705	+		CCNA_01061	0.68	+2.5
1,165,713	-		CCNA_01061	0.68	+0.1
1,165,891	+		CCNA_01061	0.82	+0.9
1,166,068	+				+0.1
1,166,133	-				+0.2
1,166,137	+				+2.2
1,166,137	+				+2.0
1,166,154	-				+0.0
1,166,205	+				+1.1
1,166,230	+				+2.1
1,166,230	+				+1.9
1,166,238	-				-0.0
1,166,290	-				-1.6
1,166,308	+				+1.8
1,166,316	-				-2.0
1,166,316	-				+0.1
1,166,321	-				+0.3
1,166,338	+				+2.1
1,166,344	+				+1.8
1,166,344	+				+1.6
1,166,344	+				+2.5
1,166,344	+				+1.8
1,166,344	+				+1.2
1,166,352	-				-1.1
1,166,352	-				+0.3
1,166,352	-				-1.1
1,166,386	-		CCNA_01062	0.12	+0.5
1,166,420	-		CCNA_01062	0.15	+1.0
1,166,452	+		CCNA_01062	0.19	+2.2
1,166,468	+		CCNA_01062	0.20	+1.7
1,166,506	+		CCNA_01062	0.24	+2.0
1,166,507	+		CCNA_01062	0.24	+2.3
1,166,515	-		CCNA_01062	0.25	-0.9
1,166,522	+		CCNA_01062	0.26	+2.2
1,166,522	+		CCNA_01062	0.26	+2.0
1,166,522	+		CCNA_01062	0.26	+2.3
1,166,543	+		CCNA_01062	0.28	+2.0
1,166,579	+		CCNA_01062	0.32	+1.9
1,166,587	-		CCNA_01062	0.32	-3.2
1,166,599	+		CCNA_01062	0.34	+1.5
1,166,635	+		CCNA_01062	0.37	+1.1
1,166,667	+		CCNA_01062	0.41	+1.3
1,166,675	-		CCNA_01062	0.41	+0.7
1,166,675	-		CCNA_01062	0.41	-0.1
1,166,704	+		CCNA_01062	0.44	+1.4
1,166,712	-		CCNA_01062	0.45	-1.0
1,166,737	+		CCNA_01062	0.48	+2.1
1,166,737	+		CCNA_01062	0.48	+2.7
1,166,737	+		CCNA_01062	0.48	+2.2
1,166,737	+		CCNA_01062	0.48	+1.8
1,166,737	+		CCNA_01062	0.48	+2.1
1,166,737	+		CCNA_01062	0.48	+1.6
1,166,737	+		CCNA_01062	0.48	+2.1
1,166,737	+		CCNA_01062	0.48	+2.1
1,166,737	+		CCNA_01062	0.48	+2.1
1,166,745	-		CCNA_01062	0.49	+0.5
1,166,745	-		CCNA_01062	0.49	+0.3
1,166,745	-		CCNA_01062	0.49	-1.4
1,166,745	-		CCNA_01062	0.49	-2.8
1,166,751	+		CCNA_01062	0.49	+2.0
1,166,755	-		CCNA_01062	0.50	+1.0
1,166,759	-		CCNA_01062	0.50	+1.7
1,166,761	+		CCNA_01062	0.50	+1.7
1,166,775	+		CCNA_01062	0.52	+1.9
1,166,775	+		CCNA_01062	0.52	+1.8
1,166,775	+		CCNA_01062	0.52	+2.0
1,166,783	-		CCNA_01062	0.52	-0.9
1,166,898	+		CCNA_01062	0.64	+1.2
1,166,898	-		CCNA_01062	0.64	+1.0
1,166,934	-		CCNA_01062	0.68	-2.5
1,166,947	+		CCNA_01062	0.69	+2.7
1,166,947	+		CCNA_01062	0.69	+1.6
1,166,947	+		CCNA_01062	0.69	+1.3
1,166,947	+		CCNA_01062	0.69	+1.4
1,166,955	-		CCNA_01062	0.70	-0.5
1,166,955	-		CCNA_01062	0.70	-0.5
1,166,955	-		CCNA_01062	0.70	+0.6
1,166,955	-		CCNA_01062	0.70	+0.2
1,166,962	-		CCNA_01062	0.71	-0.7
1,166,988	-		CCNA_01062	0.73	+0.2
1,167,014	+		CCNA_01062	0.76	+2.1
1,167,019	+		CCNA_01062	0.77	+1.7
1,167,019	+		CCNA_01062	0.77	+1.4
1,167,019	+		CCNA_01062	0.77	+1.9
1,167,019	+		CCNA_01062	0.77	+1.6
1,167,019	+		CCNA_01062	0.77	+1.4
1,167,019	+		CCNA_01062	0.77	+0.9
1,167,019	+		CCNA_01062	0.77	+1.0
1,167,019	+		CCNA_01062	0.77	+1.7
1,167,019	+		CCNA_01062	0.77	+1.7
1,167,022	-		CCNA_01062	0.77	-2.7
1,167,027	-		CCNA_01062	0.77	-1.1
1,167,027	-		CCNA_01062	0.77	-1.3
1,167,027	-		CCNA_01062	0.77	-0.0
1,167,027	-		CCNA_01062	0.77	+1.3
1,167,027	-		CCNA_01062	0.77	-0.9
1,167,027	-		CCNA_01062	0.77	+1.3
1,167,027	-		CCNA_01062	0.77	-1.7
1,167,027	-		CCNA_01062	0.77	-2.0
1,167,027	-		CCNA_01062	0.77	-1.3
1,167,037	+		CCNA_01062	0.78	+1.9
1,167,039	+		CCNA_01062	0.79	+1.7
1,167,065	+		CCNA_01062	0.81	+2.0
1,167,083	-		CCNA_01062	0.83	-2.9
1,167,151	+				+1.9
1,167,151	+				+2.1
1,167,157	+				+1.6
1,167,157	+				+1.9
1,167,159	-				-0.7
1,167,299	+				+2.7
1,167,308	-				+2.0
1,167,308	-				+1.9
1,167,310	+				+2.8
1,167,382	+		CCNA_01063	0.21	+2.7
1,167,382	+		CCNA_01063	0.21	+2.7
1,167,382	+		CCNA_01063	0.21	+2.6
1,167,382	+		CCNA_01063	0.21	+2.3
1,167,382	+		CCNA_01063	0.21	+2.2
1,167,382	+		CCNA_01063	0.21	+2.3
1,167,390	-		CCNA_01063	0.22	+1.4
1,167,390	-		CCNA_01063	0.22	+0.1
1,167,390	-		CCNA_01063	0.22	-0.7
1,167,390	-		CCNA_01063	0.22	-0.8
1,167,390	-		CCNA_01063	0.22	+0.1
1,167,390	-		CCNA_01063	0.22	-0.5
1,167,390	-		CCNA_01063	0.22	+0.2
1,167,392	+		CCNA_01063	0.22	+2.6
1,167,400	-		CCNA_01063	0.24	-0.1
1,167,442	-		CCNA_01063	0.30	+2.5
1,167,442	-		CCNA_01063	0.30	+2.7
1,167,444	+		CCNA_01063	0.30	+2.4
1,167,444	+		CCNA_01063	0.30	+2.2
1,167,525	+		CCNA_01063	0.43	+2.6
1,167,533	-		CCNA_01063	0.44	-0.4
1,167,533	-		CCNA_01063	0.44	-0.2
1,167,533	-		CCNA_01063	0.44	-0.8
1,167,535	+		CCNA_01063	0.44	+2.9
1,167,543	-		CCNA_01063	0.46	-0.3
1,167,563	+		CCNA_01063	0.49	+2.5
1,167,571	-		CCNA_01063	0.50	+0.9
1,167,576	-		CCNA_01063	0.51	+0.5
1,167,576	-		CCNA_01063	0.51	-0.9
1,167,576	-		CCNA_01063	0.51	-0.6
1,167,589	+		CCNA_01063	0.53	+2.6
1,167,594	+		CCNA_01063	0.54	+2.7
1,167,621	-		CCNA_01063	0.58	-0.3
1,167,642	+		CCNA_01063	0.61	+2.7
1,167,656	-		CCNA_01063	0.63	-1.0
1,167,658	+		CCNA_01063	0.63	+2.5
1,167,666	-		CCNA_01063	0.65	+0.6
1,167,712	+		CCNA_01063	0.72	+2.4
1,167,712	+		CCNA_01063	0.72	+2.7
1,167,712	+		CCNA_01063	0.72	+2.7
1,167,720	-		CCNA_01063	0.73	-0.5
1,167,733	+		CCNA_01063	0.75	+2.4
1,167,765	-		CCNA_01063	0.80	-1.5
1,167,768	+		CCNA_01063	0.80	+2.4
1,167,776	-		CCNA_01063	0.82	+0.0
1,167,873	+				+0.6
1,167,873	+				+0.8
1,167,873	+				+0.7
1,167,873	+				-0.7
1,167,875	-				+0.3
1,167,881	-				-0.6
1,167,881	-				-1.4
1,167,881	-				+1.7
1,167,881	-				-1.2
1,167,942	+				+1.9
1,167,960	-				+0.3
1,167,975	+				+1.0
1,167,982	-				-3.1
1,167,990	+				+1.9
1,168,026	+		CCNA_01064	0.12	+0.7
1,168,075	-		CCNA_01064	0.16	-0.1
1,168,077	+		CCNA_01064	0.17	+0.5
1,168,078	+		CCNA_01064	0.17	+2.1
1,168,078	+		CCNA_01064	0.17	+1.1
1,168,078	+		CCNA_01064	0.17	+1.6
1,168,194	-		CCNA_01064	0.27	-1.5
1,168,216	+		CCNA_01064	0.29	+1.0
1,168,216	+		CCNA_01064	0.29	+1.4
1,168,224	-		CCNA_01064	0.30	-1.3
1,168,224	-		CCNA_01064	0.30	+1.3
1,168,224	-		CCNA_01064	0.30	-0.2
1,168,246	-		CCNA_01064	0.32	-0.9
1,168,246	-				+1.3