Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS20605

Experiment: Paraquat dichloride 0.05 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS20600 and ABZR86_RS20605 overlap by 4 nucleotidesABZR86_RS20605 and ABZR86_RS20610 are separated by 184 nucleotides ABZR86_RS20600: ABZR86_RS20600 - ferrous iron transporter B, at 69,575 to 71,431 _RS20600 ABZR86_RS20605: ABZR86_RS20605 - FeoA family protein, at 71,428 to 71,673 _RS20605 ABZR86_RS20610: ABZR86_RS20610 - enoyl-CoA hydratase-related protein, at 71,858 to 72,652 _RS20610 Position (kb) 71 72Strain fitness (log2 ratio) -1 0 1at 71.182 kb on - strand, within ABZR86_RS20600at 71.241 kb on + strand, within ABZR86_RS20600at 71.329 kb on - strandat 71.610 kb on + strand, within ABZR86_RS20605at 71.610 kb on + strand, within ABZR86_RS20605at 71.688 kb on + strandat 71.707 kb on - strandat 71.778 kb on - strandat 71.829 kb on + strandat 71.829 kb on + strandat 71.830 kb on - strandat 71.830 kb on - strandat 71.861 kb on + strandat 71.861 kb on + strandat 71.861 kb on + strandat 72.650 kb on + strandat 72.650 kb on + strandat 72.651 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Paraquat dichloride 0.05 mg/ml
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71,182 - ABZR86_RS20600 0.87 -1.5
71,241 + ABZR86_RS20600 0.90 -0.3
71,329 - -0.8
71,610 + ABZR86_RS20605 0.74 -0.9
71,610 + ABZR86_RS20605 0.74 -0.7
71,688 + -0.8
71,707 - -0.3
71,778 - -0.2
71,829 + +0.2
71,829 + -0.2
71,830 - -0.5
71,830 - +0.2
71,861 + +0.6
71,861 + +0.1
71,861 + +0.2
72,650 + +0.3
72,650 + +0.1
72,651 - -1.5

Or see this region's nucleotide sequence