Experiment: Paraquat dichloride 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS18755 and ABZR86_RS18760 overlap by 1 nucleotides ABZR86_RS18760 and ABZR86_RS18765 overlap by 4 nucleotides
ABZR86_RS18755: ABZR86_RS18755 - ABC transporter ATP-binding protein, at 177,073 to 178,476
_RS18755
ABZR86_RS18760: ABZR86_RS18760 - glycosyltransferase, at 178,476 to 181,841
_RS18760
ABZR86_RS18765: ABZR86_RS18765 - dehydrogenase, at 181,838 to 182,866
_RS18765
Position (kb) 178
179
180
181
182 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 178.546 kb on - strand at 178.691 kb on + strand at 178.691 kb on + strand at 178.691 kb on + strand at 178.692 kb on - strand at 178.695 kb on + strand at 178.989 kb on + strand, within ABZR86_RS18760 at 178.992 kb on + strand, within ABZR86_RS18760 at 178.993 kb on - strand, within ABZR86_RS18760 at 179.046 kb on - strand, within ABZR86_RS18760 at 179.057 kb on + strand, within ABZR86_RS18760 at 179.125 kb on - strand, within ABZR86_RS18760 at 179.209 kb on - strand, within ABZR86_RS18760 at 179.209 kb on - strand, within ABZR86_RS18760 at 179.209 kb on - strand, within ABZR86_RS18760 at 179.209 kb on - strand, within ABZR86_RS18760 at 179.209 kb on - strand, within ABZR86_RS18760 at 179.281 kb on - strand, within ABZR86_RS18760 at 179.944 kb on + strand, within ABZR86_RS18760 at 180.100 kb on - strand, within ABZR86_RS18760 at 180.171 kb on + strand, within ABZR86_RS18760 at 180.171 kb on + strand, within ABZR86_RS18760 at 180.177 kb on + strand, within ABZR86_RS18760 at 180.177 kb on + strand, within ABZR86_RS18760 at 180.178 kb on - strand, within ABZR86_RS18760 at 180.384 kb on + strand, within ABZR86_RS18760 at 180.385 kb on - strand, within ABZR86_RS18760 at 180.385 kb on - strand, within ABZR86_RS18760 at 180.385 kb on - strand, within ABZR86_RS18760 at 180.402 kb on + strand, within ABZR86_RS18760 at 180.471 kb on + strand, within ABZR86_RS18760 at 180.471 kb on + strand, within ABZR86_RS18760 at 180.471 kb on + strand, within ABZR86_RS18760 at 180.472 kb on - strand, within ABZR86_RS18760 at 180.483 kb on + strand, within ABZR86_RS18760 at 180.537 kb on + strand, within ABZR86_RS18760 at 180.537 kb on + strand, within ABZR86_RS18760 at 180.538 kb on - strand, within ABZR86_RS18760 at 180.538 kb on - strand, within ABZR86_RS18760 at 180.540 kb on + strand, within ABZR86_RS18760 at 180.541 kb on - strand, within ABZR86_RS18760 at 180.541 kb on - strand, within ABZR86_RS18760 at 180.615 kb on + strand, within ABZR86_RS18760 at 180.753 kb on + strand, within ABZR86_RS18760 at 180.754 kb on - strand, within ABZR86_RS18760 at 180.754 kb on - strand, within ABZR86_RS18760 at 180.874 kb on - strand, within ABZR86_RS18760 at 180.875 kb on + strand, within ABZR86_RS18760 at 180.945 kb on + strand, within ABZR86_RS18760 at 180.945 kb on + strand, within ABZR86_RS18760 at 181.059 kb on + strand, within ABZR86_RS18760 at 181.059 kb on + strand, within ABZR86_RS18760 at 181.060 kb on - strand, within ABZR86_RS18760 at 181.060 kb on - strand, within ABZR86_RS18760 at 181.122 kb on + strand, within ABZR86_RS18760 at 181.122 kb on + strand, within ABZR86_RS18760 at 181.123 kb on - strand, within ABZR86_RS18760 at 181.264 kb on - strand, within ABZR86_RS18760 at 181.426 kb on - strand, within ABZR86_RS18760 at 181.800 kb on - strand at 182.020 kb on - strand, within ABZR86_RS18765 at 182.360 kb on + strand, within ABZR86_RS18765 at 182.442 kb on - strand, within ABZR86_RS18765 at 182.718 kb on + strand, within ABZR86_RS18765
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.05 mg/ml remove 178,546 - -1.9 178,691 + -1.3 178,691 + -1.3 178,691 + +0.5 178,692 - -0.2 178,695 + -1.9 178,989 + ABZR86_RS18760 0.15 -0.2 178,992 + ABZR86_RS18760 0.15 -2.1 178,993 - ABZR86_RS18760 0.15 -0.2 179,046 - ABZR86_RS18760 0.17 -1.1 179,057 + ABZR86_RS18760 0.17 +0.1 179,125 - ABZR86_RS18760 0.19 -2.2 179,209 - ABZR86_RS18760 0.22 -0.7 179,209 - ABZR86_RS18760 0.22 -1.0 179,209 - ABZR86_RS18760 0.22 -0.6 179,209 - ABZR86_RS18760 0.22 -1.7 179,209 - ABZR86_RS18760 0.22 -1.6 179,281 - ABZR86_RS18760 0.24 -2.3 179,944 + ABZR86_RS18760 0.44 -1.0 180,100 - ABZR86_RS18760 0.48 -2.3 180,171 + ABZR86_RS18760 0.50 -1.1 180,171 + ABZR86_RS18760 0.50 -1.3 180,177 + ABZR86_RS18760 0.51 -1.9 180,177 + ABZR86_RS18760 0.51 -1.7 180,178 - ABZR86_RS18760 0.51 -0.8 180,384 + ABZR86_RS18760 0.57 -1.8 180,385 - ABZR86_RS18760 0.57 -1.6 180,385 - ABZR86_RS18760 0.57 -1.8 180,385 - ABZR86_RS18760 0.57 +0.3 180,402 + ABZR86_RS18760 0.57 -3.0 180,471 + ABZR86_RS18760 0.59 -1.2 180,471 + ABZR86_RS18760 0.59 -1.9 180,471 + ABZR86_RS18760 0.59 -0.7 180,472 - ABZR86_RS18760 0.59 -2.4 180,483 + ABZR86_RS18760 0.60 -1.8 180,537 + ABZR86_RS18760 0.61 -1.1 180,537 + ABZR86_RS18760 0.61 -1.4 180,538 - ABZR86_RS18760 0.61 -0.7 180,538 - ABZR86_RS18760 0.61 -2.5 180,540 + ABZR86_RS18760 0.61 +0.2 180,541 - ABZR86_RS18760 0.61 +0.2 180,541 - ABZR86_RS18760 0.61 -2.3 180,615 + ABZR86_RS18760 0.64 -1.8 180,753 + ABZR86_RS18760 0.68 -0.9 180,754 - ABZR86_RS18760 0.68 -0.5 180,754 - ABZR86_RS18760 0.68 -0.5 180,874 - ABZR86_RS18760 0.71 -1.1 180,875 + ABZR86_RS18760 0.71 -0.5 180,945 + ABZR86_RS18760 0.73 -1.4 180,945 + ABZR86_RS18760 0.73 -0.9 181,059 + ABZR86_RS18760 0.77 -0.1 181,059 + ABZR86_RS18760 0.77 -0.8 181,060 - ABZR86_RS18760 0.77 -1.3 181,060 - ABZR86_RS18760 0.77 -1.1 181,122 + ABZR86_RS18760 0.79 -0.9 181,122 + ABZR86_RS18760 0.79 -2.3 181,123 - ABZR86_RS18760 0.79 -0.9 181,264 - ABZR86_RS18760 0.83 -1.3 181,426 - ABZR86_RS18760 0.88 -0.6 181,800 - +0.5 182,020 - ABZR86_RS18765 0.18 -2.1 182,360 + ABZR86_RS18765 0.51 -0.6 182,442 - ABZR86_RS18765 0.59 -0.8 182,718 + ABZR86_RS18765 0.86 -0.2
Or see this region's nucleotide sequence