Experiment: Paraquat dichloride 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS18080 and ABZR86_RS18085 are separated by 195 nucleotides ABZR86_RS18085 and ABZR86_RS18090 are separated by 25 nucleotides ABZR86_RS18090 and ABZR86_RS18095 are separated by 3 nucleotides ABZR86_RS18095 and ABZR86_RS18100 are separated by 183 nucleotides ABZR86_RS18100 and ABZR86_RS18105 are separated by 10 nucleotides
ABZR86_RS18080: ABZR86_RS18080 - sulfotransferase, at 31,865 to 32,791
_RS18080
ABZR86_RS18085: ABZR86_RS18085 - putative toxin-antitoxin system toxin component, PIN family, at 32,987 to 33,463
_RS18085
ABZR86_RS18090: ABZR86_RS18090 - CPXCG motif-containing cysteine-rich protein, at 33,489 to 33,674
_RS18090
ABZR86_RS18095: ABZR86_RS18095 - bifunctional nicotinamidase/pyrazinamidase, at 33,678 to 34,328
_RS18095
ABZR86_RS18100: ABZR86_RS18100 - hypothetical protein, at 34,512 to 34,895
_RS18100
ABZR86_RS18105: ABZR86_RS18105 - prolyl oligopeptidase family serine peptidase, at 34,906 to 35,697
_RS18105
Position (kb) 33
34
35 Strain fitness (log2 ratio) -2
-1
0
1 at 32.912 kb on + strand at 33.023 kb on + strand at 33.478 kb on - strand at 33.507 kb on + strand at 33.507 kb on + strand at 33.507 kb on + strand at 33.507 kb on + strand at 33.508 kb on - strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.570 kb on + strand, within ABZR86_RS18090 at 33.571 kb on - strand, within ABZR86_RS18090 at 33.571 kb on - strand, within ABZR86_RS18090 at 33.571 kb on - strand, within ABZR86_RS18090 at 33.571 kb on - strand, within ABZR86_RS18090 at 33.571 kb on - strand, within ABZR86_RS18090 at 33.865 kb on + strand, within ABZR86_RS18095 at 33.865 kb on + strand, within ABZR86_RS18095 at 33.865 kb on + strand, within ABZR86_RS18095 at 33.865 kb on + strand, within ABZR86_RS18095 at 33.865 kb on + strand, within ABZR86_RS18095 at 33.866 kb on - strand, within ABZR86_RS18095 at 33.866 kb on - strand, within ABZR86_RS18095 at 33.958 kb on + strand, within ABZR86_RS18095 at 34.090 kb on + strand, within ABZR86_RS18095 at 34.090 kb on + strand, within ABZR86_RS18095 at 34.091 kb on - strand, within ABZR86_RS18095 at 34.365 kb on + strand at 34.475 kb on + strand at 34.475 kb on + strand at 34.475 kb on + strand at 34.476 kb on - strand at 34.476 kb on - strand at 34.476 kb on - strand at 34.476 kb on - strand at 34.476 kb on - strand at 34.476 kb on - strand at 34.491 kb on - strand at 34.507 kb on + strand at 34.507 kb on + strand at 34.508 kb on - strand at 34.518 kb on + strand at 34.600 kb on - strand, within ABZR86_RS18100 at 34.600 kb on - strand, within ABZR86_RS18100 at 34.600 kb on - strand, within ABZR86_RS18100 at 34.716 kb on + strand, within ABZR86_RS18100 at 34.716 kb on + strand, within ABZR86_RS18100 at 34.716 kb on + strand, within ABZR86_RS18100 at 34.717 kb on - strand, within ABZR86_RS18100 at 34.725 kb on + strand, within ABZR86_RS18100 at 34.726 kb on - strand, within ABZR86_RS18100 at 34.726 kb on - strand, within ABZR86_RS18100 at 34.726 kb on - strand, within ABZR86_RS18100 at 34.726 kb on - strand, within ABZR86_RS18100 at 34.726 kb on - strand, within ABZR86_RS18100 at 34.952 kb on - strand at 34.967 kb on + strand at 34.968 kb on - strand at 34.993 kb on + strand, within ABZR86_RS18105 at 34.993 kb on + strand, within ABZR86_RS18105 at 34.994 kb on - strand, within ABZR86_RS18105 at 35.012 kb on + strand, within ABZR86_RS18105 at 35.012 kb on + strand, within ABZR86_RS18105 at 35.012 kb on + strand, within ABZR86_RS18105 at 35.013 kb on - strand, within ABZR86_RS18105 at 35.075 kb on - strand, within ABZR86_RS18105 at 35.141 kb on + strand, within ABZR86_RS18105 at 35.141 kb on + strand, within ABZR86_RS18105 at 35.312 kb on + strand, within ABZR86_RS18105 at 35.312 kb on + strand, within ABZR86_RS18105 at 35.313 kb on - strand, within ABZR86_RS18105
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.05 mg/ml remove 32,912 + -0.9 33,023 + -0.1 33,478 - +0.0 33,507 + -0.4 33,507 + +0.0 33,507 + -0.4 33,507 + -0.5 33,508 - ABZR86_RS18090 0.10 +0.8 33,570 + ABZR86_RS18090 0.44 -0.1 33,570 + ABZR86_RS18090 0.44 +0.3 33,570 + ABZR86_RS18090 0.44 +0.1 33,570 + ABZR86_RS18090 0.44 -0.3 33,570 + ABZR86_RS18090 0.44 -0.3 33,570 + ABZR86_RS18090 0.44 +0.2 33,570 + ABZR86_RS18090 0.44 -0.5 33,570 + ABZR86_RS18090 0.44 -0.8 33,570 + ABZR86_RS18090 0.44 -0.7 33,570 + ABZR86_RS18090 0.44 +0.5 33,570 + ABZR86_RS18090 0.44 -0.2 33,570 + ABZR86_RS18090 0.44 -0.2 33,570 + ABZR86_RS18090 0.44 -0.2 33,571 - ABZR86_RS18090 0.44 -1.9 33,571 - ABZR86_RS18090 0.44 -0.0 33,571 - ABZR86_RS18090 0.44 +0.3 33,571 - ABZR86_RS18090 0.44 -0.9 33,571 - ABZR86_RS18090 0.44 -0.4 33,865 + ABZR86_RS18095 0.29 +0.0 33,865 + ABZR86_RS18095 0.29 -0.8 33,865 + ABZR86_RS18095 0.29 +0.4 33,865 + ABZR86_RS18095 0.29 +0.1 33,865 + ABZR86_RS18095 0.29 +0.3 33,866 - ABZR86_RS18095 0.29 -0.8 33,866 - ABZR86_RS18095 0.29 +0.3 33,958 + ABZR86_RS18095 0.43 -0.3 34,090 + ABZR86_RS18095 0.63 -1.1 34,090 + ABZR86_RS18095 0.63 -0.1 34,091 - ABZR86_RS18095 0.63 -0.1 34,365 + +0.2 34,475 + -0.3 34,475 + -0.4 34,475 + -1.2 34,476 - +0.2 34,476 - -0.2 34,476 - -1.2 34,476 - +0.2 34,476 - +1.3 34,476 - -0.5 34,491 - -0.1 34,507 + +0.4 34,507 + +0.6 34,508 - +0.4 34,518 + -0.6 34,600 - ABZR86_RS18100 0.23 +0.1 34,600 - ABZR86_RS18100 0.23 -0.8 34,600 - ABZR86_RS18100 0.23 -1.6 34,716 + ABZR86_RS18100 0.53 -0.0 34,716 + ABZR86_RS18100 0.53 -0.4 34,716 + ABZR86_RS18100 0.53 +0.2 34,717 - ABZR86_RS18100 0.53 -0.3 34,725 + ABZR86_RS18100 0.55 -0.5 34,726 - ABZR86_RS18100 0.56 +0.6 34,726 - ABZR86_RS18100 0.56 +0.3 34,726 - ABZR86_RS18100 0.56 -0.2 34,726 - ABZR86_RS18100 0.56 -1.1 34,726 - ABZR86_RS18100 0.56 -0.2 34,952 - -0.2 34,967 + -0.0 34,968 - -0.4 34,993 + ABZR86_RS18105 0.11 -0.5 34,993 + ABZR86_RS18105 0.11 -1.3 34,994 - ABZR86_RS18105 0.11 -1.1 35,012 + ABZR86_RS18105 0.13 +1.1 35,012 + ABZR86_RS18105 0.13 +0.3 35,012 + ABZR86_RS18105 0.13 -0.6 35,013 - ABZR86_RS18105 0.14 +0.1 35,075 - ABZR86_RS18105 0.21 -0.7 35,141 + ABZR86_RS18105 0.30 -0.5 35,141 + ABZR86_RS18105 0.30 +0.1 35,312 + ABZR86_RS18105 0.51 -0.1 35,312 + ABZR86_RS18105 0.51 -0.6 35,313 - ABZR86_RS18105 0.51 -0.2
Or see this region's nucleotide sequence