Experiment: Paraquat dichloride 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS13560 and ABZR86_RS13565 overlap by 53 nucleotides ABZR86_RS13565 and ABZR86_RS13570 overlap by 4 nucleotides ABZR86_RS13570 and ABZR86_RS13575 are separated by 71 nucleotides ABZR86_RS13575 and ABZR86_RS13580 are separated by 94 nucleotides
ABZR86_RS13560: ABZR86_RS13560 - LolA-related protein, at 3,036,852 to 3,037,493
_RS13560
ABZR86_RS13565: ABZR86_RS13565 - acyltransferase, at 3,037,441 to 3,038,394
_RS13565
ABZR86_RS13570: ABZR86_RS13570 - hydroxymyristoyl-ACP dehydratase, at 3,038,391 to 3,038,690
_RS13570
ABZR86_RS13575: ABZR86_RS13575 - phosphopantetheine-binding protein, at 3,038,762 to 3,039,034
_RS13575
ABZR86_RS13580: ABZR86_RS13580 - pteridine-dependent deoxygenase, at 3,039,129 to 3,040,121
_RS13580
Position (kb)
3038
3039 Strain fitness (log2 ratio)
-1
0
1
2 at 3037.517 kb on + strand at 3037.517 kb on + strand at 3037.533 kb on + strand at 3037.534 kb on - strand at 3037.534 kb on - strand at 3037.534 kb on - strand at 3037.534 kb on - strand at 3037.534 kb on - strand at 3037.535 kb on + strand at 3037.535 kb on + strand at 3037.535 kb on + strand at 3037.535 kb on + strand at 3037.535 kb on + strand at 3037.535 kb on + strand at 3037.536 kb on - strand at 3037.536 kb on - strand at 3037.553 kb on + strand, within ABZR86_RS13565 at 3037.553 kb on + strand, within ABZR86_RS13565 at 3037.553 kb on + strand, within ABZR86_RS13565 at 3037.553 kb on + strand, within ABZR86_RS13565 at 3037.553 kb on + strand, within ABZR86_RS13565 at 3037.553 kb on + strand, within ABZR86_RS13565 at 3037.553 kb on + strand, within ABZR86_RS13565 at 3037.553 kb on + strand, within ABZR86_RS13565 at 3037.553 kb on + strand, within ABZR86_RS13565 at 3037.553 kb on + strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.554 kb on - strand, within ABZR86_RS13565 at 3037.716 kb on + strand, within ABZR86_RS13565 at 3037.716 kb on + strand, within ABZR86_RS13565 at 3037.716 kb on + strand, within ABZR86_RS13565 at 3037.716 kb on + strand, within ABZR86_RS13565 at 3037.717 kb on - strand, within ABZR86_RS13565 at 3037.717 kb on - strand, within ABZR86_RS13565 at 3037.717 kb on - strand, within ABZR86_RS13565 at 3038.264 kb on + strand, within ABZR86_RS13565 at 3038.264 kb on + strand, within ABZR86_RS13565 at 3038.264 kb on + strand, within ABZR86_RS13565 at 3038.264 kb on + strand, within ABZR86_RS13565 at 3038.264 kb on + strand, within ABZR86_RS13565 at 3038.270 kb on + strand, within ABZR86_RS13565 at 3038.270 kb on + strand, within ABZR86_RS13565 at 3038.270 kb on + strand, within ABZR86_RS13565 at 3038.271 kb on - strand, within ABZR86_RS13565 at 3038.271 kb on - strand, within ABZR86_RS13565 at 3038.318 kb on + strand at 3038.331 kb on + strand at 3038.332 kb on - strand at 3038.332 kb on - strand at 3038.677 kb on + strand at 3038.677 kb on + strand at 3038.677 kb on + strand at 3038.677 kb on + strand at 3038.678 kb on - strand at 3038.678 kb on - strand at 3038.862 kb on + strand, within ABZR86_RS13575 at 3038.863 kb on - strand, within ABZR86_RS13575 at 3039.056 kb on + strand at 3039.056 kb on + strand at 3039.056 kb on + strand at 3039.057 kb on - strand at 3039.057 kb on - strand at 3039.057 kb on - strand at 3039.057 kb on - strand at 3039.057 kb on - strand at 3039.094 kb on + strand at 3039.094 kb on + strand at 3039.094 kb on + strand at 3039.094 kb on + strand at 3039.094 kb on + strand at 3039.094 kb on + strand at 3039.094 kb on + strand at 3039.094 kb on + strand at 3039.095 kb on - strand at 3039.095 kb on - strand at 3039.095 kb on - strand at 3039.095 kb on - strand at 3039.095 kb on - strand at 3039.095 kb on - strand at 3039.095 kb on - strand at 3039.095 kb on - strand at 3039.193 kb on - strand at 3039.193 kb on - strand at 3039.289 kb on - strand, within ABZR86_RS13580 at 3039.337 kb on + strand, within ABZR86_RS13580 at 3039.337 kb on + strand, within ABZR86_RS13580 at 3039.337 kb on + strand, within ABZR86_RS13580 at 3039.337 kb on + strand, within ABZR86_RS13580 at 3039.337 kb on + strand, within ABZR86_RS13580 at 3039.337 kb on + strand, within ABZR86_RS13580 at 3039.338 kb on - strand, within ABZR86_RS13580 at 3039.338 kb on - strand, within ABZR86_RS13580 at 3039.338 kb on - strand, within ABZR86_RS13580 at 3039.537 kb on + strand, within ABZR86_RS13580 at 3039.537 kb on + strand, within ABZR86_RS13580 at 3039.537 kb on + strand, within ABZR86_RS13580 at 3039.537 kb on + strand, within ABZR86_RS13580 at 3039.537 kb on + strand, within ABZR86_RS13580 at 3039.538 kb on - strand, within ABZR86_RS13580 at 3039.538 kb on - strand, within ABZR86_RS13580 at 3039.538 kb on - strand, within ABZR86_RS13580 at 3039.579 kb on + strand, within ABZR86_RS13580 at 3039.579 kb on + strand, within ABZR86_RS13580 at 3039.579 kb on + strand, within ABZR86_RS13580 at 3039.579 kb on + strand, within ABZR86_RS13580 at 3039.579 kb on + strand, within ABZR86_RS13580 at 3039.690 kb on + strand, within ABZR86_RS13580
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.05 mg/ml remove 3,037,517 + -0.6 3,037,517 + -0.3 3,037,533 + +0.2 3,037,534 - +1.0 3,037,534 - +0.7 3,037,534 - -0.6 3,037,534 - -0.4 3,037,534 - -0.9 3,037,535 + +0.1 3,037,535 + -0.3 3,037,535 + -0.5 3,037,535 + +0.5 3,037,535 + +1.8 3,037,535 + +0.5 3,037,536 - +0.8 3,037,536 - -0.2 3,037,553 + ABZR86_RS13565 0.12 +0.0 3,037,553 + ABZR86_RS13565 0.12 +0.4 3,037,553 + ABZR86_RS13565 0.12 +0.5 3,037,553 + ABZR86_RS13565 0.12 +0.8 3,037,553 + ABZR86_RS13565 0.12 -0.0 3,037,553 + ABZR86_RS13565 0.12 -0.1 3,037,553 + ABZR86_RS13565 0.12 +1.1 3,037,553 + ABZR86_RS13565 0.12 +0.3 3,037,553 + ABZR86_RS13565 0.12 +1.3 3,037,553 + ABZR86_RS13565 0.12 +0.0 3,037,554 - ABZR86_RS13565 0.12 -0.8 3,037,554 - ABZR86_RS13565 0.12 +1.2 3,037,554 - ABZR86_RS13565 0.12 -0.3 3,037,554 - ABZR86_RS13565 0.12 +1.5 3,037,554 - ABZR86_RS13565 0.12 +0.4 3,037,554 - ABZR86_RS13565 0.12 -0.7 3,037,554 - ABZR86_RS13565 0.12 -0.4 3,037,554 - ABZR86_RS13565 0.12 -0.1 3,037,554 - ABZR86_RS13565 0.12 -0.5 3,037,554 - ABZR86_RS13565 0.12 -0.0 3,037,554 - ABZR86_RS13565 0.12 +0.8 3,037,554 - ABZR86_RS13565 0.12 +0.3 3,037,554 - ABZR86_RS13565 0.12 -0.0 3,037,716 + ABZR86_RS13565 0.29 +0.2 3,037,716 + ABZR86_RS13565 0.29 -0.4 3,037,716 + ABZR86_RS13565 0.29 -0.0 3,037,716 + ABZR86_RS13565 0.29 -0.8 3,037,717 - ABZR86_RS13565 0.29 +0.1 3,037,717 - ABZR86_RS13565 0.29 +0.5 3,037,717 - ABZR86_RS13565 0.29 +0.3 3,038,264 + ABZR86_RS13565 0.86 +0.2 3,038,264 + ABZR86_RS13565 0.86 -1.4 3,038,264 + ABZR86_RS13565 0.86 +0.2 3,038,264 + ABZR86_RS13565 0.86 -0.1 3,038,264 + ABZR86_RS13565 0.86 +0.1 3,038,270 + ABZR86_RS13565 0.87 +1.5 3,038,270 + ABZR86_RS13565 0.87 -0.7 3,038,270 + ABZR86_RS13565 0.87 -0.3 3,038,271 - ABZR86_RS13565 0.87 -0.1 3,038,271 - ABZR86_RS13565 0.87 +0.0 3,038,318 + +0.9 3,038,331 + +0.7 3,038,332 - +0.1 3,038,332 - +0.2 3,038,677 + -0.5 3,038,677 + +0.1 3,038,677 + +0.1 3,038,677 + +1.3 3,038,678 - +0.3 3,038,678 - +0.5 3,038,862 + ABZR86_RS13575 0.37 +1.6 3,038,863 - ABZR86_RS13575 0.37 +0.5 3,039,056 + -0.2 3,039,056 + -1.2 3,039,056 + -0.5 3,039,057 - -0.4 3,039,057 - +0.3 3,039,057 - +0.9 3,039,057 - -0.1 3,039,057 - -0.1 3,039,094 + -1.3 3,039,094 + -0.3 3,039,094 + +0.1 3,039,094 + +0.8 3,039,094 + -0.3 3,039,094 + -0.3 3,039,094 + +0.5 3,039,094 + +0.4 3,039,095 - +0.1 3,039,095 - +1.1 3,039,095 - +0.4 3,039,095 - +0.1 3,039,095 - +0.2 3,039,095 - +0.3 3,039,095 - +0.3 3,039,095 - -0.1 3,039,193 - -0.1 3,039,193 - +0.2 3,039,289 - ABZR86_RS13580 0.16 +1.9 3,039,337 + ABZR86_RS13580 0.21 +0.4 3,039,337 + ABZR86_RS13580 0.21 +0.3 3,039,337 + ABZR86_RS13580 0.21 +0.1 3,039,337 + ABZR86_RS13580 0.21 +0.7 3,039,337 + ABZR86_RS13580 0.21 -0.1 3,039,337 + ABZR86_RS13580 0.21 -0.1 3,039,338 - ABZR86_RS13580 0.21 +0.4 3,039,338 - ABZR86_RS13580 0.21 -0.1 3,039,338 - ABZR86_RS13580 0.21 +0.4 3,039,537 + ABZR86_RS13580 0.41 +0.2 3,039,537 + ABZR86_RS13580 0.41 +0.9 3,039,537 + ABZR86_RS13580 0.41 +0.2 3,039,537 + ABZR86_RS13580 0.41 +0.8 3,039,537 + ABZR86_RS13580 0.41 -0.4 3,039,538 - ABZR86_RS13580 0.41 -0.1 3,039,538 - ABZR86_RS13580 0.41 +0.6 3,039,538 - ABZR86_RS13580 0.41 +0.3 3,039,579 + ABZR86_RS13580 0.45 +0.0 3,039,579 + ABZR86_RS13580 0.45 +0.1 3,039,579 + ABZR86_RS13580 0.45 -0.3 3,039,579 + ABZR86_RS13580 0.45 -0.5 3,039,579 + ABZR86_RS13580 0.45 +0.2 3,039,690 + ABZR86_RS13580 0.56 +0.5
Or see this region's nucleotide sequence