Experiment: Paraquat dichloride 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS07910 and ABZR86_RS07915 are separated by 28 nucleotides ABZR86_RS07915 and ABZR86_RS07920 are separated by 118 nucleotides ABZR86_RS07920 and ABZR86_RS07925 are separated by 168 nucleotides
ABZR86_RS07910: ABZR86_RS07910 - glutamate--tRNA ligase, at 1,757,292 to 1,758,692
_RS07910
ABZR86_RS07915: ABZR86_RS07915 - hypothetical protein, at 1,758,721 to 1,759,491
_RS07915
ABZR86_RS07920: ABZR86_RS07920 - DUF4399 domain-containing protein, at 1,759,610 to 1,760,044
_RS07920
ABZR86_RS07925: ABZR86_RS07925 - glycosyltransferase family 1 protein, at 1,760,213 to 1,761,373
_RS07925
Position (kb) 1758
1759
1760 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1758.874 kb on + strand, within ABZR86_RS07915 at 1758.940 kb on + strand, within ABZR86_RS07915 at 1758.940 kb on + strand, within ABZR86_RS07915 at 1758.940 kb on + strand, within ABZR86_RS07915 at 1758.940 kb on + strand, within ABZR86_RS07915 at 1758.941 kb on - strand, within ABZR86_RS07915 at 1758.941 kb on - strand, within ABZR86_RS07915 at 1759.003 kb on + strand, within ABZR86_RS07915 at 1759.003 kb on + strand, within ABZR86_RS07915 at 1759.004 kb on - strand, within ABZR86_RS07915 at 1759.004 kb on - strand, within ABZR86_RS07915 at 1759.094 kb on + strand, within ABZR86_RS07915 at 1759.094 kb on + strand, within ABZR86_RS07915 at 1759.094 kb on + strand, within ABZR86_RS07915 at 1759.094 kb on + strand, within ABZR86_RS07915 at 1759.094 kb on + strand, within ABZR86_RS07915 at 1759.094 kb on + strand, within ABZR86_RS07915 at 1759.094 kb on + strand, within ABZR86_RS07915 at 1759.094 kb on + strand, within ABZR86_RS07915 at 1759.094 kb on + strand, within ABZR86_RS07915 at 1759.094 kb on + strand, within ABZR86_RS07915 at 1759.095 kb on - strand, within ABZR86_RS07915 at 1759.095 kb on - strand, within ABZR86_RS07915 at 1759.095 kb on - strand, within ABZR86_RS07915 at 1759.095 kb on - strand, within ABZR86_RS07915 at 1759.095 kb on - strand, within ABZR86_RS07915 at 1759.095 kb on - strand, within ABZR86_RS07915 at 1759.095 kb on - strand, within ABZR86_RS07915 at 1759.095 kb on - strand, within ABZR86_RS07915 at 1759.168 kb on + strand, within ABZR86_RS07915 at 1759.226 kb on - strand, within ABZR86_RS07915 at 1759.226 kb on - strand, within ABZR86_RS07915 at 1759.285 kb on + strand, within ABZR86_RS07915 at 1759.286 kb on - strand, within ABZR86_RS07915 at 1759.312 kb on + strand, within ABZR86_RS07915 at 1759.313 kb on - strand, within ABZR86_RS07915 at 1759.313 kb on - strand, within ABZR86_RS07915 at 1759.313 kb on - strand, within ABZR86_RS07915 at 1759.313 kb on - strand, within ABZR86_RS07915 at 1759.313 kb on - strand, within ABZR86_RS07915 at 1759.477 kb on + strand at 1759.477 kb on + strand at 1759.477 kb on + strand at 1759.477 kb on + strand at 1759.477 kb on + strand at 1759.478 kb on - strand at 1759.500 kb on + strand at 1759.501 kb on - strand at 1759.501 kb on - strand at 1759.585 kb on + strand at 1759.585 kb on + strand at 1759.696 kb on + strand, within ABZR86_RS07920 at 1759.696 kb on + strand, within ABZR86_RS07920 at 1759.697 kb on - strand, within ABZR86_RS07920 at 1759.718 kb on + strand, within ABZR86_RS07920 at 1759.719 kb on - strand, within ABZR86_RS07920 at 1759.935 kb on + strand, within ABZR86_RS07920 at 1759.935 kb on + strand, within ABZR86_RS07920 at 1759.936 kb on - strand, within ABZR86_RS07920 at 1760.081 kb on + strand at 1760.081 kb on + strand at 1760.119 kb on + strand at 1760.123 kb on + strand at 1760.124 kb on - strand at 1760.124 kb on - strand at 1760.124 kb on - strand at 1760.135 kb on + strand at 1760.136 kb on - strand at 1760.187 kb on + strand at 1760.188 kb on - strand at 1760.188 kb on - strand at 1760.188 kb on - strand at 1760.188 kb on - strand at 1760.207 kb on - strand at 1760.240 kb on + strand at 1760.483 kb on + strand, within ABZR86_RS07925 at 1760.483 kb on + strand, within ABZR86_RS07925 at 1760.483 kb on + strand, within ABZR86_RS07925 at 1760.483 kb on + strand, within ABZR86_RS07925 at 1760.483 kb on + strand, within ABZR86_RS07925 at 1760.484 kb on - strand, within ABZR86_RS07925 at 1760.484 kb on - strand, within ABZR86_RS07925 at 1760.484 kb on - strand, within ABZR86_RS07925
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.05 mg/ml remove 1,758,874 + ABZR86_RS07915 0.20 +0.3 1,758,940 + ABZR86_RS07915 0.28 -1.0 1,758,940 + ABZR86_RS07915 0.28 -0.1 1,758,940 + ABZR86_RS07915 0.28 -0.2 1,758,940 + ABZR86_RS07915 0.28 -0.2 1,758,941 - ABZR86_RS07915 0.29 -0.3 1,758,941 - ABZR86_RS07915 0.29 -0.4 1,759,003 + ABZR86_RS07915 0.37 +0.0 1,759,003 + ABZR86_RS07915 0.37 -0.0 1,759,004 - ABZR86_RS07915 0.37 +0.1 1,759,004 - ABZR86_RS07915 0.37 -0.2 1,759,094 + ABZR86_RS07915 0.48 +0.1 1,759,094 + ABZR86_RS07915 0.48 +0.6 1,759,094 + ABZR86_RS07915 0.48 +0.2 1,759,094 + ABZR86_RS07915 0.48 -1.7 1,759,094 + ABZR86_RS07915 0.48 -0.3 1,759,094 + ABZR86_RS07915 0.48 +0.4 1,759,094 + ABZR86_RS07915 0.48 +0.2 1,759,094 + ABZR86_RS07915 0.48 -0.3 1,759,094 + ABZR86_RS07915 0.48 +0.7 1,759,094 + ABZR86_RS07915 0.48 -0.1 1,759,095 - ABZR86_RS07915 0.49 +0.7 1,759,095 - ABZR86_RS07915 0.49 -0.0 1,759,095 - ABZR86_RS07915 0.49 -0.1 1,759,095 - ABZR86_RS07915 0.49 -0.8 1,759,095 - ABZR86_RS07915 0.49 -0.3 1,759,095 - ABZR86_RS07915 0.49 +0.4 1,759,095 - ABZR86_RS07915 0.49 -0.0 1,759,095 - ABZR86_RS07915 0.49 -0.0 1,759,168 + ABZR86_RS07915 0.58 +1.0 1,759,226 - ABZR86_RS07915 0.65 -0.2 1,759,226 - ABZR86_RS07915 0.65 -0.1 1,759,285 + ABZR86_RS07915 0.73 -0.8 1,759,286 - ABZR86_RS07915 0.73 +0.2 1,759,312 + ABZR86_RS07915 0.77 -0.5 1,759,313 - ABZR86_RS07915 0.77 +0.8 1,759,313 - ABZR86_RS07915 0.77 -0.8 1,759,313 - ABZR86_RS07915 0.77 +0.6 1,759,313 - ABZR86_RS07915 0.77 +0.4 1,759,313 - ABZR86_RS07915 0.77 -0.3 1,759,477 + -1.0 1,759,477 + -0.3 1,759,477 + +0.0 1,759,477 + -2.3 1,759,477 + +0.5 1,759,478 - +0.2 1,759,500 + +0.1 1,759,501 - -0.2 1,759,501 - -0.1 1,759,585 + -0.2 1,759,585 + -0.2 1,759,696 + ABZR86_RS07920 0.20 -0.5 1,759,696 + ABZR86_RS07920 0.20 +2.0 1,759,697 - ABZR86_RS07920 0.20 -0.1 1,759,718 + ABZR86_RS07920 0.25 -0.8 1,759,719 - ABZR86_RS07920 0.25 +0.5 1,759,935 + ABZR86_RS07920 0.75 +0.3 1,759,935 + ABZR86_RS07920 0.75 -0.8 1,759,936 - ABZR86_RS07920 0.75 -0.7 1,760,081 + -0.1 1,760,081 + -0.3 1,760,119 + -0.2 1,760,123 + -0.1 1,760,124 - -0.5 1,760,124 - -0.1 1,760,124 - +0.2 1,760,135 + +0.3 1,760,136 - -0.1 1,760,187 + +0.2 1,760,188 - -1.0 1,760,188 - +0.5 1,760,188 - +0.1 1,760,188 - +0.0 1,760,207 - +1.7 1,760,240 + -0.3 1,760,483 + ABZR86_RS07925 0.23 +0.2 1,760,483 + ABZR86_RS07925 0.23 -0.3 1,760,483 + ABZR86_RS07925 0.23 -0.1 1,760,483 + ABZR86_RS07925 0.23 +0.8 1,760,483 + ABZR86_RS07925 0.23 +0.4 1,760,484 - ABZR86_RS07925 0.23 -0.4 1,760,484 - ABZR86_RS07925 0.23 -0.4 1,760,484 - ABZR86_RS07925 0.23 -0.2
Or see this region's nucleotide sequence