Strain Fitness in Sinorhizobium meliloti 1021 around SMc03965
Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,958,080 | - | SMc03964 | 0.12 | -2.8 | |
2,958,080 | - | SMc03964 | 0.12 | -0.3 | |
2,958,080 | - | SMc03964 | 0.12 | +0.7 | |
2,958,080 | - | SMc03964 | 0.12 | +1.6 | |
2,958,087 | + | SMc03964 | 0.13 | -3.7 | |
2,958,087 | + | SMc03964 | 0.13 | +0.6 | |
2,958,088 | - | SMc03964 | 0.13 | +0.6 | |
2,958,171 | - | SMc03964 | 0.22 | -0.8 | |
2,958,230 | + | SMc03964 | 0.29 | -1.0 | |
2,958,230 | + | SMc03964 | 0.29 | -3.3 | |
2,958,567 | + | SMc03964 | 0.66 | -0.0 | |
2,958,568 | - | SMc03964 | 0.66 | +0.5 | |
2,958,568 | - | SMc03964 | 0.66 | -2.8 | |
2,958,598 | - | SMc03964 | 0.69 | +0.3 | |
2,958,650 | + | SMc03964 | 0.75 | -0.4 | |
2,958,651 | - | SMc03964 | 0.75 | -0.7 | |
2,958,651 | - | SMc03964 | 0.75 | +0.4 | |
2,958,759 | + | SMc03964 | 0.87 | -0.3 | |
2,958,805 | - | +0.7 | |||
2,959,950 | + | +0.3 | |||
2,960,046 | + | -0.3 | |||
2,960,551 | + | SMc03966 | 0.75 | -1.5 | |
2,960,765 | - | -0.5 | |||
2,960,911 | + | SMc03967 | 0.26 | -2.1 | |
2,960,911 | + | SMc03967 | 0.26 | -1.3 | |
2,960,911 | + | SMc03967 | 0.26 | -0.3 |
Or see this region's nucleotide sequence