Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03295 and SMc03296 overlap by 4 nucleotides SMc03296 and SMc03297 are separated by 62 nucleotides
SMc03295: SMc03295 - transposase ISRM1, at 3,410,622 to 3,411,014
SMc03295
SMc03296: SMc03296 - transposase ISRM1, at 3,411,011 to 3,411,841
SMc03296
SMc03297: SMc03297 - hypothetical protein, at 3,411,904 to 3,412,512
SMc03297
Position (kb)
3411
3412
3413 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3411.910 kb on - strand at 3411.983 kb on + strand, within SMc03297 at 3411.984 kb on - strand, within SMc03297 at 3411.999 kb on - strand, within SMc03297 at 3412.021 kb on + strand, within SMc03297 at 3412.021 kb on + strand, within SMc03297 at 3412.021 kb on + strand, within SMc03297 at 3412.022 kb on - strand, within SMc03297 at 3412.026 kb on - strand, within SMc03297 at 3412.026 kb on - strand, within SMc03297 at 3412.026 kb on - strand, within SMc03297 at 3412.026 kb on - strand, within SMc03297 at 3412.096 kb on - strand, within SMc03297 at 3412.172 kb on - strand, within SMc03297 at 3412.232 kb on + strand, within SMc03297 at 3412.232 kb on + strand, within SMc03297 at 3412.232 kb on + strand, within SMc03297 at 3412.233 kb on - strand, within SMc03297 at 3412.233 kb on - strand, within SMc03297 at 3412.233 kb on - strand, within SMc03297 at 3412.333 kb on + strand, within SMc03297 at 3412.333 kb on + strand, within SMc03297 at 3412.334 kb on - strand, within SMc03297 at 3412.334 kb on - strand, within SMc03297 at 3412.456 kb on + strand at 3412.456 kb on + strand at 3412.456 kb on + strand at 3412.556 kb on - strand at 3412.557 kb on + strand at 3412.558 kb on - strand at 3412.558 kb on - strand at 3412.558 kb on - strand at 3412.669 kb on - strand at 3412.813 kb on - strand at 3412.818 kb on - strand at 3412.822 kb on + strand at 3412.854 kb on + strand at 3412.930 kb on - strand at 3412.930 kb on - strand at 3412.990 kb on - strand at 3412.990 kb on - strand at 3413.005 kb on + strand at 3413.006 kb on - strand at 3413.009 kb on + strand at 3413.050 kb on + strand at 3413.051 kb on - strand at 3413.051 kb on - strand at 3413.051 kb on - strand at 3413.051 kb on - strand at 3413.060 kb on + strand at 3413.116 kb on + strand at 3413.116 kb on + strand at 3413.117 kb on - strand at 3413.161 kb on + strand at 3413.196 kb on - strand at 3413.198 kb on + strand at 3413.277 kb on + strand at 3413.277 kb on + strand at 3413.277 kb on + strand at 3413.277 kb on + strand at 3413.277 kb on + strand at 3413.278 kb on - strand at 3413.281 kb on + strand at 3413.282 kb on - strand at 3413.511 kb on + strand at 3413.512 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 3,411,910 - -2.0 3,411,983 + SMc03297 0.13 -1.4 3,411,984 - SMc03297 0.13 -0.2 3,411,999 - SMc03297 0.16 +0.7 3,412,021 + SMc03297 0.19 -0.1 3,412,021 + SMc03297 0.19 -0.0 3,412,021 + SMc03297 0.19 +0.2 3,412,022 - SMc03297 0.19 -3.2 3,412,026 - SMc03297 0.20 -0.7 3,412,026 - SMc03297 0.20 -1.6 3,412,026 - SMc03297 0.20 +0.4 3,412,026 - SMc03297 0.20 -0.5 3,412,096 - SMc03297 0.32 -1.6 3,412,172 - SMc03297 0.44 -2.0 3,412,232 + SMc03297 0.54 -2.1 3,412,232 + SMc03297 0.54 +0.9 3,412,232 + SMc03297 0.54 -0.9 3,412,233 - SMc03297 0.54 +0.5 3,412,233 - SMc03297 0.54 -1.0 3,412,233 - SMc03297 0.54 -2.6 3,412,333 + SMc03297 0.70 -0.5 3,412,333 + SMc03297 0.70 +1.4 3,412,334 - SMc03297 0.71 +0.8 3,412,334 - SMc03297 0.71 -0.7 3,412,456 + -0.9 3,412,456 + -0.1 3,412,456 + -1.6 3,412,556 - -0.6 3,412,557 + +1.3 3,412,558 - -0.1 3,412,558 - +1.1 3,412,558 - -0.7 3,412,669 - +1.3 3,412,813 - -1.6 3,412,818 - -1.0 3,412,822 + +0.3 3,412,854 + -2.5 3,412,930 - +0.7 3,412,930 - +0.1 3,412,990 - -2.8 3,412,990 - -1.6 3,413,005 + -0.1 3,413,006 - +1.2 3,413,009 + +0.3 3,413,050 + +0.0 3,413,051 - -0.1 3,413,051 - +0.6 3,413,051 - +0.2 3,413,051 - +0.7 3,413,060 + +0.2 3,413,116 + -0.6 3,413,116 + +0.2 3,413,117 - +0.2 3,413,161 + +0.3 3,413,196 - -0.5 3,413,198 + +1.2 3,413,277 + -0.2 3,413,277 + -2.0 3,413,277 + +0.5 3,413,277 + -0.6 3,413,277 + +1.7 3,413,278 - -0.3 3,413,281 + +0.8 3,413,282 - +0.5 3,413,511 + +1.2 3,413,512 - +1.1
Or see this region's nucleotide sequence