Strain Fitness in Sinorhizobium meliloti 1021 around SMc02691
Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,540,097 | + | SMc02690 | 0.46 | -1.0 | |
2,540,098 | - | SMc02690 | 0.46 | -1.4 | |
2,540,160 | - | SMc02690 | 0.52 | +1.0 | |
2,540,348 | + | SMc02690 | 0.72 | +0.8 | |
2,540,348 | + | SMc02690 | 0.72 | -0.8 | |
2,540,581 | + | +0.6 | |||
2,540,582 | - | -0.2 | |||
2,540,764 | + | -0.1 | |||
2,540,765 | - | +0.2 | |||
2,540,778 | - | +0.8 | |||
2,540,782 | - | +0.9 | |||
2,540,782 | - | +0.1 | |||
2,540,782 | - | +2.0 | |||
2,540,782 | - | +0.3 | |||
2,540,783 | + | -1.5 | |||
2,540,783 | + | +1.6 | |||
2,540,784 | - | +0.7 | |||
2,540,784 | - | -1.5 | |||
2,540,784 | - | -1.5 | |||
2,540,817 | - | -0.6 | |||
2,540,858 | - | -1.6 | |||
2,540,893 | + | +0.0 | |||
2,540,894 | - | +1.2 | |||
2,540,894 | - | -2.1 | |||
2,540,894 | - | -0.4 | |||
2,540,894 | - | -0.5 | |||
2,540,894 | - | -0.9 | |||
2,540,905 | + | +0.2 | |||
2,540,906 | - | +0.9 | |||
2,541,442 | - | SMc02691 | 0.45 | +0.5 | |
2,541,493 | + | SMc02691 | 0.49 | -0.1 | |
2,541,493 | + | SMc02691 | 0.49 | -1.0 | |
2,541,494 | - | SMc02691 | 0.49 | +1.8 | |
2,541,666 | + | SMc02691 | 0.63 | -1.3 | |
2,541,667 | - | SMc02691 | 0.63 | +2.4 | |
2,541,667 | - | SMc02691 | 0.63 | -0.9 | |
2,541,844 | - | SMc02691 | 0.77 | +0.8 | |
2,541,844 | - | SMc02691 | 0.77 | +2.3 | |
2,542,112 | + | +0.2 |
Or see this region's nucleotide sequence