Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02637 and SMc02636 are separated by 5 nucleotides SMc02636 and SMc02635 are separated by 322 nucleotides SMc02635 and SMc02634 are separated by 305 nucleotides
SMc02637: SMc02637 - hypothetical protein, at 1,183,063 to 1,183,425
SMc02637
SMc02636: SMc02636 - hypothetical protein, at 1,183,431 to 1,184,036
SMc02636
SMc02635: SMc02635 - DNA repair protein RecO, at 1,184,359 to 1,185,138
SMc02635
SMc02634: SMc02634 - hypothetical protein, at 1,185,444 to 1,187,447
SMc02634
Position (kb)
1184
1185
1186 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 1183.424 kb on - strand at 1183.424 kb on - strand at 1183.424 kb on - strand at 1183.667 kb on - strand, within SMc02636 at 1183.673 kb on - strand, within SMc02636 at 1183.888 kb on + strand, within SMc02636 at 1183.946 kb on - strand, within SMc02636 at 1183.946 kb on - strand, within SMc02636 at 1183.946 kb on - strand, within SMc02636 at 1184.033 kb on - strand at 1184.033 kb on - strand at 1184.033 kb on - strand at 1184.047 kb on + strand at 1184.047 kb on + strand at 1184.171 kb on + strand at 1184.171 kb on + strand at 1184.172 kb on - strand at 1184.217 kb on - strand at 1184.268 kb on + strand at 1184.268 kb on + strand at 1184.268 kb on + strand at 1184.292 kb on + strand at 1184.383 kb on + strand at 1184.383 kb on + strand at 1184.383 kb on + strand at 1184.383 kb on + strand at 1184.383 kb on + strand at 1184.384 kb on - strand at 1184.417 kb on + strand at 1184.418 kb on - strand at 1184.660 kb on - strand, within SMc02635 at 1184.726 kb on - strand, within SMc02635 at 1184.878 kb on + strand, within SMc02635 at 1184.882 kb on + strand, within SMc02635 at 1184.883 kb on - strand, within SMc02635 at 1184.929 kb on + strand, within SMc02635 at 1185.025 kb on + strand, within SMc02635 at 1185.026 kb on - strand, within SMc02635 at 1185.026 kb on - strand, within SMc02635 at 1185.046 kb on + strand, within SMc02635 at 1185.046 kb on + strand, within SMc02635 at 1185.215 kb on - strand at 1185.873 kb on + strand, within SMc02634 at 1185.874 kb on - strand, within SMc02634 at 1186.015 kb on + strand, within SMc02634 at 1186.015 kb on + strand, within SMc02634 at 1186.016 kb on - strand, within SMc02634 at 1186.016 kb on - strand, within SMc02634
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 1,183,424 - +0.6 1,183,424 - -0.2 1,183,424 - +0.1 1,183,667 - SMc02636 0.39 -1.4 1,183,673 - SMc02636 0.40 +0.9 1,183,888 + SMc02636 0.75 +0.2 1,183,946 - SMc02636 0.85 +0.4 1,183,946 - SMc02636 0.85 -2.4 1,183,946 - SMc02636 0.85 +0.6 1,184,033 - +0.3 1,184,033 - -3.0 1,184,033 - -2.4 1,184,047 + +0.5 1,184,047 + -3.7 1,184,171 + -0.2 1,184,171 + +1.8 1,184,172 - +0.2 1,184,217 - +0.9 1,184,268 + -2.0 1,184,268 + +0.4 1,184,268 + -0.2 1,184,292 + -1.1 1,184,383 + +0.5 1,184,383 + -1.3 1,184,383 + -0.2 1,184,383 + +1.7 1,184,383 + +0.4 1,184,384 - -1.5 1,184,417 + -4.1 1,184,418 - -2.9 1,184,660 - SMc02635 0.39 -2.2 1,184,726 - SMc02635 0.47 -1.8 1,184,878 + SMc02635 0.67 -3.4 1,184,882 + SMc02635 0.67 -4.4 1,184,883 - SMc02635 0.67 -2.5 1,184,929 + SMc02635 0.73 -3.4 1,185,025 + SMc02635 0.85 -2.1 1,185,026 - SMc02635 0.86 -3.4 1,185,026 - SMc02635 0.86 -2.8 1,185,046 + SMc02635 0.88 -5.0 1,185,046 + SMc02635 0.88 -1.8 1,185,215 - -1.8 1,185,873 + SMc02634 0.21 -0.4 1,185,874 - SMc02634 0.21 +1.2 1,186,015 + SMc02634 0.28 +0.2 1,186,015 + SMc02634 0.28 +0.3 1,186,016 - SMc02634 0.29 -0.9 1,186,016 - SMc02634 0.29 -0.6
Or see this region's nucleotide sequence