Strain Fitness in Sinorhizobium meliloti 1021 around SMc02495
Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,298,606 | - | -1.0 | |||
3,299,221 | - | SMc02495 | 0.62 | +1.4 | |
3,299,282 | - | SMc02495 | 0.71 | -2.6 | |
3,299,614 | + | +0.6 | |||
3,299,615 | - | -1.2 | |||
3,299,700 | + | +0.2 | |||
3,299,701 | - | -0.9 | |||
3,299,782 | + | SMc02494 | 0.15 | +0.4 | |
3,299,900 | - | SMc02494 | 0.23 | -3.5 | |
3,299,953 | + | SMc02494 | 0.26 | +1.4 | |
3,299,953 | + | SMc02494 | 0.26 | +0.4 | |
3,299,953 | + | SMc02494 | 0.26 | +0.1 | |
3,299,953 | + | SMc02494 | 0.26 | -2.6 | |
3,299,975 | - | SMc02494 | 0.28 | -0.2 | |
3,300,036 | - | SMc02494 | 0.32 | -0.5 | |
3,300,121 | + | SMc02494 | 0.37 | +1.3 | |
3,300,149 | + | SMc02494 | 0.39 | -2.4 | |
3,300,149 | + | SMc02494 | 0.39 | +0.4 | |
3,300,149 | + | SMc02494 | 0.39 | +0.1 | |
3,300,149 | + | SMc02494 | 0.39 | -1.7 | |
3,300,149 | + | SMc02494 | 0.39 | +2.8 | |
3,300,149 | + | SMc02494 | 0.39 | -2.0 | |
3,300,150 | - | SMc02494 | 0.39 | -2.7 | |
3,300,379 | - | SMc02494 | 0.54 | +0.4 | |
3,300,469 | + | SMc02494 | 0.60 | +1.2 | |
3,300,469 | + | SMc02494 | 0.60 | +0.1 |
Or see this region's nucleotide sequence