Strain Fitness in Sinorhizobium meliloti 1021 around SMc01571
Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,513,202 | - | SMc01570 | 0.14 | +0.3 | |
2,513,447 | - | SMc01570 | 0.42 | -0.5 | |
2,513,447 | - | SMc01570 | 0.42 | +0.9 | |
2,514,085 | + | +0.2 | |||
2,514,085 | + | +0.3 | |||
2,514,086 | - | -1.1 | |||
2,514,156 | - | SMc01571 | 0.10 | -0.4 | |
2,514,173 | + | SMc01571 | 0.13 | +0.5 | |
2,514,173 | + | SMc01571 | 0.13 | +0.5 | |
2,514,173 | + | SMc01571 | 0.13 | +2.3 | |
2,514,173 | + | SMc01571 | 0.13 | -1.1 | |
2,514,174 | - | SMc01571 | 0.13 | +0.2 | |
2,514,386 | - | SMc01571 | 0.41 | -2.3 | |
2,514,386 | - | SMc01571 | 0.41 | -3.2 | |
2,514,386 | - | SMc01571 | 0.41 | -0.5 | |
2,514,386 | - | SMc01571 | 0.41 | -2.4 | |
2,514,524 | - | SMc01571 | 0.59 | -0.3 | |
2,514,592 | - | SMc01571 | 0.68 | -0.4 | |
2,514,627 | + | SMc01571 | 0.72 | -1.6 | |
2,514,627 | + | SMc01571 | 0.72 | -1.5 | |
2,514,628 | - | SMc01571 | 0.72 | -0.3 | |
2,514,936 | + | SMc01572 | 0.16 | -1.9 | |
2,515,295 | + | +1.7 | |||
2,515,352 | + | -0.2 | |||
2,515,359 | + | +0.1 | |||
2,515,359 | + | +2.0 | |||
2,515,360 | - | -0.5 | |||
2,515,360 | - | -0.2 | |||
2,515,379 | + | SMc01577 | 0.10 | -1.4 | |
2,515,380 | - | SMc01577 | 0.10 | -0.2 |
Or see this region's nucleotide sequence