Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00866 and SMc00865 are separated by 178 nucleotides SMc00865 and SMc00864 are separated by 137 nucleotides
SMc00866: SMc00866 - hypothetical protein, at 920,391 to 921,548
SMc00866
SMc00865: SMc00865 - hypothetical protein, at 921,727 to 922,278
SMc00865
SMc00864: SMc00864 - hypothetical protein, at 922,416 to 923,495
SMc00864
Position (kb) 921
922
923 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 920.814 kb on + strand, within SMc00866 at 921.096 kb on - strand, within SMc00866 at 921.098 kb on - strand, within SMc00866 at 921.191 kb on + strand, within SMc00866 at 921.191 kb on + strand, within SMc00866 at 921.192 kb on - strand, within SMc00866 at 921.193 kb on + strand, within SMc00866 at 921.193 kb on + strand, within SMc00866 at 921.193 kb on + strand, within SMc00866 at 921.194 kb on - strand, within SMc00866 at 921.204 kb on - strand, within SMc00866 at 921.204 kb on - strand, within SMc00866 at 921.220 kb on + strand, within SMc00866 at 921.220 kb on + strand, within SMc00866 at 921.221 kb on - strand, within SMc00866 at 921.221 kb on - strand, within SMc00866 at 921.694 kb on - strand at 921.694 kb on - strand at 921.717 kb on - strand at 921.727 kb on - strand at 921.827 kb on + strand, within SMc00865 at 921.828 kb on - strand, within SMc00865 at 921.830 kb on + strand, within SMc00865 at 921.831 kb on - strand, within SMc00865 at 922.057 kb on - strand, within SMc00865 at 922.057 kb on - strand, within SMc00865 at 922.057 kb on - strand, within SMc00865 at 922.276 kb on + strand at 922.326 kb on + strand at 922.327 kb on - strand at 922.331 kb on + strand at 922.332 kb on - strand at 922.522 kb on + strand at 922.522 kb on + strand at 922.523 kb on - strand at 922.523 kb on - strand at 922.771 kb on + strand, within SMc00864 at 922.827 kb on + strand, within SMc00864 at 922.828 kb on - strand, within SMc00864 at 922.829 kb on + strand, within SMc00864 at 922.829 kb on + strand, within SMc00864 at 922.830 kb on - strand, within SMc00864 at 922.830 kb on - strand, within SMc00864 at 922.862 kb on - strand, within SMc00864 at 922.907 kb on + strand, within SMc00864 at 922.908 kb on - strand, within SMc00864 at 922.908 kb on - strand, within SMc00864 at 923.074 kb on + strand, within SMc00864 at 923.074 kb on + strand, within SMc00864 at 923.177 kb on - strand, within SMc00864 at 923.186 kb on + strand, within SMc00864 at 923.187 kb on - strand, within SMc00864
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 920,814 + SMc00866 0.37 -0.2 921,096 - SMc00866 0.61 -1.9 921,098 - SMc00866 0.61 +1.0 921,191 + SMc00866 0.69 -0.9 921,191 + SMc00866 0.69 -1.2 921,192 - SMc00866 0.69 +2.0 921,193 + SMc00866 0.69 -0.3 921,193 + SMc00866 0.69 +1.8 921,193 + SMc00866 0.69 +1.7 921,194 - SMc00866 0.69 -0.9 921,204 - SMc00866 0.70 +0.3 921,204 - SMc00866 0.70 +0.4 921,220 + SMc00866 0.72 +0.7 921,220 + SMc00866 0.72 -0.9 921,221 - SMc00866 0.72 +0.4 921,221 - SMc00866 0.72 +0.8 921,694 - -1.3 921,694 - -2.0 921,717 - -0.3 921,727 - +0.4 921,827 + SMc00865 0.18 +1.5 921,828 - SMc00865 0.18 -0.3 921,830 + SMc00865 0.19 +1.8 921,831 - SMc00865 0.19 +2.3 922,057 - SMc00865 0.60 +0.3 922,057 - SMc00865 0.60 +1.0 922,057 - SMc00865 0.60 -0.3 922,276 + -0.1 922,326 + -0.9 922,327 - -2.5 922,331 + -1.3 922,332 - -0.1 922,522 + -0.1 922,522 + -0.4 922,523 - +3.9 922,523 - +3.1 922,771 + SMc00864 0.33 +0.6 922,827 + SMc00864 0.38 -1.4 922,828 - SMc00864 0.38 +0.2 922,829 + SMc00864 0.38 +0.6 922,829 + SMc00864 0.38 +1.1 922,830 - SMc00864 0.38 +0.7 922,830 - SMc00864 0.38 +0.2 922,862 - SMc00864 0.41 -0.7 922,907 + SMc00864 0.45 +0.9 922,908 - SMc00864 0.46 -1.3 922,908 - SMc00864 0.46 -1.0 923,074 + SMc00864 0.61 +0.6 923,074 + SMc00864 0.61 -1.5 923,177 - SMc00864 0.70 +0.1 923,186 + SMc00864 0.71 -0.8 923,187 - SMc00864 0.71 -0.4
Or see this region's nucleotide sequence