Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00740 and SMc00739 overlap by 1 nucleotides SMc00739 and SMc00759 are separated by 61 nucleotides SMc00759 and SMc00738 are separated by 318 nucleotides SMc00738 and SMc00737 are separated by 31 nucleotides SMc00737 and SMc00736 are separated by 105 nucleotides
SMc00740: SMc00740 - hypothetical protein, at 2,842,713 to 2,842,997
SMc00740
SMc00739: SMc00739 - hypothetical protein, at 2,842,997 to 2,843,479
SMc00739
SMc00759: SMc00759 - tRNA-Leu, at 2,843,541 to 2,843,625
SMc00759
SMc00738: SMc00738 - hypothetical protein, at 2,843,944 to 2,844,453
SMc00738
SMc00737: SMc00737 - hypothetical protein, at 2,844,485 to 2,845,042
SMc00737
SMc00736: SMc00736 - DNA-3-methyladenine DNA glycosylase, at 2,845,148 to 2,845,795
SMc00736
Position (kb)
2843
2844
2845 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2843.037 kb on + strand at 2843.126 kb on + strand, within SMc00739 at 2843.126 kb on + strand, within SMc00739 at 2843.126 kb on + strand, within SMc00739 at 2843.126 kb on + strand, within SMc00739 at 2843.126 kb on + strand, within SMc00739 at 2843.126 kb on + strand, within SMc00739 at 2843.127 kb on - strand, within SMc00739 at 2843.127 kb on - strand, within SMc00739 at 2843.132 kb on - strand, within SMc00739 at 2843.162 kb on + strand, within SMc00739 at 2843.163 kb on - strand, within SMc00739 at 2843.163 kb on - strand, within SMc00739 at 2843.264 kb on - strand, within SMc00739 at 2843.770 kb on + strand at 2843.771 kb on - strand at 2843.850 kb on + strand at 2843.871 kb on + strand at 2843.871 kb on + strand at 2843.871 kb on + strand at 2844.451 kb on + strand at 2844.487 kb on - strand at 2844.516 kb on + strand at 2844.517 kb on - strand at 2844.566 kb on - strand, within SMc00737 at 2844.594 kb on + strand, within SMc00737 at 2844.595 kb on - strand, within SMc00737 at 2844.597 kb on - strand, within SMc00737 at 2844.756 kb on + strand, within SMc00737 at 2844.756 kb on + strand, within SMc00737 at 2844.829 kb on - strand, within SMc00737 at 2844.829 kb on - strand, within SMc00737 at 2844.829 kb on - strand, within SMc00737 at 2844.829 kb on - strand at 2844.985 kb on + strand, within SMc00737 at 2844.988 kb on - strand at 2845.079 kb on + strand at 2845.079 kb on + strand at 2845.081 kb on + strand at 2845.082 kb on - strand at 2845.084 kb on + strand at 2845.084 kb on + strand at 2845.085 kb on - strand at 2845.129 kb on - strand at 2845.129 kb on - strand at 2845.191 kb on + strand at 2845.191 kb on + strand at 2845.191 kb on + strand at 2845.191 kb on + strand at 2845.194 kb on + strand at 2845.195 kb on - strand at 2845.206 kb on - strand at 2845.368 kb on + strand, within SMc00736 at 2845.368 kb on + strand, within SMc00736 at 2845.369 kb on - strand, within SMc00736 at 2845.369 kb on - strand, within SMc00736
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 2,843,037 + -0.3 2,843,126 + SMc00739 0.27 +0.3 2,843,126 + SMc00739 0.27 -0.4 2,843,126 + SMc00739 0.27 -0.2 2,843,126 + SMc00739 0.27 +1.3 2,843,126 + SMc00739 0.27 +1.0 2,843,126 + SMc00739 0.27 +0.5 2,843,127 - SMc00739 0.27 -1.6 2,843,127 - SMc00739 0.27 -2.6 2,843,132 - SMc00739 0.28 -1.1 2,843,162 + SMc00739 0.34 +0.3 2,843,163 - SMc00739 0.34 +0.7 2,843,163 - SMc00739 0.34 -1.8 2,843,264 - SMc00739 0.55 +1.2 2,843,770 + +1.1 2,843,771 - +0.3 2,843,850 + +0.2 2,843,871 + -0.9 2,843,871 + -0.0 2,843,871 + -1.2 2,844,451 + -1.0 2,844,487 - -0.2 2,844,516 + -1.2 2,844,517 - -1.2 2,844,566 - SMc00737 0.15 +0.2 2,844,594 + SMc00737 0.20 +0.4 2,844,595 - SMc00737 0.20 +0.9 2,844,597 - SMc00737 0.20 +0.9 2,844,756 + SMc00737 0.49 -2.1 2,844,756 + SMc00737 0.49 -0.0 2,844,829 - SMc00737 0.62 +0.2 2,844,829 - SMc00737 0.62 +0.6 2,844,829 - SMc00737 0.62 -0.2 2,844,829 - +1.3 2,844,985 + SMc00737 0.90 -3.7 2,844,988 - -0.3 2,845,079 + -1.6 2,845,079 + -1.5 2,845,081 + +0.4 2,845,082 - +0.1 2,845,084 + +0.4 2,845,084 + +0.4 2,845,085 - +0.4 2,845,129 - -0.2 2,845,129 - +0.4 2,845,191 + +0.2 2,845,191 + -2.2 2,845,191 + +0.3 2,845,191 + +0.2 2,845,194 + +1.6 2,845,195 - -0.2 2,845,206 - -0.8 2,845,368 + SMc00736 0.34 -0.3 2,845,368 + SMc00736 0.34 -3.1 2,845,369 - SMc00736 0.34 +2.1 2,845,369 - SMc00736 0.34 -0.2
Or see this region's nucleotide sequence