Strain Fitness in Sinorhizobium meliloti 1021 around SMc00181
Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,982,362 | + | SMc00196 | 0.45 | -3.7 | |
1,982,363 | - | SMc00196 | 0.45 | -1.7 | |
1,982,751 | + | SMc00196 | 0.80 | -1.6 | |
1,982,848 | - | SMc00196 | 0.88 | -3.2 | |
1,982,910 | + | -0.8 | |||
1,982,910 | + | +0.3 | |||
1,983,121 | + | -1.3 | |||
1,983,122 | - | +0.4 | |||
1,983,122 | - | +0.2 | |||
1,983,122 | - | +1.2 | |||
1,983,264 | - | SMc00181 | 0.32 | -2.3 | |
1,983,430 | + | -1.5 | |||
1,983,448 | + | +0.9 | |||
1,983,448 | + | +0.9 | |||
1,983,448 | + | -0.8 | |||
1,983,466 | - | -3.1 | |||
1,983,483 | - | -0.8 | |||
1,983,483 | - | -0.4 | |||
1,983,483 | - | -0.5 | |||
1,983,574 | + | -0.0 |
Or see this region's nucleotide sequence